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testgroup
pytensor
Commits
88476b4f
提交
88476b4f
authored
7月 04, 2025
作者:
Abhinav-Khot
提交者:
Ricardo Vieira
7月 08, 2025
浏览文件
操作
浏览文件
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电子邮件补丁
差异文件
Add support for negative values in psi
上级
7799bd08
隐藏空白字符变更
内嵌
并排
正在显示
2 个修改的文件
包含
39 行增加
和
53 行删除
+39
-53
math.py
pytensor/scalar/math.py
+37
-51
test_math.py
tests/scalar/test_math.py
+2
-2
没有找到文件。
pytensor/scalar/math.py
浏览文件 @
88476b4f
...
@@ -378,17 +378,6 @@ class Psi(UnaryScalarOp):
...
@@ -378,17 +378,6 @@ class Psi(UnaryScalarOp):
def
c_support_code
(
self
,
**
kwargs
):
def
c_support_code
(
self
,
**
kwargs
):
return
"""
return
"""
// For GPU support
#ifdef WITHIN_KERNEL
#define DEVICE WITHIN_KERNEL
#else
#define DEVICE
#endif
#ifndef ga_double
#define ga_double double
#endif
#ifndef M_PI
#ifndef M_PI
#define M_PI 3.14159265358979323846
#define M_PI 3.14159265358979323846
#endif
#endif
...
@@ -397,51 +386,48 @@ class Psi(UnaryScalarOp):
...
@@ -397,51 +386,48 @@ class Psi(UnaryScalarOp):
#define _PSIFUNCDEFINED
#define _PSIFUNCDEFINED
DEVICE double _psi(ga_double x) {
DEVICE double _psi(ga_double x) {
/*taken from
/*taken from
Bernardo, J. M. (1976). Algorithm AS 103:
Bernardo, J. M. (1976). Algorithm AS 103:
Psi (Digamma) Function. Applied Statistics. 25 (3), 315-317.
Psi (Digamma) Function. Applied Statistics. 25 (3), 315-317.
http://www.uv.es/~bernardo/1976AppStatist.pdf
http://www.uv.es/~bernardo/1976AppStatist.pdf
*/
*/
ga_double y, R, psi_ = 0;
ga_double S = 1.0e-5;
ga_double C = 8.5;
ga_double S3 = 8.333333333e-2;
ga_double S4 = 8.333333333e-3;
ga_double S5 = 3.968253968e-3;
ga_double D1 = -0.5772156649;
if (x <= 0) {
// the digamma function approaches infinity from one side and -infinity from the other, around negative integers and zero
if (x == floor(x)) {
return INFINITY; // note that scipy returns -INF for 0 and NaN for negative integers
}
// Use reflection formula
double y, R, psi_ = 0;
ga_double pi_x = M_PI * x;
double S = 1.0e-5;
ga_double cot_pi_x = cos(pi_x) / sin(pi_x);
double C = 8.5;
return _psi(1.0 - x) + M_PI * cot_pi_x;
double S3 = 8.333333333e-2;
}
double S4 = 8.333333333e-3;
double S5 = 3.968253968e-3;
double D1 = -0.5772156649;
y = x;
if (x <= 0) {
// the digamma function approaches infinity from one side and -infinity from the other, around negative integers and zero
if (x == floor(x)) {
return INFINITY; // note that scipy returns -INF for 0 and NaN for negative integers
}
// Use reflection formula
ga_double pi_x = M_PI * x;
ga_double cot_pi_x = cos(pi_x) / sin(pi_x);
return _psi(1.0 - x) - M_PI * cot_pi_x;
}
if (y <= 0)
y = x;
return psi_;
if (y <= S)
if (y <= S)
return D1 - 1.0/y;
return D1 - 1.0/y;
while (y < C) {
while (y < C) {
psi_ = psi_ - 1.0 / y;
psi_ = psi_ - 1.0 / y;
y = y + 1;
y = y + 1;
}
}
R = 1.0 / y;
R = 1.0 / y;
psi_ = psi_ + log(y) - .5 * R ;
psi_ = psi_ + log(y) - .5 * R ;
R= R*R;
R= R*R;
psi_ = psi_ - R * (S3 - R * (S4 - R * S5));
psi_ = psi_ - R * (S3 - R * (S4 - R * S5));
return psi_;
return psi_;
}
}
#endif
#endif
"""
"""
...
@@ -450,8 +436,8 @@ class Psi(UnaryScalarOp):
...
@@ -450,8 +436,8 @@ class Psi(UnaryScalarOp):
(
x
,)
=
inp
(
x
,)
=
inp
(
z
,)
=
out
(
z
,)
=
out
if
node
.
inputs
[
0
]
.
type
in
float_types
:
if
node
.
inputs
[
0
]
.
type
in
float_types
:
return
f
"""{z} =
dtype
=
"npy_"
+
node
.
outputs
[
0
]
.
dtype
_psi({x});""
"
return
f
"{z} = ({dtype}) _psi({x});
"
raise
NotImplementedError
(
"only floating point is implemented"
)
raise
NotImplementedError
(
"only floating point is implemented"
)
...
...
tests/scalar/test_math.py
浏览文件 @
88476b4f
...
@@ -155,7 +155,7 @@ def test_scalarloop_grad_mixed_dtypes(op, scalar_loop_grads):
...
@@ -155,7 +155,7 @@ def test_scalarloop_grad_mixed_dtypes(op, scalar_loop_grads):
@pytest.mark.parametrize
(
@pytest.mark.parametrize
(
"linker"
,
"linker"
,
[
"py"
,
"c"
],
[
"py"
,
"c
vm
"
],
)
)
def
test_psi
(
linker
):
def
test_psi
(
linker
):
x
=
float64
(
"x"
)
x
=
float64
(
"x"
)
...
@@ -164,7 +164,7 @@ def test_psi(linker):
...
@@ -164,7 +164,7 @@ def test_psi(linker):
fn
=
function
([
x
],
out
,
mode
=
Mode
(
linker
=
linker
,
optimizer
=
"fast_run"
))
fn
=
function
([
x
],
out
,
mode
=
Mode
(
linker
=
linker
,
optimizer
=
"fast_run"
))
fn
.
dprint
()
fn
.
dprint
()
x_test
=
np
.
float64
(
0.
5
)
x_test
=
np
.
float64
(
0.
7
)
np
.
testing
.
assert_allclose
(
np
.
testing
.
assert_allclose
(
fn
(
x_test
),
fn
(
x_test
),
...
...
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