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testgroup
pytensor
Commits
5301d18d
提交
5301d18d
authored
5月 05, 2008
作者:
James Bergstra
浏览文件
操作
浏览文件
下载
差异文件
merged
上级
53885a80
c7351f2d
全部展开
隐藏空白字符变更
内嵌
并排
正在显示
5 个修改的文件
包含
166 行增加
和
30 行删除
+166
-30
_test_compile.py
_test_compile.py
+5
-2
_test_graph.py
gof/_test_graph.py
+130
-22
graph.py
gof/graph.py
+0
-0
op.py
gof/op.py
+5
-6
utils.py
gof/utils.py
+26
-0
没有找到文件。
_test_compile.py
浏览文件 @
5301d18d
...
@@ -124,9 +124,12 @@ class T_Function(unittest.TestCase):
...
@@ -124,9 +124,12 @@ class T_Function(unittest.TestCase):
def
test_orphans
(
self
):
def
test_orphans
(
self
):
gi
,
go
=
graph1
()
gi
,
go
=
graph1
()
opt
=
None
opt
=
None
p0
=
Function
(
gi
[
0
:
0
],
go
)
p0
=
Function
(
gi
[
0
:
0
],
go
,
keep_locals
=
True
)
self
.
failUnless
(
p0
()
==
1.0
)
self
.
failUnless
(
p0
.
orphans
==
go
,
p0
.
orphans
)
vp0
=
p0
()
self
.
failUnless
(
vp0
==
1.0
,
vp0
)
p3
=
Function
(
gi
,
go
)
p3
=
Function
(
gi
,
go
)
p2
=
Function
(
gi
[
0
:
2
],
go
)
p2
=
Function
(
gi
[
0
:
2
],
go
)
...
...
gof/_test_graph.py
浏览文件 @
5301d18d
from
collections
import
deque
import
unittest
import
unittest
from
graph
import
*
from
graph
import
*
from
op
import
Op
from
op
import
Op
from
result
import
Result
from
result
import
Result
def
inputs
(
result_list
):
"""
@type result_list: list of L{Result}
@param result_list: output L{Result}s (from which to search backward through owners)
@returns: the list of L{Result}s with no owner, in the order found by a
left-recursive depth-first search started at the L{Result}s in result_list.
"""
def
expand
(
r
):
if
r
.
owner
:
l
=
list
(
r
.
owner
.
inputs
)
l
.
reverse
()
return
l
dfs_results
=
stack_search
(
deque
(
result_list
),
expand
,
'dfs'
)
rval
=
[
r
for
r
in
dfs_results
if
r
.
owner
is
None
]
#print rval, _orig_inputs(o)
return
rval
if
1
:
testcase
=
unittest
.
TestCase
else
:
testcase
=
object
realtestcase
=
unittest
.
TestCase
class
MyResult
(
Result
):
class
MyResult
(
Result
):
...
@@ -21,10 +45,10 @@ class MyResult(Result):
...
@@ -21,10 +45,10 @@ class MyResult(Result):
return
isinstance
(
other
,
MyResult
)
and
other
.
thingy
==
self
.
thingy
return
isinstance
(
other
,
MyResult
)
and
other
.
thingy
==
self
.
thingy
def
__str__
(
self
):
def
__str__
(
self
):
return
str
(
self
.
thingy
)
return
'R
%
s'
%
str
(
self
.
thingy
)
def
__repr__
(
self
):
def
__repr__
(
self
):
return
str
(
self
.
thingy
)
return
'R
%
s'
%
str
(
self
.
thingy
)
class
MyOp
(
Op
):
class
MyOp
(
Op
):
...
@@ -37,18 +61,19 @@ class MyOp(Op):
...
@@ -37,18 +61,19 @@ class MyOp(Op):
self
.
outputs
=
[
MyResult
(
sum
([
input
.
thingy
for
input
in
inputs
]))]
self
.
outputs
=
[
MyResult
(
sum
([
input
.
thingy
for
input
in
inputs
]))]
class
_test_inputs
(
unittest
.
