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testgroup
pytensor
Commits
f3e98cb7
提交
f3e98cb7
authored
5月 07, 2014
作者:
Caglar
提交者:
Tanjay94
6月 04, 2014
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Fixed bugs in A_Xinv_b.
上级
cd1b4a21
隐藏空白字符变更
内嵌
并排
正在显示
1 个修改的文件
包含
32 行增加
和
54 行删除
+32
-54
ops.py
theano/sandbox/linalg/ops.py
+32
-54
没有找到文件。
theano/sandbox/linalg/ops.py
浏览文件 @
f3e98cb7
...
@@ -489,7 +489,8 @@ class MatrixPinv(Op):
...
@@ -489,7 +489,8 @@ class MatrixPinv(Op):
:math:`Ax = b`," i.e., if :math:`
\\
bar{x}` is said solution, then
:math:`Ax = b`," i.e., if :math:`
\\
bar{x}` is said solution, then
:math:`A^+` is that matrix such that :math:`
\\
bar{x} = A^+b`.
:math:`A^+` is that matrix such that :math:`
\\
bar{x} = A^+b`.
Note that :math:`Ax=AA^+b`, so :math:`AA^+` is close to the identity matrix.
Note that :math:`Ax=AA^+b`, so :math:`AA^+` is close to the identity
matrix.
This method is not faster then `matrix_inverse`. Its strength comes from
This method is not faster then `matrix_inverse`. Its strength comes from
that it works for non-square matrices.
that it works for non-square matrices.
If you have a square matrix though, `matrix_inverse` can be both more
If you have a square matrix though, `matrix_inverse` can be both more
...
@@ -519,14 +520,10 @@ class MatrixPinv(Op):
...
@@ -519,14 +520,10 @@ class MatrixPinv(Op):
return
Apply
(
self
,
[
x
],
[
x
.
type
()])
return
Apply
(
self
,
[
x
],
[
x
.
type
()])
def
perform
(
self
,
node
,
(
x
,),
(
z
,
)):
def
perform
(
self
,
node
,
(
x
,),
(
z
,
)):
try
:
if
imported_scipy
:
if
imported_scipy
:
z
[
0
]
=
scipy
.
linalg
.
pinv
(
x
)
.
astype
(
x
.
dtype
)
z
[
0
]
=
scipy
.
linalg
.
pinv
(
x
)
.
astype
(
x
.
dtype
)
else
:
else
:
z
[
0
]
=
numpy
.
linalg
.
pinv
(
x
)
.
astype
(
x
.
dtype
)
z
[
0
]
=
numpy
.
linalg
.
pinv
(
x
)
.
astype
(
x
.
dtype
)
except
numpy
.
linalg
.
LinAlgError
:
logger
.
debug
(
'Failed to invert
%
s'
%
str
(
node
.
inputs
[
0
]))
raise
def
__str__
(
self
):
def
__str__
(
self
):
return
"MatrixPseudoInverse"
return
"MatrixPseudoInverse"
...
@@ -857,6 +854,7 @@ def spectral_radius_bound(X, log2_exponent):
...
@@ -857,6 +854,7 @@ def spectral_radius_bound(X, log2_exponent):
if
log2_exponent
<=
0
:
if
log2_exponent
<=
0
:
raise
ValueError
(
'spectral_radius_bound requires a strictly positive '
raise
ValueError
(
'spectral_radius_bound requires a strictly positive '
'exponent'
,
log2_exponent
)
'exponent'
,
log2_exponent
)
XX
=
X
XX
=
X
for
i
in
xrange
(
log2_exponent
):
for
i
in
xrange
(
log2_exponent
):
XX
=
tensor
.
dot
(
XX
,
XX
)
XX
=
tensor
.
dot
(
XX
,
XX
)
...
@@ -876,7 +874,7 @@ class A_Xinv_b(Op):
...
@@ -876,7 +874,7 @@ class A_Xinv_b(Op):
assert
a
.
ndim
==
2
assert
a
.
ndim
==
2
assert
X
.
ndim
==
2
assert
X
.
ndim
==
2
assert
b
.
ndim
==
2
assert
b
.
ndim
==
2
o
=
theano
.
tensor
.
matrix
(
dtype
=
x
.
dtype
)
o
=
theano
.
tensor
.
matrix
(
dtype
=
X
.
dtype
)
return
Apply
(
self
,
[
a
,
X
,
b
],
[
o
])
return
Apply
(
self
,
[
a
,
X
,
b
],
[
o
])
def
perform
(
self
,
ndoe
,
inputs
,
outstor
):
def
perform
(
self
,
ndoe
,
inputs
,
outstor
):
...
