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testgroup
pytensor
Commits
ae9139ac
提交
ae9139ac
authored
3月 29, 2017
作者:
Arnaud Bergeron
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Remove code that is never executed.
上级
48b65cb5
隐藏空白字符变更
内嵌
并排
正在显示
7 个修改的文件
包含
21 行增加
和
295 行删除
+21
-295
elemwise.py
theano/tensor/elemwise.py
+0
-15
conv.py
theano/tensor/nnet/conv.py
+17
-60
sigm.py
theano/tensor/nnet/sigm.py
+0
-44
test_nnet.py
theano/tensor/nnet/tests/test_nnet.py
+0
-3
opt.py
theano/tensor/opt.py
+0
-56
raw_random.py
theano/tensor/raw_random.py
+0
-2
test_opt.py
theano/tensor/tests/test_opt.py
+4
-115
没有找到文件。
theano/tensor/elemwise.py
浏览文件 @
ae9139ac
...
@@ -353,21 +353,6 @@ PyArray_SetBaseObject(%(res)s, (PyObject*)%(basename)s);
...
@@ -353,21 +353,6 @@ PyArray_SetBaseObject(%(res)s, (PyObject*)%(basename)s);
strides_statements
+
strides_statements
+
close_bracket
)
close_bracket
)
if
0
:
print
(
'C_CODE'
)
print
(
''
)
print
(
self
)
print
(
"IN BROAD"
,
self
.
input_broadcastable
)
print
(
"NEW ORDER"
,
self
.
new_order
)
print
(
"SHUFFLE"
,
self
.
shuffle
)
print
(
"AUGMENT"
,
self
.
augment
)
print
(
'------------'
)
print
(
''
)
print
(
full_code
)
if
0
:
sys
.
exit
()
return
full_code
%
dict
(
locals
(),
**
sub
)
return
full_code
%
dict
(
locals
(),
**
sub
)
def
c_code_cache_version
(
self
):
def
c_code_cache_version
(
self
):
...
...
theano/tensor/nnet/conv.py
浏览文件 @
ae9139ac
...
@@ -927,46 +927,14 @@ class ConvOp(OpenMPOp):
...
@@ -927,46 +927,14 @@ class ConvOp(OpenMPOp):
filters
=
filters
[:,
:,
::
-
1
,
::
-
1
]
# flip them
filters
=
filters
[:,
:,
::
-
1
,
::
-
1
]
# flip them
if
0
:
# find good value for the unroll
dw
=
ConvOp
(
imshp
,
kshp
,
nkern
,
bsize
,
1
,
1
,
output_mode
=
'valid'
,
unroll_batch
=
None
,
unroll_kern
=
None
,
unroll_patch
=
None
,
if
all_shape
and
un_b
!=
0
and
bsize
%
un_b
!=
0
:
imshp_logical
=
imshp_logical
,
if
bsize
<
un_b
:
kshp_logical
=
kshp_logical
,
un_b
=
bsize
kshp_logical_top_aligned
=
kshp_logical_top_aligned
,
else
:
version
=
self
.
version
,
un_b
=
1
direction_hint
=
'bprop weights'
,
_logger
.
warn
(
verbose
=
self
.
verbose
)
"Optimization Warning: in ConvOp.grad() we can't "
" determine a good unroll value for the batch."
" Maybe you can optimize this!"
)
if
all_shape
and
un_k
!=
0
and
nkern
%
un_k
!=
0
:
if
nkern
<
un_k
:
un_k
=
nkern
else
:
un_k
=
1
_logger
.
warn
(
"Optimization Warning: in ConvOp.grad() we can't"
" determine a good unroll value for the kernel. Maybe"
" you can optimize this!"
)
dw
=
ConvOp
(
imshp
,
kshp
,
nkern
,
bsize
,
1
,
1
,
output_mode
=
'valid'
,
unroll_batch
=
un_b
,
unroll_kern
=
un_k
,
unroll_patch
=
un_p
,
imshp_logical
=
imshp_logical
,
kshp_logical
=
kshp_logical
,
kshp_logical_top_aligned
=
kshp_logical_top_aligned
,
version
=
self
.
version
,
direction_hint
=
'bprop weights'
,
verbose
=
self
.
verbose
)
else
:
# let __init__ choose c params be chosen automatically from shapes
dw
=
ConvOp
(
imshp
,
kshp
,
nkern
,
bsize
,
1
,
1
,
output_mode
=
'valid'
,
unroll_batch
=
None
,
unroll_kern
=
None
,
unroll_patch
=
None
,
imshp_logical
=
imshp_logical
,
kshp_logical
=
kshp_logical
,
kshp_logical_top_aligned
=
kshp_logical_top_aligned
,
version
=
self
.
version
,
direction_hint
=
'bprop weights'
,
verbose
=
self
.
verbose
)
dw
=
dw
(
img
,
filters
)
dw
=
dw
(
img
,
filters
)
...
