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testgroup
pytensor
Commits
eeaa94d6
提交
eeaa94d6
authored
12月 31, 2020
作者:
Brandon T. Willard
提交者:
Brandon T. Willard
12月 31, 2020
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Allow RandomVariable float dtypes to be set dynamically
上级
3707d812
隐藏空白字符变更
内嵌
并排
正在显示
3 个修改的文件
包含
56 行增加
和
30 行删除
+56
-30
test_op.py
tests/tensor/random/test_op.py
+21
-2
basic.py
theano/tensor/random/basic.py
+18
-16
op.py
theano/tensor/random/op.py
+17
-12
没有找到文件。
tests/tensor/random/test_op.py
浏览文件 @
eeaa94d6
...
@@ -35,14 +35,14 @@ def test_default_shape_from_params():
...
@@ -35,14 +35,14 @@ def test_default_shape_from_params():
assert
res
==
(
3
,
4
)
assert
res
==
(
3
,
4
)
def
test_RandomVariable
():
def
test_RandomVariable
_basics
():
str_res
=
str
(
str_res
=
str
(
RandomVariable
(
RandomVariable
(
"normal"
,
"normal"
,
0
,
0
,
[
0
,
0
],
[
0
,
0
],
"normal"
,
config
.
floatX
,
inplace
=
True
,
inplace
=
True
,
)
)
)
)
...
@@ -130,6 +130,25 @@ def test_RandomVariable():
...
@@ -130,6 +130,25 @@ def test_RandomVariable():
assert
res
==
[
False
]
*
3
assert
res
==
[
False
]
*
3
def
test_RandomVariable_floatX
():
test_rv_op
=
RandomVariable
(
"normal"
,
0
,
[
0
,
0
],
"floatX"
,
inplace
=
True
,
)
assert
test_rv_op
.
dtype
==
"floatX"
assert
test_rv_op
(
0
,
1
)
.
dtype
==
config
.
floatX
new_floatX
=
"float64"
if
config
.
floatX
==
"float32"
else
"float32"
with
change_flags
(
floatX
=
new_floatX
):
assert
test_rv_op
(
0
,
1
)
.
dtype
==
new_floatX
def
test_observed
():
def
test_observed
():
rv_var
=
normal
(
0
,
1
,
size
=
3
)
rv_var
=
normal
(
0
,
1
,
size
=
3
)
obs_var
=
observed
(
rv_var
,
np
.
array
([
0.2
,
0.1
,
-
2.4
],
dtype
=
config
.
floatX
))
obs_var
=
observed
(
rv_var
,
np
.
array
([
0.2
,
0.1
,
-
2.4
],
dtype
=
config
.
floatX
))
...
...
theano/tensor/random/basic.py
浏览文件 @
eeaa94d6
...
@@ -2,7 +2,6 @@ import numpy as np
...
@@ -2,7 +2,6 @@ import numpy as np
import
scipy.stats
as
stats
import
scipy.stats
as
stats
import
theano
import
theano
from
theano.configdefaults
import
config
from
theano.tensor.basic
import
as_tensor_variable
from
theano.tensor.basic
import
as_tensor_variable
from
theano.tensor.random.op
import
RandomVariable
,
default_shape_from_params
from
theano.tensor.random.op
import
RandomVariable
,
default_shape_from_params
from
theano.tensor.random.utils
import
broadcast_params
from
theano.tensor.random.utils
import
broadcast_params
...
@@ -20,7 +19,7 @@ class UniformRV(RandomVariable):
...
@@ -20,7 +19,7 @@ class UniformRV(RandomVariable):
name
=
"uniform"
name
=
"uniform"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"U"
,
"
\\
operatorname{U}"
)
_print_name
=
(
"U"
,
"
\\
operatorname{U}"
)
def
__call__
(
self
,
low
=
0.0
,
high
=
1.0
,
size
=
None
,
**
kwargs
):
def
__call__
(
self
,
low
=
0.0
,
high
=
1.0
,
size
=
None
,
**
kwargs
):
...
