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testgroup
pytensor
Commits
daacd069
提交
daacd069
authored
10月 19, 2020
作者:
Brandon T. Willard
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Replace theano.tensor alias T with tt in tests.scan_module
上级
b4dc02d6
隐藏空白字符变更
内嵌
并排
正在显示
2 个修改的文件
包含
54 行增加
和
52 行删除
+54
-52
test_scan_checkpoints.py
tests/scan_module/test_scan_checkpoints.py
+7
-7
test_scan_opt.py
tests/scan_module/test_scan_opt.py
+47
-45
没有找到文件。
tests/scan_module/test_scan_checkpoints.py
浏览文件 @
daacd069
...
...
@@ -2,7 +2,7 @@ import numpy as np
import
pytest
import
theano
import
theano.tensor
as
T
import
theano.tensor
as
tt
import
theano.gpuarray
try
:
...
...
@@ -15,25 +15,25 @@ except ImportError:
class
TestScanCheckpoint
:
def
setup_method
(
self
):
self
.
k
=
T
.
iscalar
(
"k"
)
self
.
A
=
T
.
vector
(
"A"
)
self
.
k
=
tt
.
iscalar
(
"k"
)
self
.
A
=
tt
.
vector
(
"A"
)
result
,
_
=
theano
.
scan
(
fn
=
lambda
prior_result
,
A
:
prior_result
*
A
,
outputs_info
=
T
.
ones_like
(
self
.
A
),
outputs_info
=
tt
.
ones_like
(
self
.
A
),
non_sequences
=
self
.
A
,
n_steps
=
self
.
k
,
)
result_check
,
_
=
theano
.
scan_checkpoints
(
fn
=
lambda
prior_result
,
A
:
prior_result
*
A
,
outputs_info
=
T
.
ones_like
(
self
.
A
),
outputs_info
=
tt
.
ones_like
(
self
.
A
),
non_sequences
=
self
.
A
,
n_steps
=
self
.
k
,
save_every_N
=
100
,
)
self
.
result
=
result
[
-
1
]
self
.
result_check
=
result_check
[
-
1
]
self
.
grad_A
=
T
.
grad
(
self
.
result
.
sum
(),
self
.
A
)
self
.
grad_A_check
=
T
.
grad
(
self
.
result_check
.
sum
(),
self
.
A
)
self
.
grad_A
=
tt
.
grad
(
self
.
result
.
sum
(),
self
.
A
)
self
.
grad_A_check
=
tt
.
grad
(
self
.
result_check
.
sum
(),
self
.
A
)
def
test_forward_pass
(
self
):
# Test forward computation of A**k.
...
...
tests/scan_module/test_scan_opt.py
浏览文件 @
daacd069
import
numpy
as
np
import
theano
import
theano.tensor
as
tt
from
theano
import
config
from
theano
import
tensor
as
T
from
theano.scan_module.scan_op
import
Scan
from
tests
import
unittest_tools
as
utt
...
...
@@ -40,11 +40,11 @@ class TestGaussNewton:
# create symbolic inputs and targets variables
if
batch_size
==
1
:
x
=
T
.
matrix
(
"inputs"
)
t
=
T
.
matrix
(
"targets"
)
x
=
tt
.
matrix
(
"inputs"
)
t
=
tt
.
matrix
(
"targets"
)
else
:
x
=
T
.
tensor3
(
"inputs"
)
t
=
T
.
tensor3
(
"inputs"
)
x
=
tt
.
tensor3
(
"inputs"
)
t
=
tt
.
tensor3
(
"inputs"
)
x
.
tag
.
test_value
=
inputs
.
get_value
(
borrow
=
True
)
t
.
tag
.
test_value
=
targets
.
get_value
(
borrow
=
True
)
...
...
