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pytensor
Commits
808f855b
提交
808f855b
authored
7月 05, 2017
作者:
notoraptor
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Remove module `nerv`.
上级
13ff40a3
隐藏空白字符变更
内嵌
并排
正在显示
5 个修改的文件
包含
7 行增加
和
481 行删除
+7
-481
op.txt
doc/library/gpuarray/op.txt
+0
-3
__init__.py
theano/gpuarray/__init__.py
+1
-1
gemm16.c
theano/gpuarray/gemm16.c
+0
-236
nerv.py
theano/gpuarray/nerv.py
+6
-192
test_nerv.py
theano/gpuarray/tests/test_nerv.py
+0
-49
没有找到文件。
doc/library/gpuarray/op.txt
浏览文件 @
808f855b
...
@@ -22,9 +22,6 @@ Blas Op
...
@@ -22,9 +22,6 @@ Blas Op
.. automodule:: theano.gpuarray.blas
.. automodule:: theano.gpuarray.blas
:members:
:members:
.. automodule:: theano.gpuarray.nerv
:members:
Elemwise Op
Elemwise Op
===========
===========
...
...
theano/gpuarray/__init__.py
浏览文件 @
808f855b
...
@@ -29,7 +29,7 @@ from .type import (GpuArrayType, GpuArrayVariable, GpuArrayConstant,
...
@@ -29,7 +29,7 @@ from .type import (GpuArrayType, GpuArrayVariable, GpuArrayConstant,
GpuArraySharedVariable
,
gpuarray_shared_constructor
,
GpuArraySharedVariable
,
gpuarray_shared_constructor
,
reg_context
,
get_context
,
ContextNotDefined
)
reg_context
,
get_context
,
ContextNotDefined
)
from
.basic_ops
import
as_gpuarray_variable
from
.basic_ops
import
as_gpuarray_variable
from
.
import
fft
,
dnn
,
opt
,
nerv
,
extra_ops
,
multinomial
,
reduction
,
rng_mrg
from
.
import
fft
,
dnn
,
opt
,
extra_ops
,
multinomial
,
reduction
,
rng_mrg
def
transfer
(
x
,
target
):
def
transfer
(
x
,
target
):
...
...
theano/gpuarray/gemm16.c
deleted
100644 → 0
浏览文件 @
13ff40a3
#section init_code_struct
/* Why do we need this? */
size_t
dim
=
2048
*
32
;
rand_buf
=
pygpu_empty
(
1
,
&
dim
,
GA_UINT
,
GA_C_ORDER
,
PARAMS
,
Py_None
);
if
(
rand_buf
==
NULL
)
{
FAIL
;
}
#section support_code_struct
PyGpuArrayObject
*
rand_buf
;
int
gemm16
(
PyGpuArrayObject
*
C
,
float
alpha
,
PyGpuArrayObject
*
A
,
PyGpuArrayObject
*
B
,
float
beta
,
PyGpuArrayObject
**
out
,
PyGpuContextObject
*
c
)
{
PyGpuArrayObject
*
_A
=
NULL
;
PyGpuArrayObject
*
_B
=
NULL
;
GpuKernel
*
gk
;
char
*
prand
,
*
pA
,
*
pB
,
*
pout
;
void
*
params
[
13
];
size_t
grid
[
2
];
size_t
threads
[
2
];
int
res
=
0
;
int
flags
=
0
;
int
lda
,
ldb
,
ldc
,
n
,
m
,
k
;
int
n128
,
n64
;
int
size
=
0
;
int
vec
=
0
;
static
unsigned
int
nprocs
=
0
;
char
opA
,
opB
;
if
(
GpuArray_CHKFLAGS
(
&
A
->
ga
,
GA_FARRAY
)
&&
GpuArray_CHKFLAGS
(
&
B
->
ga
,
GA_FARRAY
))
{
/*
* The nervana kernels do not cover the case where both inputs are
* trans so we need to copy one of them. We choose the smallest
* one.