@@ -896,7 +894,7 @@ class A_Xinv_b(Op):
...
@@ -896,7 +894,7 @@ class A_Xinv_b(Op):
iX
=
matrix_inverse
(
X
)
iX
=
matrix_inverse
(
X
)
ga
=
matrix_dot
(
gz
,
b
.
T
,
iX
.
T
)
ga
=
matrix_dot
(
gz
,
b
.
T
,
iX
.
T
)
gX
=
-
matrix_dot
(
iX
.
T
,
a
,
gz
,
b
.
T
,
iX
.
T
)
gX
=
-
matrix_dot
(
iX
.
T
,
a
,
gz
,
b
.
T
,
iX
.
T
)
gb
=
matrix_dot
(
i
x
.
T
,
a
.
T
,
gz
)
gb
=
matrix_dot
(
i
X
.
T
,
a
.
T
,
gz
)
return
[
ga
,
gX
,
gb
]
return
[
ga
,
gX
,
gb
]
...
@@ -928,12 +926,7 @@ class Eig(Op):
...
@@ -928,12 +926,7 @@ class Eig(Op):
return
Apply
(
self
,
[
x
],
[
w
,
v
])
return
Apply
(
self
,
[
x
],
[
w
,
v
])
def
perform
(
self
,
node
,
(
x
,),
(
w
,
v
)):
def
perform
(
self
,
node
,
(
x
,),
(
w
,
v
)):
try
:
w
[
0
],
v
[
0
]
=
[
z
.
astype
(
x
.
dtype
)
for
z
in
self
.
_numop
(
x
)]
w
[
0
],
v
[
0
]
=
[
z
.
astype
(
x
.
dtype
)
for
z
in
self
.
_numop
(
x
)]
except
numpy
.
linalg
.
LinAlgError
:
logger
.
debug
(
'Failed to find
%
s of
%
s'
%
(
self
.
_numop
.
__name__
,
node
.
inputs
[
0
]))
raise
def
infer_shape
(
self
,
node
,
shapes
):
def
infer_shape
(
self
,
node
,
shapes
):
n
=
shapes
[
0
][
0
]
n
=
shapes
[
0
][
0
]
...
@@ -987,15 +980,10 @@ class SVD(Op):
...
@@ -987,15 +980,10 @@ class SVD(Op):
return
Apply
(
self
,
[
x
],
[
w
,
u
,
v
])
return
Apply
(
self
,
[
x
],
[
w
,
u
,
v
])
def
perform
(
self
,
node
,
(
x
,),
(
w
,
u
,
v
)):
def
perform
(
self
,
node
,
(
x
,),
(
w
,
u
,
v
)):
try
:
assert
x
.
ndim
==
2
,
"The input of svd function should be a matrix."
assert
x
.
ndim
==
2
,
"The input of svd function should be a matrix."
w
[
0
],
u
[
0
],
v
[
0
]
=
self
.
_numop
(
x
,
w
[
0
],
u
[
0
],
v
[
0
]
=
self
.
_numop
(
x
,
self
.
full_matrices
,
self
.
full_matrices
,
self
.
compute_uv
)
self
.
compute_uv
)
except
numpy
.
linalg
.
LinAlgError
:
logger
.
debug
(
'Failed to find
%
s of
%
s'
%
(
self
.
_numop
.
__name__
,
node
.
inputs
[
0
]))
raise
def
__str__
(
self
):
def
__str__
(
self
):
return
self
.
_numop
.
__name__
.
capitalize
()
return
self
.
_numop
.
__name__
.
capitalize
()
...
@@ -1006,7 +994,8 @@ def svd(a, full_matrices=1, compute_uv=1):
...
@@ -1006,7 +994,8 @@ def svd(a, full_matrices=1, compute_uv=1):
This function performs the SVD on CPU.
This function performs the SVD on CPU.
Parameters :
Parameters :
--------
------------
full_matrices : bool, optional
full_matrices : bool, optional
If True (default), u and v have the shapes (M, M) and (N, N),
If True (default), u and v have the shapes (M, M) and (N, N),
respectively.
respectively.
...
@@ -1015,6 +1004,10 @@ def svd(a, full_matrices=1, compute_uv=1):
...
@@ -1015,6 +1004,10 @@ def svd(a, full_matrices=1, compute_uv=1):
compute_uv : bool, optional
compute_uv : bool, optional
Whether or not to compute u and v in addition to s.