@@ -66,17 +66,17 @@ class TestGaussNewton:
# recurrent function
def
step
(
x_t
,
h_tm1
):
h
=
T
.
tanh
(
T
.
dot
(
h_tm1
,
W_hh
)
+
T
.
dot
(
x_t
,
W_xh
)
+
b_h
)
h
=
tt
.
tanh
(
tt
.
dot
(
h_tm1
,
W_hh
)
+
tt
.
dot
(
x_t
,
W_xh
)
+
b_h
)
return
h
# build recurrent graph
if
batch_size
==
1
:
h_0
=
T
.
alloc
(
0.0
,
10
)
.
astype
(
config
.
floatX
)
h_0
=
tt
.
alloc
(
0.0
,
10
)
.
astype
(
config
.
floatX
)
else
:
h_0
=
T
.
alloc
(
0.0
,
batch_size
,
10
)
.
astype
(
config
.
floatX
)
h_0
=
tt
.
alloc
(
0.0
,
batch_size
,
10
)
.
astype
(
config
.
floatX
)
h
,
updates
=
theano
.
scan
(
step
,
sequences
=
[
x
],
outputs_info
=
[
h_0
])
# network output
y
=
T
.
dot
(
h
,
W_hy
)
+
b_y
y
=
tt
.
dot
(
h
,
W_hy
)
+
b_y
# Create Gauss-Newton-Matrix object. Not really of any use here, but I
# need it for Hessian-Free optimization.
...
...
@@ -95,7 +95,7 @@ class TestGaussNewton:
# Compute Gauss-Newton-Matrix times some vector `v` which is `p` in CG,
# but for simplicity, I just take the parameters vector because it's
# already there.
Gv
=
gn
(
v
=
params
,
cost
=
cost
,
parameters
=
params
,
damp
=
T
.
constant
(
1.0
))
Gv
=
gn
(
v
=
params
,
cost
=
cost
,
parameters
=
params
,
damp
=
tt
.
constant
(
1.0
))
# compile Theano function
f
=
theano
.
function
([],
[
cost_
]
+
Gv
,
givens
=
{
x
:
inputs
,
t
:
targets
},
mode
=
mode
)
...
...
@@ -121,9 +121,11 @@ class GaussNewtonMatrix(object):
def
__call__
(
self
,
v
,
cost
,
parameters
,
damp
):
# compute Gauss-Newton Matrix right-multiplied by `v`
Jv
=
T
.
Rop
(
self
.
_s
,
parameters
,
v
)
HJv
=
T
.
grad
(
T
.
sum
(
T
.
grad
(
cost
,
self
.
_s
)
*
Jv
),
self
.
_s
,
consider_constant
=
[
Jv
])
JHJv
=
T
.
grad
(
T
.
sum
(
HJv
*
self
.
_s
),
parameters
,
consider_constant
=
[
HJv
,
Jv
])
Jv
=
tt
.
Rop
(
self
.
_s
,
parameters
,
v
)
HJv
=
tt
.
grad
(
tt
.
sum
(
tt
.
grad
(
cost
,
self
.
_s
)
*
Jv
),
self
.
_s
,
consider_constant
=
[
Jv
]
)
JHJv
=
tt
.
grad
(
tt
.
sum
(
HJv
*
self
.
_s
),
parameters
,
consider_constant
=
[
HJv
,
Jv
])
# apply Tikhonov damping
JHJv
=
[
JHJvi
+
damp
*
vi
for
JHJvi
,
vi
in
zip
(
JHJv
,
v
)]
...
...
@@ -142,17 +144,17 @@ class TestPushOutScanOutputDot(object):
# Test the case where the vector input to the dot is not already an
# output of the inner function.
v
=
T
.
vector
()
m
=
T
.
matrix
()
output
=
T
.
dot
(
v
,
m
)
v
=
tt
.
vector
()
m
=
tt
.
matrix
()
output
=
tt
.
dot
(
v
,
m
)
# Compile the function twice, once with the optimization and once
# without
opt_mode
=
mode
.
including
(
"scan"
)
f_opt
=
theano
.
function
([
v
,
m
],
T
.
jacobian
(
output
,
v
),
mode
=
opt_mode
)
f_opt
=
theano
.
function
([
v
,
m
],
tt
.
jacobian
(
output
,
v
),
mode
=
opt_mode
)
no_opt_mode
=
mode
.
excluding
(
"scanOp_pushout_output"
)
f_no_opt
=
theano
.
function
([
v
,
m
],
T
.
jacobian
(
output
,
v
),
mode
=
no_opt_mode
)
f_no_opt
=
theano
.
function
([
v
,
m
],
tt
.
jacobian
(
output
,
v
),
mode
=
no_opt_mode
)
# Ensure that the optimization was performed correctly in f_opt
# The inner function of scan should have only one output and it should
...
