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testgroup
pytensor
Commits
458a5ccd
提交
458a5ccd
authored
4月 22, 2016
作者:
Christos Tsirigotis
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Add `side` of searchsorted as dynamic param
- Fix tests and grad - Add more documentation - Fix doc Raises ValueError in `as_tensor_variable` - Remove 'DebugMode' from tests
上级
02835cce
隐藏空白字符变更
内嵌
并排
正在显示
3 个修改的文件
包含
66 行增加
和
74 行删除
+66
-74
basic.py
theano/tensor/basic.py
+3
-5
extra_ops.py
theano/tensor/extra_ops.py
+57
-23
test_extra_ops.py
theano/tensor/tests/test_extra_ops.py
+6
-46
没有找到文件。
theano/tensor/basic.py
浏览文件 @
458a5ccd
...
@@ -138,17 +138,15 @@ def as_tensor_variable(x, name=None, ndim=None):
...
@@ -138,17 +138,15 @@ def as_tensor_variable(x, name=None, ndim=None):
If a new `Variable` instance is created, it will be named with this
If a new `Variable` instance is created, it will be named with this
string.
string.
ndim : None or integer
ndim : None or integer
Return a Variable with this many dimensions. Raise TypeError if it's
Return a Variable with this many dimensions.
not possible.
Raises
Raises
------
------
ValueError
ValueError
If an `Apply` with more than one output is fetched.
If an `Apply` with more than one output is fetched or
if `x` cannot be made into a Variable with `ndim` dimensions.
AsTensorError
AsTensorError
If `x` cannot be converted to a TensorType Variable.
If `x` cannot be converted to a TensorType Variable.
TypeError
If `x` cannot be made into a Variable with `ndim` dimensions.
"""
"""
if
hasattr
(
x
,
'_as_TensorVariable'
):
if
hasattr
(
x
,
'_as_TensorVariable'
):
...
...
theano/tensor/extra_ops.py
浏览文件 @
458a5ccd
...
@@ -8,7 +8,9 @@ import theano
...
@@ -8,7 +8,9 @@ import theano
from
theano.tensor
import
basic
from
theano.tensor
import
basic
from
theano.tensor
import
nlinalg
# noqa
from
theano.tensor
import
nlinalg
# noqa
from
theano
import
gof
,
scalar
from
theano
import
gof
,
scalar
from
theano.gradient
import
DisconnectedType
from
theano.gof
import
Generic
from
theano
import
gradient
from
theano.gradient
import
DisconnectedType
,
disconnected_type
tensor
=
basic
tensor
=
basic
...
@@ -79,11 +81,15 @@ class SearchsortedOp(theano.Op):
...
@@ -79,11 +81,15 @@ class SearchsortedOp(theano.Op):
"""
"""
params_type
=
Generic
()
__props__
=
(
"side"
,
)
__props__
=
(
"side"
,
)
def
__init__
(
self
,
side
=
'left'
):
def
__init__
(
self
,
side
=
'left'
):
self
.
side
=
side
self
.
side
=
side
def
get_params
(
self
,
node
):
return
self
.
side
def
make_node
(
self
,
x
,
v
,
sorter
=
None
):
def
make_node
(
self
,
x
,
v
,
sorter
=
None
):
x
=
basic
.
as_tensor
(
x
,
ndim
=
1
)
x
=
basic
.
as_tensor
(
x
,
ndim
=
1
)
v
=
basic
.
as_tensor
(
v
)
v
=
basic
.
as_tensor
(
v
)
...
@@ -100,7 +106,7 @@ class SearchsortedOp(theano.Op):
...
@@ -100,7 +106,7 @@ class SearchsortedOp(theano.Op):
def
infer_shape
(
self
,
node
,
shapes
):
def
infer_shape
(
self
,
node
,
shapes
):
return
[
shapes
[
1
]]
return
[
shapes
[
1
]]
def
perform
(
self
,
node
,
inputs
,
output_storage
):
def
perform
(
self
,
node
,
inputs
,
output_storage
,
params
):
x
=
inputs
[
0
]
x
=
inputs
[
0
]
v
=
inputs
[
1
]
v
=
inputs
[
1
]
if
len
(
node
.
inputs
)
==
3
:
if
len
(
node
.
inputs
)
==
3
:
...