TestC
ase
):
class
_test_inputs
(
testc
ase
):
def
test_straightforward
(
self
):
def
test_straightforward
(
self
):
r1
,
r2
=
MyResult
(
1
),
MyResult
(
2
)
r1
,
r2
=
MyResult
(
1
),
MyResult
(
2
)
op
=
MyOp
(
r1
,
r2
)
op
=
MyOp
(
r1
,
r2
)
assert
inputs
(
op
.
outputs
)
==
set
([
r1
,
r2
])
assert
inputs
(
op
.
outputs
)
==
[
r1
,
r2
]
def
test_deep
(
self
):
def
test_deep
(
self
):
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
op
=
MyOp
(
r1
,
r2
)
op
=
MyOp
(
r1
,
r2
)
op2
=
MyOp
(
op
.
outputs
[
0
],
r5
)
op2
=
MyOp
(
op
.
outputs
[
0
],
r5
)
assert
inputs
(
op2
.
outputs
)
==
set
([
r1
,
r2
,
r5
])
i
=
inputs
(
op2
.
outputs
)
self
.
failUnless
(
i
==
[
r1
,
r2
,
r5
],
i
)
def
test_unreached_inputs
(
self
):
def
test_unreached_inputs
(
self
):
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
...
@@ -57,23 +82,26 @@ class _test_inputs(unittest.TestCase):
...
@@ -57,23 +82,26 @@ class _test_inputs(unittest.TestCase):
try
:
try
:
# function doesn't raise if we put False instead of True
# function doesn't raise if we put False instead of True
ro
=
results_and_orphans
([
r1
,
r2
,
op2
.
outputs
[
0
]],
op
.
outputs
,
True
)
ro
=
results_and_orphans
([
r1
,
r2
,
op2
.
outputs
[
0
]],
op
.
outputs
,
True
)
self
.
fail
()
except
Exception
,
e
:
except
Exception
,
e
:
if
e
[
0
]
is
results_and_orphans
.
E_unreached
:
if
e
[
0
]
is
results_and_orphans
.
E_unreached
:
return
return
raise
self
.
fail
()
def
test_uz
(
self
):
pass
class
_test_orphans
(
unittest
.
TestCase
):
class
_test_orphans
(
testcase
):
def
test_straightforward
(
self
):
def
test_straightforward
(
self
):
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
op
=
MyOp
(
r1
,
r2
)
op
=
MyOp
(
r1
,
r2
)
op2
=
MyOp
(
op
.
outputs
[
0
],
r5
)
op2
=
MyOp
(
op
.
outputs
[
0
],
r5
)
assert
orphans
([
r1
,
r2
],
op2
.
outputs
)
==
set
([
r5
])
orph
=
orphans
([
r1
,
r2
],
op2
.
outputs
)
self
.
failUnless
(
orph
==
[
r5
],
orph
)
class
_test_as_string
(
unittest
.
TestC
ase
):
class
_test_as_string
(
testc
ase
):
leaf_formatter
=
str
leaf_formatter
=
str
node_formatter
=
lambda
op
,
argstrings
:
"
%
s(
%
s)"
%
(
op
.
__class__
.
__name__
,
node_formatter
=
lambda
op
,
argstrings
:
"
%
s(
%
s)"
%
(
op
.
__class__
.
__name__
,
...
@@ -82,35 +110,37 @@ class _test_as_string(unittest.TestCase):
...
