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testgroup
pytensor
Commits
bdf1617d
提交
bdf1617d
authored
10月 21, 2011
作者:
David Warde-Farley
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Remove trailing whitespace.
上级
fc199c2f
隐藏空白字符变更
内嵌
并排
正在显示
1 个修改的文件
包含
41 行增加
和
41 行删除
+41
-41
basic.py
theano/sparse/basic.py
+41
-41
没有找到文件。
theano/sparse/basic.py
浏览文件 @
bdf1617d
...
@@ -1460,13 +1460,13 @@ class Dot(gof.op.Op):
...
@@ -1460,13 +1460,13 @@ class Dot(gof.op.Op):
"""
"""
def
__eq__
(
self
,
other
):
def
__eq__
(
self
,
other
):
return
type
(
self
)
==
type
(
other
)
return
type
(
self
)
==
type
(
other
)
def
__hash__
(
self
):
def
__hash__
(
self
):
return
hash
(
type
(
self
))
return
hash
(
type
(
self
))
def
__ne__
(
self
,
other
):
def
__ne__
(
self
,
other
):
return
not
(
self
==
other
)
return
not
(
self
==
other
)
def
infer_shape
(
self
,
node
,
shapes
):
def
infer_shape
(
self
,
node
,
shapes
):
xshp
,
yshp
=
shapes
xshp
,
yshp
=
shapes
x
,
y
=
node
.
inputs
x
,
y
=
node
.
inputs
...
@@ -1479,10 +1479,10 @@ class Dot(gof.op.Op):
...
@@ -1479,10 +1479,10 @@ class Dot(gof.op.Op):
if
x
.
ndim
==
1
and
y
.
ndim
==
1
:
if
x
.
ndim
==
1
and
y
.
ndim
==
1
:
return
[()]
return
[()]
raise
NotImplementedError
()
raise
NotImplementedError
()
def
make_node
(
self
,
x
,
y
):
def
make_node
(
self
,
x
,
y
):
dtype_out
=
scalar
.
upcast
(
x
.
type
.
dtype
,
y
.
type
.
dtype
)
dtype_out
=
scalar
.
upcast
(
x
.
type
.
dtype
,
y
.
type
.
dtype
)
if
not
_is_sparse_variable
(
x
)
and
not
_is_sparse_variable
(
y
):
if
not
_is_sparse_variable
(
x
)
and
not
_is_sparse_variable
(
y
):
raise
TypeError
(
x
)
raise
TypeError
(
x
)
...
@@ -1492,17 +1492,17 @@ class Dot(gof.op.Op):
...
@@ -1492,17 +1492,17 @@ class Dot(gof.op.Op):
def
perform
(
self
,
node
,
(
x
,
y
),
(
out
,
)):
def
perform
(
self
,
node
,
(
x
,
y
),
(
out
,
)):
x_is_sparse
=
_is_sparse
(
x
)
x_is_sparse
=
_is_sparse
(
x
)
y_is_sparse
=
_is_sparse
(
y
)
y_is_sparse
=
_is_sparse
(
y
)
if
not
x_is_sparse
and
not
y_is_sparse
:
if
not
x_is_sparse
and
not
y_is_sparse
:
raise
TypeError
(
x
)
raise
TypeError
(
x
)
rval
=
x
*
y
rval
=
x
*
y
if
x_is_sparse
and
y_is_sparse
:
if
x_is_sparse
and
y_is_sparse
:
rval
=
rval
.
todense
()
rval
=
rval
.
todense
()
out
[
0
]
=
rval
out
[
0
]
=
rval
def
grad
(
self
,
(
x
,
y
),
(
gz
,)):
def
grad
(
self
,
(
x
,
y
),
(
gz
,)):
assert
_is_sparse_variable
(
x
)
or
_is_sparse_variable
(
y
)
assert
_is_sparse_variable
(
x
)
or
_is_sparse_variable
(
y
)
...