@@ -990,26 +958,15 @@ class ConvOp(OpenMPOp):
...
@@ -990,26 +958,15 @@ class ConvOp(OpenMPOp):
imshp_logical
=
(
self
.
nkern
,
self
.
fulloutshp
[
0
],
imshp_logical
=
(
self
.
nkern
,
self
.
fulloutshp
[
0
],
self
.
fulloutshp
[
1
])
self
.
fulloutshp
[
1
])
if
0
:
# hard-code c generation parameters
din
=
ConvOp
(
imshp
,
self
.
kshp
,
nkern
,
self
.
bsize
,
din
=
ConvOp
(
imshp
,
self
.
kshp
,
nkern
,
self
.
bsize
,
1
,
1
,
output_mode
=
mode
,
1
,
1
,
output_mode
=
mode
,
unroll_batch
=
None
,
unroll_kern
=
None
,
unroll_batch
=
un_b
,
unroll_kern
=
un_k
,
unroll_patch
=
None
,
unroll_patch
=
un_p
,
imshp_logical
=
imshp_logical
,
imshp_logical
=
imshp_logical
,
kshp_logical
=
None
,
kshp_logical
=
None
,
version
=-
1
,
# we we change the mode, we don't forward the version.
version
=-
1
,
# we we change the mode, we don't forward the version.
direction_hint
=
'bprop inputs'
,
direction_hint
=
'bprop inputs'
,
verbose
=
self
.
verbose
)
verbose
=
self
.
verbose
)
else
:
# let __init__ figure out the unrolling / patch sizes
din
=
ConvOp
(
imshp
,
self
.
kshp
,
nkern
,
self
.
bsize
,
1
,
1
,
output_mode
=
mode
,
unroll_batch
=
None
,
unroll_kern
=
None
,
unroll_patch
=
None
,
imshp_logical
=
imshp_logical
,
kshp_logical
=
None
,
version
=-
1
,
# we we change the mode, we don't forward the version.
direction_hint
=
'bprop inputs'
,
verbose
=
self
.
verbose
)
din
=
din
(
gz
,
filters
)
din
=
din
(
gz
,
filters
)
...
...
theano/tensor/nnet/sigm.py
浏览文件 @
ae9139ac
...
@@ -1014,47 +1014,3 @@ register_local_1msigmoid = False
...
@@ -1014,47 +1014,3 @@ register_local_1msigmoid = False
if
register_local_1msigmoid
:
if
register_local_1msigmoid
:
opt
.
register_canonicalize
(
local_1msigmoid
)
opt
.
register_canonicalize
(
local_1msigmoid
)
if
0
:
# This code is if'd out because it is not complete,
# and it isn't obviously a good idea anyway.
# The motivation here was to identify the last exp() node
# in the SciPy2010 article, which was not optimized away at the time of publication,
# so the example is actually not numerically stable, even though it should be.
@opt.register_stabilize
@gof.local_optimizer
([
tensor
.
mul
])
def
local_sigm_gest
(
node
):
print
(
"CANONICALIZE"
)
print
(
sigm_canonicalize
(
node
))
def
sigm_canonicalize
(
node
):
mul
=
tensor
.
mul
div
=
tensor
.
true_div
if
node
.
op
==
tensor
.
add
:
rval
=
[]
for
i
in
node
.
inputs
:
rval
+=
sigm_canonicalize
(
i
)
return
rval
if
node
.
op
==
tensor
.
mul
:
rval
=
sigm_canonicalize
(
node
.
inputs
[
0
])
for
i
in
node
.
inputs
[
1
:]:
old_rval
=
rval
rval
=
[]
for
t1
in
sigm_canonicalize
(
i
):
for
t0
in
old_rval
:
assert
t1
.
owner
.
op
==
div
assert
t0
.
owner
.
op
==
div
t0top
,
t0bot
=
t0
.
owner
.
inputs
t1top
,
t1bot
=
t1
.
owner
.
inputs
rval
.
append
(
div
(
mul
(
*
(
t0top
+
t1top
)),
mul
(
*
(
t0bot
+
t1bot
))))
if
len
(
rval
)
>
100
:
# This loop can be exponentially long.
# aborting
return
[]
elif
len
(
node
.
outputs
)
>
1
:
return
[]
else
:
return
[
node
.
outputs
[
0
]]
theano/tensor/nnet/tests/test_nnet.py
浏览文件 @
ae9139ac
...