...
@@ -161,7 +163,7 @@ class TestPushOutScanOutputDot(object):
node
for
node
in
f_opt
.
maker
.
fgraph
.
toposort
()
if
isinstance
(
node
.
op
,
Scan
)
][
0
]
assert
len
(
scan_node
.
op
.
outputs
)
==
1
assert
not
isinstance
(
scan_node
.
op
.
outputs
[
0
],
T
.
Dot
)
assert
not
isinstance
(
scan_node
.
op
.
outputs
[
0
],
tt
.
Dot
)
# Ensure that the function compiled with the optimization produces
# the same results as the function compiled without
...
...
@@ -177,12 +179,12 @@ class TestPushOutScanOutputDot(object):
# Test the case where the vector input to the dot is already a nitsot
# output of the inner function.
a
=
T
.
matrix
()
b
=
T
.
matrix
()
a
=
tt
.
matrix
()
b
=
tt
.
matrix
()
def
inner_fct
(
vect
,
mat
):
vect_squared
=
vect
**
2
return
T
.
dot
(
vect_squared
,
mat
),
vect_squared
return
tt
.
dot
(
vect_squared
,
mat
),
vect_squared
outputs
,
updates
=
theano
.
scan
(
fn
=
inner_fct
,
outputs_info
=
[
None
]
*
2
,
sequences
=
a
,
non_sequences
=
b
...
...
@@ -205,7 +207,7 @@ class TestPushOutScanOutputDot(object):
# NOTE: WHEN INFER_SHAPE IS REENABLED, BELOW THE SCAN MUST
# HAVE ONLY 1 OUTPUT.
assert
len
(
scan_node
.
op
.
outputs
)
==
2
assert
not
isinstance
(
scan_node
.
op
.
outputs
[
0
],
T
.
Dot
)
assert
not
isinstance
(
scan_node
.
op
.
outputs
[
0
],
tt
.
Dot
)
# Ensure that the function compiled with the optimization produces
# the same results as the function compiled without
...
...
@@ -222,12 +224,12 @@ class TestPushOutScanOutputDot(object):
# Test the case where the vector input to the dot is not already a
# non-nitsot (in this case a sitsot) output of the inner function.
a
=
T
.
matrix
()
b
=
T
.
matrix
()
a
=
tt
.
matrix
()
b
=
tt
.
matrix
()
def
inner_fct
(
seq1
,
previous_output1
,
nonseq1
):
output1
=
previous_output1
+
seq1
output2
=
T
.
dot
(
output1
,
nonseq1
)
output2
=
tt
.
dot
(
output1
,
nonseq1
)
return
output1
,
output2
outputs
,
updates
=
theano
.
scan
(
...
...
@@ -249,7 +251,7 @@ class TestPushOutScanOutputDot(object):
node
for
node
in
f_opt
.
maker
.
fgraph
.
toposort
()
if
isinstance
(
node
.
op
,
Scan
)
][
0
]
assert
len
(
scan_node
.
op
.
outputs
)
==
2
assert
not
isinstance
(
scan_node
.
op
.
outputs
[
0
],
T
.
Dot
)
assert
not
isinstance
(
scan_node
.
op
.
outputs
[
0
],
tt
.
Dot
)
# Ensure that the function compiled with the optimization produces
# the same results as the function compiled without
...
...
@@ -293,18 +295,18 @@ class TestPushOutSumOfDot:
W
.
name
=
"W"
# Variables and their values
x
=
T
.
tensor3
(
"x"
)
x
=
tt
.
tensor3
(
"x"
)
x_value
=
np
.
random
.
normal
(
size
=
(
seq_len
,
batch_size
,
dim
),
scale
=
0.0001
)
.
astype
(
config
.
floatX
)
ri
=
T
.
tensor3
(
"ri"
)
ri
=
tt
.
tensor3
(
"ri"
)
ri_value
=
x_value
zi
=
T
.
tensor3
(
"zi"
)
zi
=
tt
.
tensor3
(
"zi"
)
zi_value
=
x_value
init
=
T
.
alloc
(
np
.
cast
[
config
.
floatX
](
0
),
batch_size
,
dim
)
init
=
tt
.
alloc
(
np
.
cast
[
config
.
floatX
](
0
),
batch_size
,
dim
)
def
rnn_step1
(
# sequences
...