*/
if
(
PyGpuArray_DIM
(
A
,
0
)
*
PyGpuArray_DIM
(
A
,
1
)
<
PyGpuArray_DIM
(
B
,
0
)
*
PyGpuArray_DIM
(
B
,
1
))
{
_A
=
pygpu_copy
(
A
,
GA_C_ORDER
);
if
(
_A
==
NULL
)
{
res
=
1
;
goto
cleanup
;
}
/*
* This is not an extra reference on _A so don't add an INCREF.
* Also, we don't lose the ref on A since our caller will deal
* with it.
*/
A
=
_A
;
}
else
{
_B
=
pygpu_copy
(
B
,
GA_C_ORDER
);
if
(
_B
==
NULL
)
{
res
=
1
;
goto
cleanup
;
}
/*
* This is not an extra reference on _B so don't add an INCREF
* Also, we don't lose the ref on B since our caller will deal
* with it.
*/
B
=
_B
;
}
}
if
(
GEMM16_INPLACE
&&
GpuArray_CHKFLAGS
(
&
C
->
ga
,
GA_CARRAY
))
{
Py_XDECREF
(
*
out
);
*
out
=
C
;
Py_INCREF
(
*
out
);
}
else
{
*
out
=
theano_try_copy
(
*
out
,
C
);
if
(
*
out
==
NULL
)
{
res
=
1
;
goto
cleanup
;
}
}
if
(
GpuArray_CHKFLAGS
(
&
A
->
ga
,
GA_FARRAY
))
{
opA
=
't'
;
lda
=
PyGpuArray_STRIDE
(
A
,
1
);
}
else
{
opA
=
'n'
;
lda
=
PyGpuArray_STRIDE
(
A
,
0
);
}
if
(
GpuArray_CHKFLAGS
(
&
B
->
ga
,
GA_FARRAY
))
{
opB
=
't'
;
ldb
=
PyGpuArray_STRIDE
(
B
,
1
);
}
else
{
opB
=
'n'
;
ldb
=
PyGpuArray_STRIDE
(
B
,
0
);
}
ldc
=
PyGpuArray_STRIDE
(
*
out
,
0
);
/* lda and friend are in number of elements, not bytes */
lda
/=
2
;
ldb
/=
2
;
ldc
/=
2
;
m
=
PyGpuArray_DIM
(
*
out
,
0
);
n
=
PyGpuArray_DIM
(
*
out
,
1
);
k
=
PyGpuArray_DIM
(
B
,
0
);
/* Tuning code adapted from the python version */
grid
[
0
]
=
(
m
+
127
)
/
128
;
if
(
opA
==
'n'
&&
opB
==
't'
)
size
=
128
;
else
{
if
(
n
<
384
-
16
)
{
n128
=
n
%
128
;
if
(
n128
<
112
)
{
if
(
48
<
n128
&&
n128
<=
64
)
{
n64
=
n
/
64
;
if
(
nprocs
==
0
)
if
(
gpucontext_property
(
A
->
context
->
ctx
,
GA_CTX_PROP_NUMPROCS
,
&
nprocs
))
{
nprocs
=
0
;
res
=
1
;
goto
cleanup
;
}
n64
*=
(
grid
[
0
]
/
nprocs
);
if
(
n64
>
1
||
(
opA
==
't'
&&
opB
==
'n'
))
size
=
64
;
else
size
=
32
;
}
else
{
size
=
32
;
}
}
else
{
size
=
128
;
}
}
else
{
size
=
128
;
}
}
grid
[
1
]
=
(
n
+
(
size
-
1
))
/
size
;
if
(
size
==
128
)
threads
[
0
]
=
256
;
else
threads
[
0
]
=
128
;
threads
[
1
]
=
1
;
if
((
opA
==
't'
&&
opB
==
'n'
&&
m
%
8
==
0
&&
n
%
8
==
0
)
||
(
opA
==
'n'
&&
opB
==
'n'
&&
k
%
16
==
0
&&
n
%
8
==
0
)
||
(
opA
==
'n'
&&
opB
==
't'
&&
k
%
16
==
0
))
vec
=
1
;
switch
(
size
)
{
case
128
:
if
(
opA
==
'n'
&&
opB
==
'n'
)
{
if
(
vec