@@ -82,35 +110,37 @@ class _test_as_string(unittest.TestCase):
def
test_straightforward
(
self
):
def
test_straightforward
(
self
):
r1
,
r2
=
MyResult
(
1
),
MyResult
(
2
)
r1
,
r2
=
MyResult
(
1
),
MyResult
(
2
)
op
=
MyOp
(
r1
,
r2
)
op
=
MyOp
(
r1
,
r2
)
assert
as_string
([
r1
,
r2
],
op
.
outputs
)
==
[
"MyOp(1, 2)"
]
s
=
as_string
([
r1
,
r2
],
op
.
outputs
)
self
.
failUnless
(
s
==
[
"MyOp(R1, R2)"
],
s
)
def
test_deep
(
self
):
def
test_deep
(
self
):
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
op
=
MyOp
(
r1
,
r2
)
op
=
MyOp
(
r1
,
r2
)
op2
=
MyOp
(
op
.
outputs
[
0
],
r5
)
op2
=
MyOp
(
op
.
outputs
[
0
],
r5
)
assert
as_string
([
r1
,
r2
,
r5
],
op2
.
outputs
)
==
[
"MyOp(MyOp(1, 2), 5)"
]
s
=
as_string
([
r1
,
r2
,
r5
],
op2
.
outputs
)
self
.
failUnless
(
s
==
[
"MyOp(MyOp(R1, R2), R5)"
],
s
)
def
test_multiple_references
(
self
):
def
test_multiple_references
(
self
):
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
op
=
MyOp
(
r1
,
r2
)
op
=
MyOp
(
r1
,
r2
)
op2
=
MyOp
(
op
.
outputs
[
0
],
op
.
outputs
[
0
])
op2
=
MyOp
(
op
.
outputs
[
0
],
op
.
outputs
[
0
])
assert
as_string
([
r1
,
r2
,
r5
],
op2
.
outputs
)
==
[
"MyOp(*1 -> MyOp(
1,
2), *1)"
]
assert
as_string
([
r1
,
r2
,
r5
],
op2
.
outputs
)
==
[
"MyOp(*1 -> MyOp(
R1, R
2), *1)"
]
def
test_cutoff
(
self
):
def
test_cutoff
(
self
):
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
op
=
MyOp
(
r1
,
r2
)
op
=
MyOp
(
r1
,
r2
)
op2
=
MyOp
(
op
.
outputs
[
0
],
op
.
outputs
[
0
])
op2
=
MyOp
(
op
.
outputs
[
0
],
op
.
outputs
[
0
])
assert
as_string
(
op
.
outputs
,
op2
.
outputs
)
==
[
"MyOp(
3,
3)"
]
assert
as_string
(
op
.
outputs
,
op2
.
outputs
)
==
[
"MyOp(
R3, R
3)"
]
assert
as_string
(
op2
.
inputs
,
op2
.
outputs
)
==
[
"MyOp(
3,
3)"
]
assert
as_string
(
op2
.
inputs
,
op2
.
outputs
)
==
[
"MyOp(
R3, R
3)"
]
class
_test_clone
(
unittest
.
TestC
ase
):
class
_test_clone
(
testc
ase
):
def
test_accurate
(
self
):
def
test_accurate
(
self
):
r1
,
r2
=
MyResult
(
1
),
MyResult
(
2
)
r1
,
r2
=
MyResult
(
1
),
MyResult
(
2
)
op
=
MyOp
(
r1
,
r2
)
op
=
MyOp
(
r1
,
r2
)
new
=
clone
([
r1
,
r2
],
op
.
outputs
)
new
=
clone
([
r1
,
r2
],
op
.
outputs
)
assert
as_string
([
r1
,
r2
],
new
)
==
[
"MyOp(
1,
2)"
]
assert
as_string
([
r1
,
r2
],
new
)
==
[
"MyOp(
R1, R
2)"
]
def
test_copy
(
self
):
def
test_copy
(
self
):
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
...
@@ -130,13 +160,91 @@ class _test_clone(unittest.TestCase):
...