@@ -34,7 +33,7 @@ class BetaRV(RandomVariable):
...
@@ -34,7 +33,7 @@ class BetaRV(RandomVariable):
name
=
"beta"
name
=
"beta"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"Beta"
,
"
\\
operatorname{Beta}"
)
_print_name
=
(
"Beta"
,
"
\\
operatorname{Beta}"
)
...
@@ -45,7 +44,7 @@ class NormalRV(RandomVariable):
...
@@ -45,7 +44,7 @@ class NormalRV(RandomVariable):
name
=
"normal"
name
=
"normal"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"N"
,
"
\\
operatorname{N}"
)
_print_name
=
(
"N"
,
"
\\
operatorname{N}"
)
def
__call__
(
self
,
loc
=
0.0
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
def
__call__
(
self
,
loc
=
0.0
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
...
@@ -59,7 +58,7 @@ class HalfNormalRV(RandomVariable):
...
@@ -59,7 +58,7 @@ class HalfNormalRV(RandomVariable):
name
=
"halfnormal"
name
=
"halfnormal"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"N**+"
,
"
\\
operatorname{N^{+}}"
)
_print_name
=
(
"N**+"
,
"
\\
operatorname{N^{+}}"
)
def
__call__
(
self
,
loc
=
0.0
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
def
__call__
(
self
,
loc
=
0.0
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
...
@@ -77,7 +76,7 @@ class GammaRV(RandomVariable):
...
@@ -77,7 +76,7 @@ class GammaRV(RandomVariable):
name
=
"halfnormal"
name
=
"halfnormal"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"Gamma"
,
"
\\
operatorname{Gamma}"
)
_print_name
=
(
"Gamma"
,
"
\\
operatorname{Gamma}"
)
def
__call__
(
self
,
shape
,
rate
,
size
=
None
,
**
kwargs
):
def
__call__
(
self
,
shape
,
rate
,
size
=
None
,
**
kwargs
):
...
@@ -95,7 +94,7 @@ class ExponentialRV(RandomVariable):
...
@@ -95,7 +94,7 @@ class ExponentialRV(RandomVariable):
name
=
"exponential"
name
=
"exponential"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
]
ndims_params
=
[
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"Exp"
,
"
\\
operatorname{Exp}"
)
_print_name
=
(
"Exp"
,
"
\\
operatorname{Exp}"
)
def
__call__
(
self
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
def
__call__
(
self
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
...
@@ -130,14 +129,17 @@ class MvNormalRV(RandomVariable):
...
@@ -130,14 +129,17 @@ class MvNormalRV(RandomVariable):
name
=
"multivariate_normal"
name
=
"multivariate_normal"
ndim_supp
=
1
ndim_supp
=
1
ndims_params
=
[
1
,
2
]
ndims_params
=
[
1
,
2
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"N"
,
"
\\
operatorname{N}"
)
_print_name
=
(
"N"
,
"
\\
operatorname{N}"
)
def
__call__
(
self
,
mean
=
None
,
cov
=
None
,
size
=
None
,
**
kwargs
):
def
__call__
(
self
,
mean
=
None
,
cov
=
None
,
size
=
None
,
**
kwargs
):
dtype
=
theano
.
config
.
floatX
if
self
.
dtype
==
"floatX"
else
self
.
dtype
if
mean
is
None
:
if
mean
is
None
:
mean
=
np
.
array
([
0.0
],
dtype
=
self
.
dtype
)
mean
=
np
.
array
([
0.0
],
dtype
=
dtype
)
if
cov
is
None
:
if
cov
is
None
:
cov
=
np
.
array
([[
1.0
]],
dtype
=
self
.
dtype
)
cov
=
np
.
array
([[
1.0
]],
dtype
=
dtype
)
return
super
()
.