)
gk
=
&
k_nn_vec_128x128
;
else
gk
=
&
k_nn_128x128
;
}
else
if
(
opA
==
'n'
&&
opB
==
't'
)
{
if
(
vec
)
gk
=
&
k_nt_vec_128x128
;
else
gk
=
&
k_nt_128x128
;
}
else
if
(
opA
==
't'
&&
opB
==
'n'
)
{
if
(
vec
)
gk
=
&
k_tn_vec_128x128
;
else
gk
=
&
k_tn_128x128
;
}
break
;
case
64
:
if
(
opA
==
'n'
&&
opB
==
'n'
)
{
if
(
vec
)
gk
=
&
k_nn_vec_128x64
;
else
gk
=
&
k_nn_128x64
;
}
else
if
(
opA
==
't'
&&
opB
==
'n'
)
{
if
(
vec
)
gk
=
&
k_tn_vec_128x64
;
else
gk
=
&
k_tn_128x64
;
}
break
;
case
32
:
if
(
opA
==
'n'
&&
opB
==
'n'
)
{
if
(
vec
)
gk
=
&
k_nn_vec_128x32
;
else
gk
=
&
k_nn_128x32
;
}
else
if
(
opA
==
't'
&&
opB
==
'n'
)
{
if
(
vec
)
gk
=
&
k_tn_vec_128x32
;
else
gk
=
&
k_tn_128x32
;
}
break
;
default:
PyErr_SetString
(
PyExc_RuntimeError
,
"error selecting kernel"
);
res
=
1
;
goto
cleanup
;
}
prand
=
*
((
char
**
)
rand_buf
->
ga
.
data
);
prand
+=
rand_buf
->
ga
.
offset
;
pA
=
*
((
char
**
)
A
->
ga
.
data
);
pA
+=
A
->
ga
.
offset
;
pB
=
*
((
char
**
)
B
->
ga
.
data
);
pB
+=
B
->
ga
.
offset
;
pout
=
*
((
char
**
)(
*
out
)
->
ga
.
data
);
pout
+=
(
*
out
)
->
ga
.
offset
;
params
[
0
]
=
&
prand
;
params
[
1
]
=
&
pA
;
params
[
2
]
=
&
pB
;
params
[
3
]
=
&
pout
;
params
[
4
]
=
&
lda
;
params
[
5
]
=
&
ldb
;
params
[
6
]
=
&
ldc
;
params
[
7
]
=
&
m
;
params
[
8
]
=
&
n
;
params
[
9
]
=
&
k
;
params
[
10
]
=
&
alpha
;
params
[
11
]
=
&
beta
;
params
[
12
]
=
&
flags
;
if
(
GpuKernel_call
(
gk
,
2
,
grid
,
threads
,
0
,
params
)
!=
GA_NO_ERROR
)
{
PyErr_SetString
(
PyExc_RuntimeError
,
"error in gemm16 kernel call"
);
res
=
1
;
}
cleanup:
Py_XDECREF
(
_A
);
Py_XDECREF
(
_B
);
return
res
;
}
theano/gpuarray/nerv.py
浏览文件 @
808f855b
from
__future__
import
absolute_import
,
print_function
,
division
from
nose.plugins.skip
import
SkipTest
import
os.path
import
theano
from
theano
import
Apply
,
Variable
,
tensor
from
theano.compile
import
optdb
raise
SkipTest
(
"You are importing theano.gpuarray.nerv. "
from
theano.compile.ops
import
shape_i
"This module was removed as it was based on nervanagpu that is now deprecated. "
from
theano.gof
import
local_optimizer
,
COp
"To still get this module, use Theano 0.9. "
from
theano.scalar
import
as_scalar
,
constant
"More info about nervanagpu here: https://github.com/NervanaSystems/nervanagpu "
"(viewed on 2017/07/05)."