@@ -1525,10 +1525,10 @@ def dot(x, y):
...
@@ -1525,10 +1525,10 @@ def dot(x, y):
x_is_sparse_variable
=
_is_sparse_variable
(
x
)
x_is_sparse_variable
=
_is_sparse_variable
(
x
)
y_is_sparse_variable
=
_is_sparse_variable
(
y
)
y_is_sparse_variable
=
_is_sparse_variable
(
y
)
if
not
x_is_sparse_variable
and
not
y_is_sparse_variable
:
if
not
x_is_sparse_variable
and
not
y_is_sparse_variable
:
raise
TypeError
()
raise
TypeError
()
return
_dot
(
x
,
y
)
return
_dot
(
x
,
y
)
...
@@ -1542,16 +1542,16 @@ class Usmm(gof.op.Op):
...
@@ -1542,16 +1542,16 @@ class Usmm(gof.op.Op):
"""
"""
def
__eq__
(
self
,
other
):
def
__eq__
(
self
,
other
):
return
type
(
self
)
==
type
(
other
)
return
type
(
self
)
==
type
(
other
)
def
__hash__
(
self
):
def
__hash__
(
self
):
return
hash
(
type
(
self
))
return
hash
(
type
(
self
))
def
__ne__
(
self
,
other
):
def
__ne__
(
self
,
other
):
return
not
(
self
==
other
)
return
not
(
self
==
other
)
def
__str__
(
self
):
def
__str__
(
self
):
return
'Usmm{no_inplace}'
return
'Usmm{no_inplace}'
def
infer_shape
(
self
,
node
,
shapes
):
def
infer_shape
(
self
,
node
,
shapes
):
xshp
,
yshp
=
shapes
xshp
,
yshp
=
shapes
x
,
y
=
node
.
inputs
x
,
y
=
node
.
inputs
...
@@ -1564,7 +1564,7 @@ class Usmm(gof.op.Op):
...
@@ -1564,7 +1564,7 @@ class Usmm(gof.op.Op):
if
x
.
ndim
==
1
and
y
.
ndim
==
1
:
if
x
.
ndim
==
1
and
y
.
ndim
==
1
:
return
[()]
return
[()]
raise
NotImplementedError
()
raise
NotImplementedError
()
def
make_node
(
self
,
alpha
,
x
,
y
,
z
):
def
make_node
(
self
,
alpha
,
x
,
y
,
z
):
if
not
_is_sparse_variable
(
x
)
and
not
_is_sparse_variable
(
y
):
if
not
_is_sparse_variable
(
x
)
and
not
_is_sparse_variable
(
y
):
# If x and y are tensor, we don't want to use this class
# If x and y are tensor, we don't want to use this class
...
@@ -1589,10 +1589,10 @@ class Usmm(gof.op.Op):
...
@@ -1589,10 +1589,10 @@ class Usmm(gof.op.Op):
def
perform
(
self
,
node
,
(
alpha
,
x
,
y
,
z
),
(
out
,
)):
def
perform
(
self
,
node
,
(
alpha
,
x
,
y
,
z
),
(
out
,
)):
x_is_sparse
=
_is_sparse
(
x
)
x_is_sparse
=
_is_sparse
(
x
)
y_is_sparse
=
_is_sparse
(
y
)
y_is_sparse
=
_is_sparse
(
y
)
if
not
x_is_sparse
and
not
y_is_sparse
:
if
not
x_is_sparse
and
not
y_is_sparse
:
raise
TypeError
(
x
)
raise
TypeError
(
x
)
rval
=
x
*
y
rval
=
x
*
y
if
isinstance
(
rval
,
scipy
.
sparse
.
spmatrix
):
if
isinstance
(
rval
,
scipy
.
sparse
.
spmatrix
):
rval
=
rval
.
toarray
()
rval
=
rval
.
toarray
()
...