@@ -109,7 +115,23 @@ class SearchsortedOp(theano.Op):
...
@@ -109,7 +115,23 @@ class SearchsortedOp(theano.Op):
sorter
=
None
sorter
=
None
z
=
output_storage
[
0
]
z
=
output_storage
[
0
]
z
[
0
]
=
np
.
searchsorted
(
x
,
v
,
side
=
self
.
side
,
sorter
=
sorter
)
z
[
0
]
=
np
.
searchsorted
(
x
,
v
,
side
=
params
,
sorter
=
sorter
)
def
c_support_code_struct
(
self
,
node
,
name
):
return
"""
int right_
%(name)
s;
"""
%
locals
()
def
c_init_code_struct
(
self
,
node
,
name
,
sub
):
side
=
sub
[
'params'
]
fail
=
sub
[
'fail'
]
return
"""
PyObject* tmp_
%(name)
s = PyUnicode_FromString("right");
if (tmp_
%(name)
s == NULL)
%(fail)
s;
right_
%(name)
s = PyUnicode_Compare(
%(side)
s, tmp_
%(name)
s);
Py_DECREF(tmp_
%(name)
s);
"""
%
locals
()
def
c_code
(
self
,
node
,
name
,
inames
,
onames
,
sub
):
def
c_code
(
self
,
node
,
name
,
inames
,
onames
,
sub
):
sorter
=
None
sorter
=
None
...
@@ -120,19 +142,18 @@ class SearchsortedOp(theano.Op):
...
@@ -120,19 +142,18 @@ class SearchsortedOp(theano.Op):
if
not
sorter
:
if
not
sorter
:
sorter
=
"NULL"
sorter
=
"NULL"
z
,
=
onames
z
,
=
onames
side
=
"NPY_SEARCHRIGHT"
if
self
.
side
==
'right'
else
"NPY_SEARCHLEFT"
fail
=
sub
[
'fail'
]
fail
=
sub
[
'fail'
]
return
"""
return
"""
Py_XDECREF(
%(z)
s);
Py_XDECREF(
%(z)
s);
%(z)
s = (PyArrayObject*) PyArray_SearchSorted(
%(x)
s, (PyObject*)
%(v)
s,
%(z)
s = (PyArrayObject*) PyArray_SearchSorted(
%(x)
s, (PyObject*)
%(v)
s,
%(side)
s
, (PyObject*)
%(sorter)
s);
right_
%(name)
s ? NPY_SEARCHLEFT : NPY_SEARCHRIGHT
, (PyObject*)
%(sorter)
s);
if (!
%(z)
s)
if (!
%(z)
s)
%(fail)
s;
%(fail)
s;
"""
%
locals
()
"""
%
locals
()
def
c_code_cache_version
(
self
):
def
c_code_cache_version
(
self
):
return
(
0
,
1
,
2
)
return
(
1
,
)
def
grad
(
self
,
inputs
,
output_gradients
):
def
grad
(
self
,
inputs
,
output_gradients
):
num_ins
=
len
(
inputs
)
num_ins
=
len
(
inputs
)
...
@@ -141,20 +162,10 @@ class SearchsortedOp(theano.Op):
...
@@ -141,20 +162,10 @@ class SearchsortedOp(theano.Op):
else
:
else
:
x
,
v
=
inputs
x
,
v
=
inputs
x_grad
=
x
.
zeros_like
()
x_grad
=
gradient
.
_float_zeros_like
(
x
)
if
v
.
ndim
==
1
:
v_grad
=
gradient
.
_float_zeros_like
(
v
)
v_grad
=
v
.
zeros_like
()
else
:
v_grad
=
theano
.
gradient
.
grad_not_implemented
(
self
,
1
,
v
,
"Grad is not implemented for inputs with "
"number of dimension other than 1."
)
if
num_ins
==
3
:
if
num_ins
==
3
:
sorter_grad
=
theano
.
gradient
.
grad_undefined
(
return
[
x_grad
,
v_grad
,
disconnected_type
()]
self
,
2
,
sorter
,
"searchsorted is not defined for non-integer sorter so "
"searchsorted(x, nb, sorter+eps), for eps > 0, "
"is undefined"
)
return
[
x_grad
,
v_grad
,
sorter_grad
]
else
:
else
:
return
[
x_grad
,
v_grad
]
return
[
x_grad
,
v_grad
]
...