@@ -1441,9 +1441,6 @@ def test_asymptotic_32():
...
@@ -1441,9 +1441,6 @@ def test_asymptotic_32():
c
=
categorical_crossentropy
(
softmax
(
x
+
x2
),
y
)
c
=
categorical_crossentropy
(
softmax
(
x
+
x2
),
y
)
f
=
theano
.
function
([
x
,
y
,
x2
],
[
c
.
sum
(),
f
=
theano
.
function
([
x
,
y
,
x2
],
[
c
.
sum
(),
tensor
.
grad
(
c
.
sum
(),
x
)],
mode
=
'FAST_RUN'
)
tensor
.
grad
(
c
.
sum
(),
x
)],
mode
=
'FAST_RUN'
)
if
0
:
for
i
,
n
in
enumerate
(
f
.
maker
.
fgraph
.
toposort
()):
print
(
i
,
n
)
xval
=
numpy
.
zeros
((
5
,
5
),
dtype
=
dtype
)
.
astype
(
dtype
)
xval
=
numpy
.
zeros
((
5
,
5
),
dtype
=
dtype
)
.
astype
(
dtype
)
x2val
=
numpy
.
zeros
(
5
,
dtype
=
xval
.
dtype
)
.
astype
(
dtype
)
x2val
=
numpy
.
zeros
(
5
,
dtype
=
xval
.
dtype
)
.
astype
(
dtype
)
...
...
theano/tensor/opt.py
浏览文件 @
ae9139ac
...
@@ -4510,45 +4510,6 @@ def local_reshape_lift(node):
...
@@ -4510,45 +4510,6 @@ def local_reshape_lift(node):
return
[
re
]
return
[
re
]
if
0
:
# TODO: Test that this optimziation works.
# TODO: Once it works, copy over stacktrace appropriately.
@register_canonicalize
@gof.local_optimizer
([
T
.
Reshape
])
def
local_scalar_reshape
(
node
):
"""Eliminate reshape Ops whose inputs and outputs are scalars """
if
isinstance
(
node
.
op
,
T
.
Reshape
):
x
,
shp
=
node
.
inputs
if
x
.
ndim
==
0
and
T
.
get_vector_length
(
shp
)
==
0
:
return
[
x
]
if
0
:
# TODO: Finish writing and testing this optimization. The idea is
# that if we can prove the output to this sum has a
# zero-size dimension, then it can be replaced by an
# appropriately typed and broadcasted zero.
# TODO: Remember to take into account the new sum dtype argument if this
# optimization is enabled.
# TODO: Once it works, copy over stacktrace appropriately.
@register_canonicalize
@gof.local_optimizer
([
T
.
Sum
])
def
local_sum_over_empty
(
node
):
if
isinstance
(
node
.
op
,
T
.
Sum
):
# This optimization needs ShapeOpt and fgraph.shape_feature
if
not
hasattr
(
node
.
fgraph
,
'shape_feature'
):
return
y
,
=
node
.
outputs
y_shape
=
node
.
fgraph
.
shape_feature
.
shape_of
[
y
]
def
tmp
(
thing
):
try
:
return
T
.
get_scalar_constant_value
(
thing
,
only_process_constants
=
True
)
except
(
TypeError
,
ValueError
)
as
e
:
print
(
e
,
thing
.
owner
.
inputs
[
0
])
return
None
print
(
'LOCAL SUM EMPTY'
,
[
tmp
(
s
)
for
s
in
y_shape
])
##################
##################
# Middleman cuts #
# Middleman cuts #
##################
##################
...
@@ -4657,23 +4618,6 @@ class Canonizer(gof.LocalOptimizer):
...