@@ -1604,7 +1604,7 @@ class Usmm(gof.op.Op):
...
@@ -1604,7 +1604,7 @@ class Usmm(gof.op.Op):
rval
+=
z
# Faster because operation is inplace
rval
+=
z
# Faster because operation is inplace
else
:
else
:
rval
=
rval
+
z
rval
=
rval
+
z
out
[
0
]
=
rval
out
[
0
]
=
rval
usmm
=
Usmm
()
usmm
=
Usmm
()
...
@@ -1612,7 +1612,7 @@ class UsmmCscDense(gof.Op):
...
@@ -1612,7 +1612,7 @@ class UsmmCscDense(gof.Op):
"""
"""
Performs the expression is alpha * x y + z
Performs the expression is alpha * x y + z
This is an optimized operation for the case when x is in CSC format.
This is an optimized operation for the case when x is in CSC format.
x are sparse matrix
x are sparse matrix
y, z is a dense matrix
y, z is a dense matrix
alpha is a scalar
alpha is a scalar
...
@@ -1673,7 +1673,7 @@ class UsmmCscDense(gof.Op):
...
@@ -1673,7 +1673,7 @@ class UsmmCscDense(gof.Op):
y
=
tensor
.
cast
(
y
,
dtype_out
)
y
=
tensor
.
cast
(
y
,
dtype_out
)
if
dtype_out
!=
z
.
type
.
dtype
:
if
dtype_out
!=
z
.
type
.
dtype
:
z
=
tensor
.
cast
(
z
,
dtype_out
)
z
=
tensor
.
cast
(
z
,
dtype_out
)
if
node
.
inputs
[
1
]
.
type
.
dtype
in
(
'complex64'
,
'complex128'
):
if
node
.
inputs
[
1
]
.
type
.
dtype
in
(
'complex64'
,
'complex128'
):
raise
NotImplementedError
(
'Complex types are not supported for x_val'
)
raise
NotImplementedError
(
'Complex types are not supported for x_val'
)
if
node
.
inputs
[
5
]
.
type
.
dtype
in
(
'complex64'
,
'complex128'
):
if
node
.
inputs
[
5
]
.
type
.
dtype
in
(
'complex64'
,
'complex128'
):
...
@@ -1688,7 +1688,7 @@ class UsmmCscDense(gof.Op):
...
@@ -1688,7 +1688,7 @@ class UsmmCscDense(gof.Op):
def
c_support_code
(
self
):
def
c_support_code
(
self
):
return
blas
.
blas_header_text
()
return
blas
.
blas_header_text
()
def
c_libraries
(
self
):
def
c_libraries
(
self
):
return
blas
.
ldflags
()
return
blas
.
ldflags
()
...
@@ -1697,7 +1697,7 @@ class UsmmCscDense(gof.Op):
...
@@ -1697,7 +1697,7 @@ class UsmmCscDense(gof.Op):
def
c_lib_dirs
(
self
):
def
c_lib_dirs
(
self
):
return
blas
.
ldflags
(
libs
=
False
,
libs_dir
=
True
)
return
blas
.
ldflags
(
libs
=
False
,
libs_dir
=
True
)
def
c_header_dirs
(
self
):
def
c_header_dirs
(
self
):
return
blas
.
ldflags
(
libs
=
False
,
include_dir
=
True
)
return
blas
.
ldflags
(
libs
=
False
,
include_dir
=
True
)
...
@@ -1708,7 +1708,7 @@ class UsmmCscDense(gof.Op):
...