@@ -162,7 +173,7 @@ class SearchsortedOp(theano.Op):
...
@@ -162,7 +173,7 @@ class SearchsortedOp(theano.Op):
def
searchsorted
(
x
,
v
,
side
=
'left'
,
sorter
=
None
):
def
searchsorted
(
x
,
v
,
side
=
'left'
,
sorter
=
None
):
"""Find indices where elements should be inserted to maintain order.
"""Find indices where elements should be inserted to maintain order.
Wraping of numpy.searchsorted. Find the indices into a sorted array
Wrap
p
ing of numpy.searchsorted. Find the indices into a sorted array
`x` such that, if the corresponding elements in `v` were inserted
`x` such that, if the corresponding elements in `v` were inserted
before the indices, the order of `x` would be preserved.
before the indices, the order of `x` would be preserved.
...
@@ -171,7 +182,7 @@ def searchsorted(x, v, side='left', sorter=None):
...
@@ -171,7 +182,7 @@ def searchsorted(x, v, side='left', sorter=None):
x: 1-D tensor (array-like)
x: 1-D tensor (array-like)
Input array. If `sorter` is None, then it must be sorted in
Input array. If `sorter` is None, then it must be sorted in
ascending order, otherwise `sorter` must be an array of indices
ascending order, otherwise `sorter` must be an array of indices
that sort
it.
which sorts
it.
v: tensor (array-like)
v: tensor (array-like)
Contains the values to be inserted into `x`.
Contains the values to be inserted into `x`.
side: {'left', 'right'}, optional.
side: {'left', 'right'}, optional.
...
@@ -183,13 +194,36 @@ def searchsorted(x, v, side='left', sorter=None):
...
@@ -183,13 +194,36 @@ def searchsorted(x, v, side='left', sorter=None):
Contains indices that sort array `x` into ascending order.
Contains indices that sort array `x` into ascending order.
They are typically the result of argsort.
They are typically the result of argsort.
.. versionadded:: 0.8.2
Returns
Returns
-------
-------
indices : tensor of integers (int64)
indices : tensor of integers (int64)
Array of insertion points with the same shape as `v`.
Array of insertion points with the same shape as `v`.
See Also
--------
`numpy.searchsorted <https://docs.scipy.org/doc/numpy-1.10.0/reference/generated/numpy.searchsorted.html>`_
Notes
-----
* Binary search is used to find the required insertion points.
* This Op is working **only on CPU** currently.
Examples
--------
>>> from theano import tensor
>>> x = tensor.dvector()
>>> idx = x.searchsorted(3)
>>> idx.eval({x: [1,2,3,4,5]})
array(2)
>>> tensor.extra_ops.searchsorted([1,2,3,4,5], 3).eval()
array(2)
>>> tensor.extra_ops.searchsorted([1,2,3,4,5], 3, side='right').eval()
array(3)
>>> tensor.extra_ops.searchsorted([1,2,3,4,5], [-10, 10, 2, 3]).eval()
array([0, 5, 1, 2])
.. versionadded:: 0.9
"""
"""
return
SearchsortedOp
(
side
=
side
)(
x
,
v
,
sorter
)
return
SearchsortedOp
(
side
=
side
)(
x
,
v
,
sorter
)
...
...
theano/tensor/tests/test_extra_ops.py
浏览文件 @
458a5ccd
...
@@ -61,24 +61,11 @@ class TestSearchsortedOp(utt.InferShapeTester):
...
@@ -61,24 +61,11 @@ class TestSearchsortedOp(utt.InferShapeTester):
self
.
idx_sorted
=
None
self
.
idx_sorted
=
None
def
test_searchsortedOp_on_sorted_input
(
self
):
def
test_searchsortedOp_on_sorted_input
(
self
):
f
=
theano
.
function
([
self
.
x
,
self
.
v
],
searchsorted
(
self
.
x
,
self
.
v
),
f
=
theano
.
function
([
self
.
x
,
self
.
v
],
searchsorted
(
self
.
x
,
self
.
v
))
mode
=
"DebugMode"
)
assert
np
.
allclose
(
assert
np
.
allclose
(
np
.
searchsorted
(
self
.
a
[
self
.
idx_sorted
],
self
.
b
),
np
.
searchsorted
(
self
.
a
[
self
.
idx_sorted
],
self
.