@@ -4657,23 +4618,6 @@ class Canonizer(gof.LocalOptimizer):
# argument. The leaf-Variables of the graph covered by the
# argument. The leaf-Variables of the graph covered by the
# recursion may be of any Variable type.
# recursion may be of any Variable type.
if
0
:
# UPDATE: This logic makes it impossible to recognize some
# important patterns (e.g. variants on the x/x) and it is
# screwing up the RBM free energy gradient.
# TODO: review this
if
len
(
input
.
clients
)
>
1
:
# this logic is too conservative, but doing it is
# better than not doing it.
#
# we don't want to canonize a subgraph that we will
# need to compute anyway for the other clients.
# This check is too conservative because if the other
# clients are also in the subgraph we are canonizing,
# then we should [probably?] recurse anyway.
return
[
input
],
[]
if
input
.
owner
is
None
or
input
.
owner
.
op
not
in
[
if
input
.
owner
is
None
or
input
.
owner
.
op
not
in
[
self
.
main
,
self
.
inverse
,
self
.
reciprocal
]:
self
.
main
,
self
.
inverse
,
self
.
reciprocal
]:
if
input
.
owner
and
isinstance
(
input
.
owner
.
op
,
T
.
DimShuffle
):
if
input
.
owner
and
isinstance
(
input
.
owner
.
op
,
T
.
DimShuffle
):
...
...
theano/tensor/raw_random.py
浏览文件 @
ae9139ac
...
@@ -203,8 +203,6 @@ class RandomFunction(gof.Op):
...
@@ -203,8 +203,6 @@ class RandomFunction(gof.Op):
assert
(
shape
.
type
.
dtype
==
'int64'
)
or
(
shape
.
type
.
dtype
==
'int32'
)
assert
(
shape
.
type
.
dtype
==
'int64'
)
or
(
shape
.
type
.
dtype
==
'int32'
)
if
not
isinstance
(
r
.
type
,
RandomStateType
):
if
not
isinstance
(
r
.
type
,
RandomStateType
):
print
(
'WARNING: RandomState instances should be in RandomStateType'
,
file
=
sys
.
stderr
)
print
(
'WARNING: RandomState instances should be in RandomStateType'
,
file
=
sys
.
stderr
)
if
0
:
raise
TypeError
(
'r must be RandomStateType instance'
,
r
)
# the following doesn't work because we want to ignore the
# the following doesn't work because we want to ignore the
# broadcastable flags in shape.type
# broadcastable flags in shape.type
# assert shape.type == tensor.lvector
# assert shape.type == tensor.lvector
...
...
theano/tensor/tests/test_opt.py
浏览文件 @
ae9139ac
...
@@ -1285,108 +1285,6 @@ class test_fusion(unittest.TestCase):
...
@@ -1285,108 +1285,6 @@ class test_fusion(unittest.TestCase):
print
(
"time"
,
self
.
do
(
self
.
mode
,
self
.
_shared
,
shp
=
(
1000
,
1000
),
print
(
"time"
,
self
.
do
(
self
.
mode
,
self
.
_shared
,
shp
=
(
1000
,
1000
),
assert_len_topo
=
False
,
slice
=
s
,
nb_repeat
=
100
))
assert_len_topo
=
False
,
slice
=
s
,
nb_repeat
=
100
))
def
tes_memory_leak
(
self
,
mode
=
compile
.
mode
.
Mode
(
'c'
,
'merge'
),
shared_fn
=
shared
,
shp
=
(
3000
,
3000
),
gpu
=
False
,
nb_repeat
=
30
,
assert_len_topo
=
True
,
slice
=
None
):
"""
param shared_fn: if None, will use compile.function
verify that the elemwise fusion work
Test with and without DimShuffle
"""
# TODO: disable the canonizer?
fx
=
fmatrices
(
'x'
)
fy
=
fmatrices
(
'y'
)
fxv
=
np
.
zeros
(
shp
,
dtype
=
'float32'
)
+
2
cases
=
[
(
fx
,
(
fx
),
(
fxv
),
'float32'
),
# 1
]
import
gc
import
pdb
import
objgraph
import
weakref
d
=
{}
dl
=
[]
v1
=
None
mode
=
compile
.
mode
.