)
from
.
import
opt
from
.basic_ops
import
(
as_gpuarray_variable
,
GpuAllocEmpty
,
infer_context_name
)
from
.type
import
gpu_context_type
from
.opt_util
import
alpha_merge
,
output_merge
try
:
from
nervanagpu.nervanagpu
import
GPUTensor
,
NervanaGPU
nerv
=
NervanaGPU
()
except
ImportError
:
GPUTensor
=
None
nerv
=
None
def
to_gputensor
(
a
):
assert
a
.
flags
.
c_contiguous
or
a
.
flags
.
f_contiguous
return
GPUTensor
(
a
.
shape
,
dtype
=
a
.
dtype
,
base
=
a
,
gpudata
=
a
.
gpudata
+
a
.
offset
,
strides
=
a
.
strides
,
is_trans
=
a
.
flags
.
f_contiguous
)
def
ensure_float
(
val
,
name
):
if
not
isinstance
(
val
,
Variable
):
val
=
constant
(
val
)
if
hasattr
(
val
,
'ndim'
)
and
val
.
ndim
==
0
:
val
=
as_scalar
(
val
)
if
not
isinstance
(
val
.
type
,
theano
.
scalar
.
Scalar
):
raise
TypeError
(
"
%
s: expected a scalar value"
%
(
name
,))
if
not
val
.
type
.
dtype
==
'float32'
:
raise
TypeError
(
"
%
s: type is not float32"
%
(
name
,))
return
val
class
Gemm16
(
COp
):
"""
Gemm for float16 using the nervena kernels.
"""
__props__
=
(
'relu'
,
'inplace'
)
_f16_ok
=
True
params_type
=
gpu_context_type
KERN_NAMES
=
(
'nn_128x128'
,
'nn_128x64'
,
'nn_128x32'
,
'nn_vec_128x128'
,
'nn_vec_128x64'
,
'nn_vec_128x32'
,
'tn_128x128'
,
'tn_128x64'
,
'tn_128x32'
,
'tn_vec_128x128'
,
'tn_vec_128x64'
,
'tn_vec_128x32'
,
'tn_vec_128x16'
,
'nt_128x128'
,
'nt_vec_128x128'
)
def
__init__
(
self
,
relu
=
False
,
inplace
=
False
):
COp
.
__init__
(
self
,
[
"gemm16.c"
],
"gemm16"
)
self
.
relu
=
relu
# relu = True will require more work in optimizations.
assert
self
.
relu
is
False
self
.
inplace
=
inplace
if
self
.
inplace
:
self
.
destroy_map
=
{
0
:
[
0
]}
def
make_node
(
self
,
C
,
alpha
,
A
,
B
,
beta
):
if
GPUTensor
is
None
:
raise
RuntimeError
(
"Can't use Gemm16: nervanagpu not found"
)
ctx_name
=
infer_context_name
(
C
,
A
,
B
)
A
=
as_gpuarray_variable
(
A
,
ctx_name
)
B
=
as_gpuarray_variable
(
B
,
ctx_name
)
C
=
as_gpuarray_variable
(
C
,
ctx_name
)
alpha
=
ensure_float
(
alpha
,
'alpha'
)
beta
=
ensure_float
(
beta
,
'beta'
)
assert
C
.
dtype
==
A
.
dtype
==
B
.
dtype
==
'float16'
return
Apply
(
self
,
[
C
,
alpha
,
A
,
B
,
beta
],
[
C
.
type
()])
def
get_params
(
self
,
node
):
return
node
.
inputs
[
0
]
.
type
.
context
def
c_headers
(
self
):
return
[
'gpuarray/types.h'
,
'numpy_compat.h'
,
'gpuarray_helper.h'
,
'string.h'
]
def
c_header_dirs
(
self
):
return
[
os
.
path
.
dirname
(
__file__
)]
def
get_op_params
(
self
):
return
[(
'GEMM16_INPLACE'
,
'1'
if
self
.
inplace
else
'0'
)]
@staticmethod
def
cubin_to_code
(
name
):
fname
=
'hgemm_{0}.cubin'
.