...
@@ -316,12 +318,12 @@ class TestPushOutSumOfDot:
):
pre_r
=
ri
+
h
.
dot
(
U
)
pre_z
=
zi
+
h
.
dot
(
V
)
r
=
T
.
nnet
.
sigmoid
(
pre_r
)
z
=
T
.
nnet
.
sigmoid
(
pre_z
)
r
=
tt
.
nnet
.
sigmoid
(
pre_r
)
z
=
tt
.
nnet
.
sigmoid
(
pre_z
)
after_r
=
r
*
h
pre_h
=
x
+
after_r
.
dot
(
W
)
new_h
=
T
.
tanh
(
pre_h
)
new_h
=
tt
.
tanh
(
pre_h
)
res_h
=
z
*
new_h
+
(
1
-
z
)
*
h
return
res_h
...
...
@@ -338,7 +340,7 @@ class TestPushOutSumOfDot:
mode
=
opt_mode
,
)
cost
=
h
[
-
1
]
.
sum
()
grad1
=
T
.
grad
(
cost
,
[
U
,
V
,
W
])
grad1
=
tt
.
grad
(
cost
,
[
U
,
V
,
W
])
f_opt
=
theano
.
function
(
inputs
=
[
x
,
ri
,
zi
],
outputs
=
grad1
,
mode
=
opt_mode
)
no_opt_mode
=
mode
.
excluding
(
"scanOp_pushout_output"
)
...
...
@@ -351,7 +353,7 @@ class TestPushOutSumOfDot:
mode
=
no_opt_mode
,
)
cost
=
h
[
-
1
]
.
sum
()
grad1
=
T
.
grad
(
cost
,
[
U
,
V
,
W
])
grad1
=
tt
.
grad
(
cost
,
[
U
,
V
,
W
])
f_no_opt
=
theano
.
function
(
inputs
=
[
x
,
ri
,
zi
],
outputs
=
grad1
,
mode
=
no_opt_mode
)
# Validate that the optimization has been applied
...
...
@@ -361,8 +363,8 @@ class TestPushOutSumOfDot:
for
output
in
scan_node_grad
.
op
.
outputs
:
assert
not
(
isinstance
(
output
.
owner
.
op
,
T
.
elemwise
.
Elemwise
)
and
any
([
isinstance
(
i
,
T
.
Dot
)
for
i
in
output
.
owner
.
inputs
])
isinstance
(
output
.
owner
.
op
,
tt
.
elemwise
.
Elemwise
)
and
any
([
isinstance
(
i
,
tt
.
Dot
)
for
i
in
output
.
owner
.
inputs
])
)
# Compare the outputs of the two functions on the same input data.
...
...
@@ -373,20 +375,20 @@ class TestPushOutSumOfDot:
def
test_non_zero_init
(
self
):
# Test the case where the initial value for the nitsot output is non-zero
input1
=
T
.
tensor3
()
input2
=
T
.
tensor3
()
input3
=
T
.
tensor3
()
input1
=
tt
.
tensor3
()
input2
=
tt
.
tensor3
()
input3
=
tt
.
tensor3
()
W
=
theano
.
shared
(
np
.
random
.
normal
(
size
=
(
4
,
5
)))
.
astype
(
config
.
floatX
)
U
=
theano
.
shared
(
np
.
random
.
normal
(
size
=
(
6
,
7
)))
.
astype
(
config
.
floatX
)
def
inner_fct
(
seq1
,
seq2
,
seq3
,
previous_output
):
temp1
=
T
.
dot
(
seq1
,
W
)
+
seq3
temp2
=
T
.
dot
(
seq2
,
U
)
dot_output
=
T
.
dot
(
temp1
,
temp2
)
temp1
=
tt
.
dot
(
seq1
,
W
)
+
seq3
temp2
=
tt
.
dot
(
seq2
,
U
)
dot_output
=
tt
.
dot
(
temp1
,
temp2
)
return
previous_output
+
dot_output
init
=
T
.
as_tensor_variable
(
np
.
random
.
normal
(
size
=
(
3
,
7
)))
init
=
tt
.
as_tensor_variable
(
np
.
random
.
normal
(
size
=
(
3
,
7
)))
# Compile the function twice, once with the optimization and once
# without
...
...
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