__call__
(
mean
,
cov
,
size
=
size
,
**
kwargs
)
return
super
()
.
__call__
(
mean
,
cov
,
size
=
size
,
**
kwargs
)
@classmethod
@classmethod
...
@@ -171,7 +173,7 @@ class DirichletRV(RandomVariable):
...
@@ -171,7 +173,7 @@ class DirichletRV(RandomVariable):
name
=
"dirichlet"
name
=
"dirichlet"
ndim_supp
=
1
ndim_supp
=
1
ndims_params
=
[
1
]
ndims_params
=
[
1
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"Dir"
,
"
\\
operatorname{Dir}"
)
_print_name
=
(
"Dir"
,
"
\\
operatorname{Dir}"
)
@classmethod
@classmethod
...
@@ -209,7 +211,7 @@ class CauchyRV(RandomVariable):
...
@@ -209,7 +211,7 @@ class CauchyRV(RandomVariable):
name
=
"cauchy"
name
=
"cauchy"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"C"
,
"
\\
operatorname{C}"
)
_print_name
=
(
"C"
,
"
\\
operatorname{C}"
)
def
__call__
(
self
,
loc
=
0.0
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
def
__call__
(
self
,
loc
=
0.0
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
...
@@ -227,7 +229,7 @@ class HalfCauchyRV(RandomVariable):
...
@@ -227,7 +229,7 @@ class HalfCauchyRV(RandomVariable):
name
=
"cauchy"
name
=
"cauchy"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"C**+"
,
"
\\
operatorname{C^{+}}"
)
_print_name
=
(
"C**+"
,
"
\\
operatorname{C^{+}}"
)
def
__call__
(
self
,
loc
=
0.0
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
def
__call__
(
self
,
loc
=
0.0
,
scale
=
1.0
,
size
=
None
,
**
kwargs
):
...
@@ -245,7 +247,7 @@ class InvGammaRV(RandomVariable):
...
@@ -245,7 +247,7 @@ class InvGammaRV(RandomVariable):
name
=
"invgamma"
name
=
"invgamma"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"InvGamma"
,
"
\\
operatorname{Gamma^{-1}}"
)
_print_name
=
(
"InvGamma"
,
"
\\
operatorname{Gamma^{-1}}"
)
@classmethod
@classmethod
...
@@ -260,7 +262,7 @@ class TruncExponentialRV(RandomVariable):
...
@@ -260,7 +262,7 @@ class TruncExponentialRV(RandomVariable):
name
=
"truncexpon"
name
=
"truncexpon"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
,
0
]
ndims_params
=
[
0
,
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"TruncExp"
,
"
\\
operatorname{TruncExp}"
)
_print_name
=
(
"TruncExp"
,
"
\\
operatorname{TruncExp}"
)
@classmethod
@classmethod
...
@@ -392,7 +394,7 @@ class PolyaGammaRV(RandomVariable):
...
@@ -392,7 +394,7 @@ class PolyaGammaRV(RandomVariable):
name
=
"polya-gamma"
name
=
"polya-gamma"
ndim_supp
=
0
ndim_supp
=
0
ndims_params
=
[
0
,
0
]
ndims_params
=
[
0
,
0
]
dtype
=
config
.
floatX
dtype
=
"floatX"
_print_name
=
(
"PG"
,
"
\\
operatorname{PG}"
)
_print_name
=
(
"PG"
,
"
\\
operatorname{PG}"
)
@classmethod
@classmethod
...
...
theano/tensor/random/op.py
浏览文件 @
eeaa94d6
...
@@ -110,16 +110,17 @@ class RandomVariable(Op):
...
@@ -110,16 +110,17 @@ class RandomVariable(Op):
The `Op`'s display name.
The `Op`'s display name.
ndim_supp: int
ndim_supp: int
Total number of dimensions for a single draw of the random variable
Total number of dimensions for a single draw of the random variable
(e.g. a multivariate normal draw is 1D, so `
ndim_supp = 1
`).