format
(
name
)
with
open
(
os
.
path
.
join
(
nerv
.
cubin_path
,
fname
))
as
f
:
cubin
=
f
.
read
()
bcode
=
','
.
join
(
hex
(
ord
(
c
))
for
c
in
cubin
)
return
"static const char bin_
%
s[] = {
%
s };"
%
(
name
,
bcode
)
@staticmethod
def
init_gpukernel
(
name
,
fail
):
return
"""
bcode = bin_
%(name)
s;
sz = sizeof(bin_
%(name)
s);
if (GpuKernel_init(&k_
%(name)
s, c->ctx, 1, &bcode, &sz,
"hgemm_
%(name)
s", 13, types, GA_USE_BINARY, NULL)
!= GA_NO_ERROR) {
PyErr_SetString(PyExc_RuntimeError, "Could not initialize kernel
%(name)
s");
%(fail)
s;
}
"""
%
dict
(
name
=
name
,
fail
=
fail
)
def
c_support_code
(
self
):
codel
=
[]
for
name
in
self
.
KERN_NAMES
:
codel
.
append
(
Gemm16
.
cubin_to_code
(
name
))
return
'
\n
'
.
join
(
codel
)
def
c_support_code_struct
(
self
,
node
,
nodename
):
codel
=
[]
for
name
in
self
.
KERN_NAMES
:
codel
.
append
(
"GpuKernel k_{0};"
.
format
(
name
))
codel
.
append
(
super
(
Gemm16
,
self
)
.
c_support_code_struct
(
node
,
nodename
))
return
'
\n
'
.
join
(
codel
)
def
c_init_code_struct
(
self
,
node
,
nodename
,
sub
):
codel
=
[
super
(
Gemm16
,
self
)
.
c_init_code_struct
(
node
,
nodename
,
sub
)]
for
name
in
self
.
KERN_NAMES
:
codel
.
append
(
"memset(&k_{0}, 0, sizeof(GpuKernel));"
.
format
(
name
))
codel
.
append
(
"const char *bcode;"
)
codel
.
append
(
"size_t sz;"
)
codel
.
append
(
"PyGpuContextObject *c =
%
s;"
%
(
sub
[
'params'
],))
codel
.
append
(
"int types[13] = {GA_BUFFER, GA_BUFFER, GA_BUFFER, "
"GA_BUFFER, GA_INT, GA_INT, GA_INT, GA_INT, GA_INT, "
"GA_INT, GA_FLOAT, GA_FLOAT, GA_INT};"
)
for
name
in
self
.
KERN_NAMES
:
codel
.
append
(
self
.
init_gpukernel
(
name
,
sub
[
'fail'
]))
return
'
\n
'
.
join
(
codel
)
def
c_cleanup_code_struct
(
self
,
node
,
nodename
):
codel
=
[]
for
name
in
self
.
KERN_NAMES
:
codel
.
append
(
"GpuKernel_clear(&k_{0});"
.
format
(
name
))
return
'
\n
'
.
join
(
codel
)
@opt.register_opt
(
'fast_compile'
)
@opt.op_lifter
([
tensor
.
Dot
])
@opt.register_opt2
([
tensor
.
Dot
],
'fast_compile'
)
def
local_gpua_dot_to_gemm16
(
op
,
ctx_name
,
inputs
,
outputs
):
if
nerv
is
None
:
return
A
=
inputs
[
0
]
B
=
inputs
[
1
]
if
(
A
.
ndim
==
2
and
B
.
ndim
==
2
and
A
.
dtype
==
'float16'
and
B
.
dtype
==
'float16'
):
fgraph
=
getattr
(
outputs
[
0
],
'fgraph'
,
None
)
C
=
GpuAllocEmpty
(
'float16'
,
ctx_name
)(
shape_i
(
A
,
0
,
fgraph
),
shape_i
(
B
,
1
,
fgraph
))
return
Gemm16
()(
C
,
1.0
,
A
,
B
,
0.0
)
@opt.register_opt
()
@alpha_merge
(
Gemm16
,
alpha_in
=
1
,
beta_in
=
4
)
def
local_gemm16_alpha_merge
(
node
,
*
inputs
):
return
[
Gemm16
(
relu
=
node
.