@@ -130,13 +160,91 @@ class _test_clone(unittest.TestCase):
new_op
=
new
[
0
]
.
owner
new_op
=
new
[
0
]
.
owner
new_op
.
inputs
=
MyResult
(
7
),
MyResult
(
8
)
new_op
.
inputs
=
MyResult
(
7
),
MyResult
(
8
)
assert
as_string
(
inputs
(
new_op
.
outputs
),
new_op
.
outputs
)
==
[
"MyOp(7, 8)"
]
s
=
as_string
(
inputs
(
new_op
.
outputs
),
new_op
.
outputs
)
assert
as_string
(
inputs
(
op
.
outputs
),
op
.
outputs
)
==
[
"MyOp(MyOp(1, 2), 5)"
]
self
.
failUnless
(
s
==
[
"MyOp(R7, R8)"
],
s
)
assert
as_string
(
inputs
(
op
.
outputs
),
op
.
outputs
)
==
[
"MyOp(MyOp(R1, R2), R5)"
]
def
prenode
(
obj
):
if
isinstance
(
obj
,
Result
):
if
obj
.
owner
:
return
[
obj
.
owner
]
if
isinstance
(
obj
,
Op
):
return
obj
.
inputs
class
_test_toposort
(
testcase
):
def
test0
(
self
):
"""Test a simple graph"""
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
o
=
MyOp
(
r1
,
r2
)
o2
=
MyOp
(
o
.
outputs
[
0
],
r5
)
if
__name__
==
'__main__'
:
all
=
general_toposort
(
o2
.
outputs
,
prenode
)
unittest
.
main
()
self
.
failUnless
(
all
==
[
r5
,
r2
,
r1
,
o
,
o
.
outputs
[
0
],
o2
,
o2
.
outputs
[
0
]],
all
)
all
=
io_toposort
([
r5
],
o2
.
outputs
)
self
.
failUnless
(
all
==
[
o
,
o2
],
all
)
def
test1
(
self
):
"""Test a graph with double dependencies"""
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
o
=
MyOp
(
r1
,
r1
)
o2
=
MyOp
(
o
.
outputs
[
0
],
r5
)
all
=
general_toposort
(
o2
.
outputs
,
prenode
)
self
.
failUnless
(
all
==
[
r5
,
r1
,
o
,
o
.
outputs
[
0
],
o2
,
o2
.
outputs
[
0
]],
all
)
def
test2
(
self
):
"""Test a graph where the inputs have owners"""
r1
,
r2
,
r5
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
5
)
o
=
MyOp
(
r1
,
r1
)
r2b
=
o
.
outputs
[
0
]
o2
=
MyOp
(
r2b
,
r2b
)
all
=
io_toposort
([
r2b
],
o2
.
outputs
)
self
.
failUnless
(
all
==
[
o2
],
all
)
o2
=
MyOp
(
r2b
,
r5
)
all
=
io_toposort
([
r2b
],
o2
.
outputs
)
self
.
failUnless
(
all
==
[
o2
],
all
)
def
test3
(
self
):
"""Test a graph which is not connected"""
r1
,
r2
,
r3
,
r4
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
3
),
MyResult
(
4
)
o0
=
MyOp
(
r1
,
r2
)
o1
=
MyOp
(
r3
,
r4
)
all
=
io_toposort
([
r1
,
r2
,
r3
,
r4
],
o0
.
outputs
+
o1
.
outputs
)
self
.
failUnless
(
all
==
[
o1
,
o0
],
all
)
def
test4
(
self
):
"""Test inputs and outputs mixed together in a chain graph"""
r1
,
r2
,
r3
,
r4
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
3
),
MyResult
(
4
)
o0
=
MyOp
(
r1
,
r2
)
o1
=
MyOp
(
o0
.
outputs
[
0
],
r1
)
all
=
io_toposort
([
r1
,
o0
.
outputs
[
0
]],
[
o0
.
outputs
[
0
],
o1
.
outputs
[
0
]])
self
.
failUnless
(
all
==
[
o1
],
all
)
def
test5
(
self
):
"""Test when outputs have clients"""
r1
,
r2
,
r3
,
r4
=
MyResult
(
1
),
MyResult
(
2
),
MyResult
(
3
),
MyResult
(
4
)
o0
=
MyOp
(
r1
,
r2
)
o1
=
MyOp
(
o0
.
outputs
[
0
],
r4
)
all
=
io_toposort
([],
o0
.
outputs
)
self
.
failUnless
(
all
==
[
o0
],
all
)
if
__name__
==
'__main__'
:
if
1
:
#run all tests
unittest
.
main
()
elif
1
:
#load some TestCase classes
suite
=
unittest
.