Mode
(
'c'
,
'merge'
)
# TODO: if mode is Mode('py','merge') then their is no memory leak!
from
theano.compile.function_module
import
orig_function
for
id
,
[
g
,
sym_inputs
,
val_inputs
,
out_dtype
]
in
enumerate
(
cases
):
for
zzzz
in
xrange
(
nb_repeat
):
v
=
np
.
zeros
(
shp
,
dtype
=
out_dtype
)
gc
.
collect
()
gc
.
collect
()
gc
.
collect
()
v1
=
weakref
.
ref
(
v
)
# noqa
pdb
.
set_trace
()
# no memory leak
# f = orig_function([compile.In(fx),compile.In(variable=fy, value=None)],
# [fy+fx],mode=mode)
# memory leak
f
=
orig_function
(
# noqa
[
compile
.
In
(
fx
),
compile
.
In
(
variable
=
fy
,
value
=
v
)],
[
fy
+
fx
],
mode
=
mode
)
del
v
gc
.
collect
()
gc
.
collect
()
gc
.
collect
()
pdb
.
set_trace
()
if
False
:
gc
.
collect
()
gc
.
collect
()
gc
.
collect
()
nd
=
objgraph
.
typestats
()
print
(
'key, old val, new val, diff'
)
for
key
in
set
(
d
.
keys
()
+
nd
.
keys
()):
if
key
in
d
and
key
in
nd
and
nd
[
key
]
!=
d
[
key
]:
print
(
key
,
d
.
get
(
key
),
nd
.
get
(
key
),
end
=
' '
)
if
key
in
d
and
key
in
nd
:
print
(
nd
[
key
]
-
d
[
key
])
else
:
print
(
None
)
gc
.
collect
()
gc
.
collect
()
gc
.
collect
()
d
=
nd
# pdb.set_trace()
if
False
:
gc
.
collect
()
gc
.
collect
()
gc
.
collect
()
ndl
=
objgraph
.
by_type
(
'list'
)
ll
=
[]
if
len
(
dl
)
>
0
:
nb
=
0
for
x
in
ndl
:
cmp
=
not
isinstance
(
x
,
list
)
if
not
cmp
and
x
:
cmp
=
(
x
[
0
]
.
__class__
.
__name__
!=
'array_converter'
)
if
cmp
:
cmp
=
x
[
0
]
!=
'Option'
if
cmp
:
cmp
=
x
[
0
]
!=
270
cmp
=
False
if
cmp
and
x
in
dl
:
nb
+=
1
ll
.
append
(
x
)
# pdb.set_trace()
pass
pdb
.
set_trace
()
dl
=
ndl
gc
.
collect
()
gc
.
collect
()
gc
.
collect
()
# objgraph.show_most_common_types(limit=40)
# f(*val_inputs)
gc
.
collect
()
gc
.
collect
()
gc
.
collect
()
# cases[id]=None #to remove g, that link to out that link to the ndarray!
# g.owner.inputs[0] is out... make owner a weakref?
class
TimesN
(
theano
.
scalar
.
basic
.
UnaryScalarOp
):
class
TimesN
(
theano
.
scalar
.
basic
.
UnaryScalarOp
):
"""Used in test TestCompositeCodegen
"""Used in test TestCompositeCodegen
...
@@ -1506,19 +1404,10 @@ def test_log1p():
...
@@ -1506,19 +1404,10 @@ def test_log1p():
f
([
1e-7
,
10
],
[[
0
,
0
],
[
0
,
0
]])
# debugmode will verify values
f
([
1e-7
,
10
],
[[
0
,
0
],
[
0
,
0
]])
# debugmode will verify values
if
0
:
# should work for int
# at one point this worked, but it has been broken since
z
=
tensor
.
imatrix
()
# the constant up-casting made 1 -> 1.0+0.0j
f
=
function
([
z
],
T
.
log
(
1
+
(
z
)),
mode
=
m
)
# I was never sure if this optimization should work on complex numbers or not.
assert
[
node
.
op
for
node
in
f
.
maker
.
fgraph
.
toposort
()]
==
[
T
.
log1p
]
z
=
tensor
.
zmatrix
()
f
=
function
([
z
],
T
.
log
(
1
+
(
z
)),
mode
=
m
)
assert
[
node
.
op
for
node
in
f
.
maker
.
fgraph
.
toposort
()]
==
[
T
.
log1p
]
if
1
:
# should work for int
z
=
tensor
.
imatrix
()
f
=
function
([
z
],
T
.
log
(
1
+
(
z
)),
mode
=
m
)
assert
[
node
.
op
for
node
in
f
.
maker
.
fgraph
.
toposort
()]
==
[
T
.
log1p
]
def
test_log_add
():
def
test_log_add
():
...
...
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