merged

core.py

@@ -71,6 +71,8 @@ def _compile_dir():
     else:
         # use (and possibly create) a default code cache location
         platform_id = platform.platform() + '-' + platform.processor()
+        import re
+        platform_id = re.sub("[\(\)\s]+", "_", platform_id)
         cachedir = os.path.join(os.getenv('HOME'), '.omega', 'compiledir_'+platform_id)
         if not os.access(cachedir, os.R_OK | os.W_OK):
             #this may raise a number of problems, I think all of which are serious.
@@ -530,6 +532,12 @@ class omega_op(Numpy2Op):
             instantiate.customize.add_header(header)
         for lib in self.c_libs():
             instantiate.customize.add_library(lib)
+        #add_library_dir
+        
+        #print dir(instantiate.customize)
+        #print instantiate.customize._library_dirs
+        if os.getenv('OMEGA_BLAS_LD_LIBRARY_PATH'):
+            instantiate.customize.add_library_dir(os.getenv('OMEGA_BLAS_LD_LIBRARY_PATH'))
 
         mod.add_function(instantiate)
         mod.compile(location = _compile_dir())

epydoc-fast

+# TODO:
+#   Get all graphs to work!
+
+
+[epydoc] # Epydoc section marker (required by ConfigParser)
+
+# The list of objects to document.  Objects can be named using
+# dotted names, module filenames, or package directory names.
+# Alases for this option include "objects" and "values".
+modules: *.py, gof/*.py
+
+# The type of output that should be generated.  Should be one
+# of: html, text, latex, dvi, ps, pdf.
+output: html
+
+# The path to the output directory.  May be relative or absolute.
+target: html/
+
+# An integer indicating how verbose epydoc should be.  The default
+# value is 0; negative values will supress warnings and errors;
+# positive values will give more verbose output.
+verbosity: 1
+
+# A boolean value indicating that Epydoc should show a tracaback
+# in case of unexpected error. By default don't show tracebacks
+debug: 0
+
+# If True, don't try to use colors or cursor control when doing
+# textual output. The default False assumes a rich text prompt
+simple-term: 0
+
+
+### Generation options
+
+# The default markup language for docstrings, for modules that do
+# not define __docformat__.  Defaults to epytext.
+docformat: epytext
+
+# Whether or not parsing should be used to examine objects.
+parse: yes
+
+# Whether or not introspection should be used to examine objects.
+introspect: yes
+
+# Don't examine in any way the modules whose dotted name match this
+# regular expression pattern.
+#exclude
+
+# Don't perform introspection on the modules whose dotted name match this
+# regular expression pattern.
+#exclude-introspect
+
+# Don't perform parsing on the modules whose dotted name match this
+# regular expression pattern.
+#exclude-parse
+
+# The format for showing inheritance objects.
+# It should be one of: 'grouped', 'listed', 'included'.
+inheritance: grouped
+
+# Whether or not to inclue private variables.  (Even if included,
+# private variables will be hidden by default.)
+private: yes
+
+# Whether or not to list each module's imports.
+imports: yes
+
+# Whether or not to include syntax highlighted source code in
+# the output (HTML only).
+sourcecode: yes
+
+# Whether or not to includea a page with Epydoc log, containing
+# effective option at the time of generation and the reported logs.
+include-log: yes
+
+
+### Output options
+
+# The documented project's name.
+name: Theano
+
+# The CSS stylesheet for HTML output.  Can be the name of a builtin
+# stylesheet, or the name of a file.
+css: white
+
+# The documented project's URL.
+url: http://lgcm:8000/testenv/
+
+# HTML code for the project link in the navigation bar.  If left
+# unspecified, the project link will be generated based on the
+# project's name and URL.
+#link: <a href="somewhere">My Cool Project</a>
+
+# The "top" page for the documentation.  Can be a URL, the name
+# of a module or class, or one of the special names "trees.html",
+# "indices.html", or "help.html"
+#top: os.path
+
+# An alternative help file.  The named file should contain the
+# body of an HTML file; navigation bars will be added to it.
+#help: my_helpfile.html
+
+# Whether or not to include a frames-based table of contents.
+frames: yes
+
+# Whether each class should be listed in its own section when
+# generating LaTeX or PDF output.
+separate-classes: no
+
+
+### API linking options
+
+# Define a new API document.  A new interpreted text role
+# will be created
+#external-api: epydoc
+
+# Use the records in this file to resolve objects in the API named NAME.
+#external-api-file: epydoc:api-objects.txt
+
+# Use this URL prefix to configure the string returned for external API.
+#external-api-root: epydoc:http://epydoc.sourceforge.net/api
+
+
+### Graph options
+
+# The list of graph types that should be automatically included
+# in the output.  Graphs are generated using the Graphviz "dot"
+# executable.  Graph types include: "classtree", "callgraph",
+# "umlclass".  Use "all" to include all graph types
+graph: all
+
+# The path to the Graphviz "dot" executable, used to generate
+# graphs.
+dotpath: /usr/bin/dot
+
+# The name of one or more pstat files (generated by the profile
+# or hotshot module).  These are used to generate call graphs.
+#pstat: sparse.pstat
+
+# Specify the font used to generate Graphviz graphs.
+# (e.g., helvetica or times).
+graph-font: Helvetica
+
+# Specify the font size used to generate Graphviz graphs.
+graph-font-size: 10
+
+
+### Return value options
+
+# The condition upon which Epydoc should exit with a non-zero
+# exit status. Possible values are error, warning, docstring_warning
+#fail-on: error

epydoc-fast.sh

+#!/bin/sh
+
+epydoc --config epydoc-fast

gof/lib.py

@@ -8,6 +8,7 @@ import env
 import features
 import ext
 
+from python25 import all
 
 __all__ = [ 'UNDEFINED',
            'current_mode',

gof/python25.py

+import sys
+if sys.version_info[:2] < (2,5):
+    def all(iterable):
+        for element in iterable:
+            if not element:
+                return False
+        return True
+else:
+     # Only bother with this else clause and the __all__ line if you are putting
+     # this in a separate file.
+     import __builtin__
+     all = __builtin__.all
+
+__all__ = ['all']

gof/result.py

@@ -10,6 +10,8 @@ import unittest
 from err import GofError
 from utils import AbstractFunctionError
 
+from python25 import all
+
 
 __all__ = ['is_result', 'ResultBase', 'BrokenLink', 'BrokenLinkError' ]