Whether or not to compute u and v in addition to s.
True by default.
True by default.
Returns :
-------
U, V and D matrices.
"""
"""
return
SVD
(
full_matrices
,
compute_uv
)(
a
)
return
SVD
(
full_matrices
,
compute_uv
)(
a
)
...
@@ -1048,21 +1041,17 @@ class QRFull(Op):
...
@@ -1048,21 +1041,17 @@ class QRFull(Op):
return
self
.
mode
return
self
.
mode
def
perform
(
self
,
node
,
(
x
,),
(
q
,
r
)):
def
perform
(
self
,
node
,
(
x
,),
(
q
,
r
)):
try
:
assert
x
.
ndim
==
2
,
"The input of qr function should be a matrix."
assert
x
.
ndim
==
2
,
"The input of qr function should be a matrix."
q
[
0
],
r
[
0
]
=
self
.
_numop
(
x
,
q
[
0
],
r
[
0
]
=
self
.
_numop
(
x
,
self
.
mode
)
self
.
mode
)
q
[
0
]
=
q
[
0
]
.
astype
(
x
.
dtype
)
q
[
0
]
=
q
[
0
]
.
astype
(
x
.
dtype
)
r
[
0
]
=
r
[
0
]
.
astype
(
x
.
dtype
)
r
[
0
]
=
r
[
0
]
.
astype
(
x
.
dtype
)
except
numpy
.
linalg
.
LinAlgError
:
logger
.
debug
(
'Failed to find
%
s of
%
s'
%
(
self
.
_numop
.
__name__
,
node
.
inputs
[
0
]))
raise
def
__str__
(
self
):
def
__str__
(
self
):
return
self
.
_numop
.
__name__
.
capitalize
()
return
self
.
_numop
.
__name__
.
capitalize
()
class
QRIncomplete
(
Op
):
class
QRIncomplete
(
Op
):
"""
"""
Incomplete QR Decomposition.
Incomplete QR Decomposition.
...
@@ -1091,17 +1080,11 @@ class QRIncomplete(Op):
...
@@ -1091,17 +1080,11 @@ class QRIncomplete(Op):
return
Apply
(
self
,
[
x
],
[
q
])
return
Apply
(
self
,
[
x
],
[
q
])
def
perform
(
self
,
node
,
(
x
,),
(
q
,)):
def
perform
(
self
,
node
,
(
x
,),
(
q
,)):
try
:
assert
x
.
ndim
==
2
,
"The input of qr function should be a matrix."
assert
x
.
ndim
==
2
,
"The input of qr function should be a matrix."
q
[
0
]
=
self
.
_numop
(
x
,
q
[
0
]
=
self
.
_numop
(
x
,
self
.
mode
)
self
.
mode
)
q
[
0
]
=
q
[
0
]
.
astype
(
x
.
dtype
)
except
numpy
.
linalg
.
LinAlgError
:
q
[
0
]
=
q
[
0
]
.
astype
(
x
.
dtype
)
logger
.
debug
(
'Failed to find
%
s of
%
s'
%
(
self
.
_numop
.
__name__
,
node
.
inputs
[
0
]))
raise
def
__str__
(
self
):
def
__str__
(
self
):
return
self
.
_numop
.
__name__
.
capitalize
()
return
self
.
_numop
.
__name__
.
capitalize
()
...
@@ -1139,19 +1122,14 @@ def qr(a, mode="full"):
...
@@ -1139,19 +1122,14 @@ def qr(a, mode="full"):
Returns :
Returns :
---------
---------
q :
ndarray
of float or complex, optional
q :
matrix
of float or complex, optional
A matrix with orthonormal columns. When mode = 'complete'
A matrix with orthonormal columns. When mode = 'complete'
the result is an orthogonal/unitary matrix depending on whether
the result is an orthogonal/unitary matrix depending on whether
or not a is real/complex. The determinant may be either +/- 1 in that case.
or not a is real/complex. The determinant may be either +/- 1 in that case.
r :
ndarray
of float or complex, optional
r :
matrix
of float or complex, optional
The upper-triangular matrix.
The upper-triangular matrix.
(h, tau) : ndarrays of np.double or np.cdouble, optional
The array h contains the Householder reflectors that
generate q along with r. The tau array contains scaling
factors for the reflectors. In the deprecated
'economic' mode only h is returned.
"""
"""
if
mode
==
"full"
:
if
mode
==
"full"
:
return
QRFull
()(
a
)
return
QRFull
()(
a
)
...
...
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