@@ -1708,7 +1708,7 @@ class UsmmCscDense(gof.Op):
raise
NotImplementedError
(
'Complex types are not supported for y'
)
raise
NotImplementedError
(
'Complex types are not supported for y'
)
if
node
.
inputs
[
6
]
.
type
.
dtype
!=
node
.
outputs
[
0
]
.
type
.
dtype
:
if
node
.
inputs
[
6
]
.
type
.
dtype
!=
node
.
outputs
[
0
]
.
type
.
dtype
:
raise
NotImplementedError
(
'z and output must have same type'
)
raise
NotImplementedError
(
'z and output must have same type'
)
if
node
.
inputs
[
1
]
.
type
.
dtype
==
"float32"
:
if
node
.
inputs
[
1
]
.
type
.
dtype
==
"float32"
:
conv_type
=
"float"
conv_type
=
"float"
axpy
=
"saxpy_"
axpy
=
"saxpy_"
...
@@ -1723,7 +1723,7 @@ class UsmmCscDense(gof.Op):
...
@@ -1723,7 +1723,7 @@ class UsmmCscDense(gof.Op):
typenum_zn
=
node
.
outputs
[
0
]
.
type
.
dtype_specs
()[
-
1
]
# retrieve dtype number
typenum_zn
=
node
.
outputs
[
0
]
.
type
.
dtype_specs
()[
-
1
]
# retrieve dtype number
inplace
=
int
(
self
.
inplace
)
inplace
=
int
(
self
.
inplace
)
rval
=
"""
rval
=
"""
if (
%(x_val)
s->nd != 1) {PyErr_SetString(PyExc_NotImplementedError, "rank(x_val) != 1");
%(fail)
s;}
if (
%(x_val)
s->nd != 1) {PyErr_SetString(PyExc_NotImplementedError, "rank(x_val) != 1");
%(fail)
s;}
if (
%(x_ind)
s->nd != 1) {PyErr_SetString(PyExc_NotImplementedError, "rank(x_ind) != 1");
%(fail)
s;}
if (
%(x_ind)
s->nd != 1) {PyErr_SetString(PyExc_NotImplementedError, "rank(x_ind) != 1");
%(fail)
s;}
...
@@ -1757,10 +1757,10 @@ class UsmmCscDense(gof.Op):
...
@@ -1757,10 +1757,10 @@ class UsmmCscDense(gof.Op):
if (
%(x_ptr)
s->dimensions[0] !=
%(y)
s->dimensions[0]+1)
if (
%(x_ptr)
s->dimensions[0] !=
%(y)
s->dimensions[0]+1)
{PyErr_SetString(PyExc_NotImplementedError, "x's number of columns doesn't match y's rows");
%(fail)
s;}
{PyErr_SetString(PyExc_NotImplementedError, "x's number of columns doesn't match y's rows");
%(fail)
s;}
if (
%(z)
s->dimensions[0] != ((npy_int32 *)
%(x_nrows)
s->data)[0] ||
%(z)
s->dimensions[1] !=
%(y)
s->dimensions[1])
if (
%(z)
s->dimensions[0] != ((npy_int32 *)
%(x_nrows)
s->data)[0] ||
%(z)
s->dimensions[1] !=
%(y)
s->dimensions[1])
{PyErr_SetString(PyExc_NotImplementedError, "The dimension of the allocated output doesn't match the correct output size.");
%(fail)
s;}
{PyErr_SetString(PyExc_NotImplementedError, "The dimension of the allocated output doesn't match the correct output size.");
%(fail)
s;}
if (PyArray_SIZE(
%(alpha)
s) != 1)
if (PyArray_SIZE(
%(alpha)
s) != 1)
{PyErr_SetString(PyExc_NotImplementedError, "The number of element in alpha must be 1");
%(fail)
s;}
{PyErr_SetString(PyExc_NotImplementedError, "The number of element in alpha must be 1");
%(fail)
s;}
...
@@ -1784,7 +1784,7 @@ class UsmmCscDense(gof.Op):
...
@@ -1784,7 +1784,7 @@ class UsmmCscDense(gof.Op):
Py_XDECREF(
%(zn)
s);
Py_XDECREF(
%(zn)
s);
%(zn)
s =
%(z)
s;
%(zn)
s =
%(z)
s;
Py_INCREF(
%(zn)
s);
Py_INCREF(
%(zn)
s);
}
}
else if (!