op
.
relu
)(
*
inputs
)]
@opt.register_opt
()
@output_merge
(
Gemm16
,
alpha_in
=
1
,
beta_in
=
4
,
out_in
=
0
)
def
local_gemm16_output_merge
(
node
,
*
inputs
):
return
[
Gemm16
(
relu
=
node
.
op
.
relu
)(
*
inputs
)]
@local_optimizer
([
Gemm16
],
inplace
=
True
)
def
local_gemm16_inplace
(
node
):
if
type
(
node
.
op
)
!=
Gemm16
or
node
.
op
.
inplace
:
return
inputs
=
list
(
node
.
inputs
)
C
=
inputs
[
0
]
if
(
C
.
owner
and
isinstance
(
C
.
owner
.
op
,
GpuAllocEmpty
)
and
len
(
C
.
clients
)
>
1
):
inputs
[
0
]
=
C
.
owner
.
op
(
*
C
.
owner
.
inputs
)
return
[
Gemm16
(
relu
=
node
.
op
.
relu
,
inplace
=
True
)(
*
inputs
)]
optdb
.
register
(
'local_gemm16_inplace'
,
tensor
.
opt
.
in2out
(
local_gemm16_inplace
,
name
=
'local_gemm16_inplace'
),
70.0
,
'fast_run'
,
'inplace'
,
'gpuarray'
)
theano/gpuarray/tests/test_nerv.py
deleted
100644 → 0
浏览文件 @
13ff40a3
from
__future__
import
absolute_import
,
print_function
,
division
from
nose.plugins.skip
import
SkipTest
import
numpy
as
np
from
theano
import
function
from
theano.tests
import
unittest_tools
as
utt
from
theano.tensor
import
vector
,
matrix
,
dot
from
.config
import
mode_with_gpu
from
..nerv
import
Gemm16
,
nerv
def
test_gemm16_swap
():
if
nerv
is
None
:
raise
SkipTest
(
"nervanagpu not available"
)
v
=
vector
(
dtype
=
'float16'
)
m
=
matrix
(
dtype
=
'float16'
)
m2
=
matrix
(
dtype
=
'float16'
)
m32
=
matrix
(
dtype
=
'float32'
)
# test that we don't try to replace anything but matrix x matrix in float16
f
=
function
([
v
,
m
],
dot
(
v
,
m
),
mode
=
mode_with_gpu
)
assert
len
([
node
for
node
in
f
.
maker
.
fgraph
.
apply_nodes
if
isinstance
(
node
.
op
,
Gemm16
)])
==
0
f
=
function
([
m32
,
m
],
dot
(
m32
,
m
),
mode
=
mode_with_gpu
)
assert
len
([
node
for
node
in
f
.
maker
.
fgraph
.
apply_nodes
if
isinstance
(
node
.
op
,
Gemm16
)])
==
0
f
=
function
([
m
,
m2
],
dot
(
m
,
m2
),
mode
=
mode_with_gpu
)
assert
len
([
node
for
node
in
f
.
maker
.
fgraph
.
apply_nodes
if
isinstance
(
node
.
op
,
Gemm16
)])
==
1
def
test_gemm16_value
():
if
nerv
is
None
:
raise
SkipTest
(
"nervanagpu not available"
)
m
=
matrix
(
dtype
=
'float16'
)
m2
=
matrix
(
dtype
=
'float16'
)
f
=
function
([
m
,
m2
],
dot
(
m
,
m2
),
mode
=
mode_with_gpu
)
v1
=
np
.
random
.
random
((
3
,
4
))
.
astype
(
'float16'
)
v2
=
np
.
random
.
random
((
4
,
2
))
.
astype
(
'float16'
)
of
=
f
(
v1
,
v2
)
on
=
np
.
dot
(
v1
,
v2
)
utt
.
assert_allclose
(
of
,
on
)
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