replaced lgcm with pylearn.org, closes #257

doc/glossary.txt

@@ -47,6 +47,9 @@ Glossary of terminology
     constant
         WRITEME
 
+    dynamic
+        WRITEME
+
     elementwise
         An elementwise operation ``f`` on two matrices ``M`` and ``N``
         is one such that:
@@ -84,6 +87,9 @@ Glossary of terminology
     pure
         WRITEME
 
+    static
+        WRITEME
+
     type
         WRITEME
 
@@ -208,11 +214,11 @@ Glossary of terminology
         compilation stage
 
         :term:`Env`, in particular `replace()
-        <http://lgcm.iro.umontreal.ca/epydoc/theano.gof.env.Env-class.html#replace
+        <http://pylearn.org/epydoc/theano.gof.env.Env-class.html#replace
         replace()>`_
 
         See also `Optimizer
-        <http://lgcm.iro.umontreal.ca/epydoc/theano.gof.opt.Optimizer-class.html>`_,
+        <http://pylearn.org/epydoc/theano.gof.opt.Optimizer-class.html>`_,
         which is the base interface for writing transformers, such as
         :term:`optimizations <Optimization>` and :term:`stabilizations
         <Stabilization>`.
@@ -236,12 +242,12 @@ Glossary of terminology
         a type of operation. Instance is TOI
 
         :term:`Op` is an abstract class (`Op API
-        <http://lgcm.iro.umontreal.ca/epydoc/theano.gof.op.Op-class.html>`_)
+        <http://pylearn.org/epydoc/theano.gof.op.Op-class.html>`_)
         that documents the interface for theano's data
         transformations.  It has many subclasses, such as `sparse Dot
-        <http://lgcm.iro.umontreal.ca/epydoc/theano.sparse.Dot-class.html>`_.
+        <http://pylearn.org/epydoc/theano.sparse.Dot-class.html>`_.
         and `Shape
-        <http://lgcm.iro.umontreal.ca/epydoc/theano.tensor.Shape-class.html>`_.
+        <http://pylearn.org/epydoc/theano.tensor.Shape-class.html>`_.
 
 
         Comparing with the Python language, :term:`Op` is theano's
@@ -270,7 +276,7 @@ Glossary of terminology
         a Type-related graph node (a variable)
         
         A Variable
-        (`Variable API <http://lgcm.iro.umontreal.ca/epydoc/theano.gof.graph.Variable-class.html>`_)
+        (`Variable API <http://pylearn.org/epydoc/theano.gof.graph.Variable-class.html>`_)
         is theano's variable.  It symbolically represents a value (which
         can be a number, vector, matrix, tensor, etc.).
         The inputs and outputs of every :term:`Op` are Variable instances.
@@ -351,7 +357,7 @@ Glossary of terminology
     Tensor
         Type for vectors, matrices, etc.
         
-        Tensor (`Tensor API <http://lgcm.iro.umontreal.ca/epydoc/theano.tensor.Tensor-class.html doc>`_) is a class
+        Tensor (`Tensor API <http://pylearn.org/epydoc/theano.tensor.Tensor-class.html doc>`_) is a class
         that derives from :term:`Type`.  It is the symbolic type for ``numpy.ndarray``.
         The main properties that distinguish one Tensor instance from another are:
 
@@ -363,7 +369,7 @@ Glossary of terminology
         
     TensorVariable
         :term:`Variables <Variable>` of type :term:`Tensor` are of class
-        TensorVariable (`TensorVariable API <http://lgcm.iro.umontreal.ca/epydoc/theano.tensor.TensorVariable-class.html>`_).
+        TensorVariable (`TensorVariable API <http://pylearn.org/epydoc/theano.tensor.TensorVariable-class.html>`_).
         ``TensorVariable`` adds operator overloading so that ``TensorVariable`` instances can be used
         in mathematical expressions.  When any input to an expression is a ``TensorVariable`` then the
         expression will evaluate to an ``TensorVariable`` and a :term:`graph` corresponding to
@@ -416,7 +422,7 @@ Glossary of terminology
     Type
         :term:`Variables <Variable>` are strongly typed by :term:`Type` instances
         
-        `theano.Type <http://lgcm.iro.umontreal.ca/epydoc/theano.gof.type.Type-class.html>`_
+        `theano.Type <http://pylearn.org/epydoc/theano.gof.type.Type-class.html>`_
         is an important abstract class in the creation and compilation of theano graphs.
         
         Type instances are mainly responsible for two things: 
@@ -427,15 +433,15 @@ Glossary of terminology
         
         Theano comes with several subclasses of ``theano.type`` such as:
 
-         * Generic (`Generic API <http://lgcm.iro.umontreal.ca/epydoc/theano.gof.type.Generic-class.html>`_) - for any python type
+         * Generic (`Generic API <http://pylearn.org/epydoc/theano.gof.type.Generic-class.html>`_) - for any python type
          * :term:`Tensor` - for numpy.ndarray
-         * Sparse (`Sparse API <http://lgcm.iro.umontreal.ca/epydoc/theano.sparse.Sparse-class.html>`_) - for scipy.sparse
+         * Sparse (`Sparse API <http://pylearn.org/epydoc/theano.sparse.Sparse-class.html>`_) - for scipy.sparse
 
         You can create more type instances if you like (see :ref:`HowtoCreateType`).
         