(e.g. a multivariate normal draw is 1D, so `
`ndim_supp = 1`
`).
ndims_params: list of int
ndims_params: list of int
Number of dimensions for each distribution parameter when the
Number of dimensions for each distribution parameter when the
parameters only specify a single drawn of the random variable (e.g. a
parameters only specify a single drawn of the random variable
multivariate normal's mean is 1D and covariance is 2D, so `ndims_params
(e.g. a multivariate normal's mean is 1D and covariance is 2D, so
= [1, 2]`).
``ndims_params = [1, 2]``).
dtype: Theano dtype (optional)
dtype: str (optional)
The dtype of the sampled output(s). If `None` (the default), the
The dtype of the sampled output. If the value ``"floatX"`` is
`dtype` keyword must be set when `RandomVariable.make_node` is
given, then ``dtype`` is set to ``theano.config.floatX``. If
called.
``None`` (the default), the `dtype` keyword must be set when
`RandomVariable.make_node` is called.
inplace: boolean (optional)
inplace: boolean (optional)
Determine whether or not the underlying rng state is updated
Determine whether or not the underlying rng state is updated
in-place or not (i.e. copied).
in-place or not (i.e. copied).
...
@@ -135,6 +136,7 @@ class RandomVariable(Op):
...
@@ -135,6 +136,7 @@ class RandomVariable(Op):
ndims_params
if
ndims_params
is
not
None
else
getattr
(
self
,
"ndims_params"
)
ndims_params
if
ndims_params
is
not
None
else
getattr
(
self
,
"ndims_params"
)
)
)
self
.
dtype
=
dtype
or
getattr
(
self
,
"dtype"
,
None
)
self
.
dtype
=
dtype
or
getattr
(
self
,
"dtype"
,
None
)
self
.
inplace
=
(
self
.
inplace
=
(
inplace
if
inplace
is
not
None
else
getattr
(
self
,
"inplace"
,
False
)
inplace
if
inplace
is
not
None
else
getattr
(
self
,
"inplace"
,
False
)
)
)
...
@@ -333,9 +335,10 @@ class RandomVariable(Op):
...
@@ -333,9 +335,10 @@ class RandomVariable(Op):
new one, if `None`.
new one, if `None`.
size: int or Sequence
size: int or Sequence
Numpy-like size of the output (i.e. replications).
Numpy-like size of the output (i.e. replications).
dtype: Theano dtype
dtype: str
The dtype of the sampled output. This value is only used when
The dtype of the sampled output. If the value ``"floatX"`` is
`self.dtype` isn't set.
given, then ``dtype`` is set to ``theano.config.floatX``. This
value is only used when `self.dtype` isn't set.
dist_params: list
dist_params: list
Distribution parameters.
Distribution parameters.
...
@@ -372,7 +375,9 @@ class RandomVariable(Op):
...
@@ -372,7 +375,9 @@ class RandomVariable(Op):
bcast
=
self
.
compute_bcast
(
dist_params
,
size
)
bcast
=
self
.
compute_bcast
(
dist_params
,
size
)
dtype
=
self
.
dtype
or
dtype
dtype
=
self
.
dtype
or
dtype
if
dtype
is
None
or
(
isinstance
(
dtype
,
str
)
and
dtype
not
in
all_dtypes
):
if
dtype
==
"floatX"
:
dtype
=
config
.
floatX
elif
dtype
is
None
or
(
isinstance
(
dtype
,
str
)
and
dtype
not
in
all_dtypes
):
# dtype = tt.scal.upcast(self.dtype, *[p.dtype for p in dist_params])
# dtype = tt.scal.upcast(self.dtype, *[p.dtype for p in dist_params])
raise
TypeError
(
"dtype is unspecified"
)
raise
TypeError
(
"dtype is unspecified"
)
...
...
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