TestLoader
()
suite
=
suite
.
loadTestsFromTestCase
(
_test_toposort
)
#run just some of them
unittest
.
TextTestRunner
(
verbosity
=
2
)
.
run
(
suite
)
else
:
#run just a single test
_test_toposort
(
'test0'
)
.
debug
()
gof/graph.py
浏览文件 @
5301d18d
差异被折叠。
点击展开。
gof/op.py
浏览文件 @
5301d18d
...
@@ -6,7 +6,6 @@ compatible with gof's graph manipulation routines.
...
@@ -6,7 +6,6 @@ compatible with gof's graph manipulation routines.
import
utils
import
utils
from
utils
import
ClsInit
,
all_bases
,
all_bases_collect
,
AbstractFunctionError
from
utils
import
ClsInit
,
all_bases
,
all_bases_collect
,
AbstractFunctionError
import
graph
from
copy
import
copy
from
copy
import
copy
...
@@ -170,11 +169,11 @@ class Op(object):
...
@@ -170,11 +169,11 @@ class Op(object):
# String representation
# String representation
#
#
def
__str__
(
self
)
:
if
0
:
return
graph
.
op_as_string
(
self
.
inputs
,
self
)
def
__str__
(
self
):
return
graph
.
op_as_string
(
self
.
inputs
,
self
)
def
__repr__
(
self
):
def
__repr__
(
self
):
return
str
(
self
)
return
str
(
self
)
#
#
...
...
gof/utils.py
浏览文件 @
5301d18d
...
@@ -19,6 +19,31 @@ class AbstractFunctionError(Exception):
...
@@ -19,6 +19,31 @@ class AbstractFunctionError(Exception):
function has been left out of an implementation class.
function has been left out of an implementation class.
"""
"""
def
deprecated
(
filename
,
msg
=
''
):
"""Decorator which will print a warning message on the first call.
Use it like this:
@deprecated('myfile', 'do something different...')
def fn_name(...)
...
And it will print
WARNING myfile.fn_name deprecated. do something different...
"""
def
_deprecated
(
f
):
printme
=
[
True
]
def
g
(
*
args
,
**
kwargs
):
if
printme
[
0
]:
print
'WARNING:
%
s.
%
s deprecated.
%
s'
\
%
(
filename
,
f
.
__name__
,
msg
)
printme
[
0
]
=
False
return
f
(
*
args
,
**
kwargs
)
return
g
return
_deprecated
def
uniq
(
seq
):
def
uniq
(
seq
):
#TODO: consider building a set out of seq so that the if condition is constant time -JB
#TODO: consider building a set out of seq so that the if condition is constant time -JB
return
[
x
for
i
,
x
in
enumerate
(
seq
)
if
seq
.
index
(
x
)
==
i
]
return
[
x
for
i
,
x
in
enumerate
(
seq
)
if
seq
.
index
(
x
)
==
i
]
...
@@ -36,6 +61,7 @@ def difference(seq1, seq2):
...
@@ -36,6 +61,7 @@ def difference(seq1, seq2):
# -> use O(len(seq1) * len(seq2)) algo
# -> use O(len(seq1) * len(seq2)) algo
return
[
x
for
x
in
seq1
if
x
not
in
seq2
]
return
[
x
for
x
in
seq1
if
x
not
in
seq2
]
def
partition
(
f
,
seq
):
def
partition
(
f
,
seq
):
seqt
=
[]
seqt
=
[]
seqf
=
[]
seqf
=
[]
...
...
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