%(zn)
s
else if (!
%(zn)
s
|| (
%(zn)
s->dimensions[0] != ((npy_int32 *)
%(x_nrows)
s->data)[0])
|| (
%(zn)
s->dimensions[0] != ((npy_int32 *)
%(x_nrows)
s->data)[0])
|| (
%(zn)
s->dimensions[1] !=
%(y)
s->dimensions[1])
|| (
%(zn)
s->dimensions[1] !=
%(y)
s->dimensions[1])
...
@@ -1796,13 +1796,13 @@ class UsmmCscDense(gof.Op):
...
@@ -1796,13 +1796,13 @@ class UsmmCscDense(gof.Op):
dims[1] =
%(y)
s->dimensions[1];
dims[1] =
%(y)
s->dimensions[1];
%(zn)
s = (PyArrayObject*) PyArray_SimpleNew(2, dims,
%(typenum_zn)
s);
%(zn)
s = (PyArrayObject*) PyArray_SimpleNew(2, dims,
%(typenum_zn)
s);
}
}
{
{
// sparse array has size MxK, dense KxN, output MxN
// sparse array has size MxK, dense KxN, output MxN
npy_intp M =
%(zn)
s->dimensions[0];
npy_intp M =
%(zn)
s->dimensions[0];
npy_intp N =
%(zn)
s->dimensions[1];
npy_intp N =
%(zn)
s->dimensions[1];
npy_intp K =
%(y)
s->dimensions[0];
npy_intp K =
%(y)
s->dimensions[0];
// pointers to access actual data in the arrays passed as params.
// pointers to access actual data in the arrays passed as params.
dtype_
%(z)
s* __restrict__ Dz = (dtype_
%(z)
s*)
%(z)
s->data;
dtype_
%(z)
s* __restrict__ Dz = (dtype_
%(z)
s*)
%(z)
s->data;
dtype_
%(zn)
s* __restrict__ Dzn = (dtype_
%(zn)
s*)
%(zn)
s->data;
dtype_
%(zn)
s* __restrict__ Dzn = (dtype_
%(zn)
s*)
%(zn)
s->data;
...
@@ -1810,32 +1810,32 @@ class UsmmCscDense(gof.Op):
...
@@ -1810,32 +1810,32 @@ class UsmmCscDense(gof.Op):
const npy_int32 * __restrict__ Dind = (npy_int32*)
%(x_ind)
s->data;
const npy_int32 * __restrict__ Dind = (npy_int32*)
%(x_ind)
s->data;
const npy_int32 * __restrict__ Dptr = (npy_int32*)
%(x_ptr)
s->data;
const npy_int32 * __restrict__ Dptr = (npy_int32*)
%(x_ptr)
s->data;
const dtype_
%(alpha)
s alpha = ((dtype_
%(alpha)
s*)
%(alpha)
s->data)[0];
const dtype_
%(alpha)
s alpha = ((dtype_
%(alpha)
s*)
%(alpha)
s->data)[0];
npy_intp Sz =
%(z)
s->strides[1] /
%(z)
s->descr->elsize;
npy_intp Sz =
%(z)
s->strides[1] /
%(z)
s->descr->elsize;
npy_intp Szn =
%(zn)
s->strides[1] /
%(zn)
s->descr->elsize;
npy_intp Szn =
%(zn)
s->strides[1] /
%(zn)
s->descr->elsize;
npy_intp Sval =
%(x_val)
s->strides[0] /
%(x_val)
s->descr->elsize;
npy_intp Sval =
%(x_val)
s->strides[0] /
%(x_val)
s->descr->elsize;
npy_intp Sind =
%(x_ind)
s->strides[0] /
%(x_ind)
s->descr->elsize;
npy_intp Sind =
%(x_ind)
s->strides[0] /
%(x_ind)
s->descr->elsize;
npy_intp Sptr =
%(x_ptr)