         The C code interface methods of
         ``theano.Type`` are described in `docstrings
-        <http://lgcm.iro.umontreal.ca/epydoc/theano.gof.type.Type-class.html>`_,
+        <http://pylearn.org/epydoc/theano.gof.type.Type-class.html>`_,
         see :ref:`CodeGeneration` for a more general intro to how C code is generated.
 
         See also :term:`Theano type instance (TTI) <TTI>`.
@@ -444,7 +450,7 @@ Glossary of terminology
         
 
     Value
-        :term:`Value` (`Value API <http://lgcm.iro.umontreal.ca/epydoc/theano.gof.graph.Value-class.html doc>`_)
+        :term:`Value` (`Value API <http://pylearn.org/epydoc/theano.gof.graph.Value-class.html doc>`_)
         and :term:`Constant` are subclasses of
         :term:`Variable`, which means they serve more or less the
         same purpose. There is however one important difference:

doc/index.txt

@@ -74,7 +74,7 @@ Hacking Theano
 - Send us your work as a patch to `theano-dev`_ or commit directly to the trunk.
 
 .. _theano-dev: http://groups.google.com/group/theano-dev?pli=1
-.. _task list: http://lgcm.iro.umontreal.ca/theano/query?status=accepted&status=assigned&status=new&status=reopened&group=milestone&max=200&col=id&col=summary&col=status&col=owner&col=type&col=priority&col=component&col=time&report=9&order=priority
+.. _task list: http://pylearn.org/theano/query?status=accepted&status=assigned&status=new&status=reopened&group=milestone&max=200&col=id&col=summary&col=status&col=owner&col=type&col=priority&col=component&col=time&report=9&order=priority
 .. _reStructuredText: http://docutils.sourceforge.net/rst.html
 
 

doc/internal/dev_start_guide.txt

@@ -64,10 +64,10 @@ I advise to never import theano's files from outside theano itself (and I think
 When you install a package, only the package name can be imported directly. If you want a sub-package, you must import it from the main package. That's how it will work in 99.9% of installs because it is the default. Therefore, if you stray from this practice, your code will not be portable. Also, some ways to circumvent circular dependencies might make it so you have to import files in a certain order, which is best handled by the package's own __init__.py. 
 
 
-.. _non-basic python: http://lgcm.iro.umontreal.ca/theano/wiki/NonbasicPython
+.. _non-basic python: http://pylearn.org/theano/wiki/NonbasicPython
 .. _reStructuredText: http://docutils.sourceforge.net/rst.html
 .. _epydoc: http://epydoc.sourceforge.net/
-.. _basicnumpy: http://lgcm.iro.umontreal.ca/theano/wiki/BasicNumpy
+.. _basicnumpy: http://pylearn.org/theano/wiki/BasicNumpy
 
 
 .. _README: ../README.html
@@ -75,6 +75,6 @@ When you install a package, only the package name can be imported directly. If y
 .. _Documentation: index.html
 .. _Wiki: http://pylearn.org/theano
 .. _TRAC: http://trac.edgewall.org/
-.. _task list: http://lgcm.iro.umontreal.ca/theano/query?status=accepted&status=assigned&status=new&status=reopened&group=milestone&max=200&col=id&col=summary&col=status&col=owner&col=type&col=priority&col=component&col=time&report=9&order=priority
+.. _task list: http://pylearn.org/theano/query?status=accepted&status=assigned&status=new&status=reopened&group=milestone&max=200&col=id&col=summary&col=status&col=owner&col=type&col=priority&col=component&col=time&report=9&order=priority
 
 

doc/internal/metadocumentation.txt

@@ -75,7 +75,7 @@ How documentation is auto-built on push
 
 When you push to the main repository, the following file is run::
 
-   projects@lgcm:~/repos/theano/.hg/refresh-epydoc.sh
+   projects@pylearn.org:~/repos/theano/.hg/refresh-epydoc.sh
 
 It calls ``epydoc`` and ``sphinx`` on the code.
 

doc/introduction.txt

@@ -167,6 +167,6 @@ mailing list.
 
 .. _theano-users: http://groups.google.com/group/theano-users?pli=1
 .. _theano-dev: http://groups.google.com/group/theano-dev?pli=1
-.. _task list: http://lgcm.iro.umontreal.ca/theano/query?status=accepted&status=assigned&status=new&status=reopened&group=milestone&max=200&col=id&col=summary&col=status&col=owner&col=type&col=priority&col=component&col=time&report=9&order=priority
+.. _task list: http://pylearn.org/theano/query?status=accepted&status=assigned&status=new&status=reopened&group=milestone&max=200&col=id&col=summary&col=status&col=owner&col=type&col=priority&col=component&col=time&report=9&order=priority