s->strides[0] /
%(x_ptr)
s->descr->elsize;
npy_intp Sptr =
%(x_ptr)
s->strides[0] /
%(x_ptr)
s->descr->elsize;
npy_intp Sy =
%(y)
s->strides[1] /
%(y)
s->descr->elsize;
npy_intp Sy =
%(y)
s->strides[1] /
%(y)
s->descr->elsize;
if (!(
%(inplace)
s))
if (!(
%(inplace)
s))
{
{
memcpy(Dzn, Dz, M*N*sizeof(dtype_
%(zn)
s));
memcpy(Dzn, Dz, M*N*sizeof(dtype_
%(zn)
s));
}
}
for (npy_int32 k = 0; k < K; ++k)
for (npy_int32 k = 0; k < K; ++k)
{
{
for (npy_int32 m_idx = Dptr[k * Sptr]; m_idx < Dptr[(k+1)*Sptr]; ++m_idx)
for (npy_int32 m_idx = Dptr[k * Sptr]; m_idx < Dptr[(k+1)*Sptr]; ++m_idx)
{
{
const npy_int32 m = Dind[m_idx * Sind]; // row index of non-null value for column K
const npy_int32 m = Dind[m_idx * Sind]; // row index of non-null value for column K
const dtype_
%(x_val)
s Amk = alpha * Dval[m_idx * Sval]; // actual value at that location
const dtype_
%(x_val)
s Amk = alpha * Dval[m_idx * Sval]; // actual value at that location
const dtype_
%(y)
s* y_row = (dtype_
%(y)
s*)(
%(y)
s->data +
%(y)
s->strides[0] * k);
const dtype_
%(y)
s* y_row = (dtype_
%(y)
s*)(
%(y)
s->data +
%(y)
s->strides[0] * k);
const dtype_
%(zn)
s* z_row = (dtype_
%(zn)
s*)(
%(zn)
s->data +
%(zn)
s->strides[0] * m);
const dtype_
%(zn)
s* z_row = (dtype_
%(zn)
s*)(
%(zn)
s->data +
%(zn)
s->strides[0] * m);
%(axpy)
s((int*)&N, (
%(conv_type)
s*)&Amk, (
%(conv_type)
s*)y_row, (int*)&Sy, (
%(conv_type)
s*)z_row, (int*)&Szn);
%(axpy)
s((int*)&N, (
%(conv_type)
s*)&Amk, (
%(conv_type)
s*)y_row, (int*)&Sy, (
%(conv_type)
s*)z_row, (int*)&Szn);
}
}
}
}
...
@@ -1856,10 +1856,10 @@ register_specialize(local_usmm, name="local_usmm")
...
@@ -1856,10 +1856,10 @@ register_specialize(local_usmm, name="local_usmm")
def
local_usmm_csx
(
node
):
def
local_usmm_csx
(
node
):
if
node
.
op
==
usmm
:
if
node
.
op
==
usmm
:
alpha
,
x
,
y
,
z
=
node
.
inputs
alpha
,
x
,
y
,
z
=
node
.
inputs
x_is_sparse_variable
=
_is_sparse_variable
(
x
)
x_is_sparse_variable
=
_is_sparse_variable
(
x
)
y_is_sparse_variable
=
_is_sparse_variable
(
y
)
y_is_sparse_variable
=
_is_sparse_variable
(
y
)
if
x_is_sparse_variable
and
not
y_is_sparse_variable
:
if
x_is_sparse_variable
and
not
y_is_sparse_variable
:
if
x
.
type
.
format
==
'csc'
:
if
x
.
type
.
format
==
'csc'
:
x_val
,
x_ind
,
x_ptr
,
x_shape
=
csm_properties
(
x
)
x_val
,
x_ind
,
x_ptr
,
x_shape
=
csm_properties
(
x
)
...
...
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