b
),
f
(
self
.
a
[
self
.
idx_sorted
],
self
.
b
))
f
(
self
.
a
[
self
.
idx_sorted
],
self
.
b
))
def
test_searchsortedOp_on_none_sorter
(
self
):
# Current implementation of numpy.searchsorted
# does not raise an error if `x` is not sorted and sorter is None.
sorter
=
T
.
vector
(
'sorter'
,
dtype
=
"int64"
)
f
=
theano
.
function
([
self
.
x
,
self
.
v
,
sorter
],
searchsorted
(
self
.
x
,
self
.
v
,
sorter
=
sorter
))
# assert np.allclose(
# np.searchsorted(self.a, self.b, sorter=None),
# f(self.a, self.b, sorter=None))
self
.
assertRaises
(
ValueError
,
f
,
self
.
a
[
self
.
idx_sorted
],
self
.
b
,
None
)
def
test_searchsortedOp_on_float_sorter
(
self
):
def
test_searchsortedOp_on_float_sorter
(
self
):
sorter
=
T
.
vector
(
'sorter'
,
dtype
=
"float32"
)
sorter
=
T
.
vector
(
'sorter'
,
dtype
=
"float32"
)
self
.
assertRaises
(
TypeError
,
searchsorted
,
self
.
assertRaises
(
TypeError
,
searchsorted
,
...
@@ -91,33 +78,18 @@ class TestSearchsortedOp(utt.InferShapeTester):
...
@@ -91,33 +78,18 @@ class TestSearchsortedOp(utt.InferShapeTester):
sorter
=
T
.
vector
(
'sorter'
,
dtype
=
dtype
)
sorter
=
T
.
vector
(
'sorter'
,
dtype
=
dtype
)
f
=
theano
.
function
([
self
.
x
,
self
.
v
,
sorter
],
f
=
theano
.
function
([
self
.
x
,
self
.
v
,
sorter
],
searchsorted
(
self
.
x
,
self
.
v
,
sorter
=
sorter
),
searchsorted
(
self
.
x
,
self
.
v
,
sorter
=
sorter
),
mode
=
"DebugMode"
,
allow_input_downcast
=
True
)
allow_input_downcast
=
True
)
assert
np
.
allclose
(
assert
np
.
allclose
(
np
.
searchsorted
(
self
.
a
,
self
.
b
,
sorter
=
self
.
idx_sorted
),
np
.
searchsorted
(
self
.
a
,
self
.
b
,
sorter
=
self
.
idx_sorted
),
f
(
self
.
a
,
self
.
b
,
self
.
idx_sorted
))
f
(
self
.
a
,
self
.
b
,
self
.
idx_sorted
))
def
test_searchsortedOp_on_right_side
(
self
):
def
test_searchsortedOp_on_right_side
(
self
):
f
=
theano
.
function
([
self
.
x
,
self
.
v
],
f
=
theano
.
function
([
self
.
x
,
self
.
v
],
searchsorted
(
self
.
x
,
self
.
v
,
side
=
'right'
),
searchsorted
(
self
.
x
,
self
.
v
,
side
=
'right'
))
mode
=
"DebugMode"
)
assert
np
.
allclose
(
assert
np
.
allclose
(
np
.
searchsorted
(
self
.
a
,
self
.
b
,
side
=
'right'
),
np
.
searchsorted
(
self
.
a
,
self
.
b
,
side
=
'right'
),
f
(
self
.
a
,
self
.
b
))
f
(
self
.
a
,
self
.
b
))
def
test_use_c_code
(
self
):
f
=
theano
.
function
([
self
.
x
,
self
.
v
],
searchsorted
(
self
.
x
,
self
.
v
),
mode
=
"FAST_RUN"
)
assert
np
.
allclose
(
np
.
searchsorted
(
self
.
a
[
self
.
idx_sorted
],
self
.
b
),
f
(
self
.
a
[
self
.
idx_sorted
],
self
.
b
))
f
=
theano
.
function
([
self
.
x
,
self
.
v
],
searchsorted
(
self
.
x
,
self
.
v
),
mode
=
theano
.
compile
.
Mode
(
linker
=
"c"
,
optimizer
=
'fast_run'
))
assert
np
.
allclose
(
np
.
searchsorted
(
self
.
a
[
self
.
idx_sorted
],
self
.
b
),
f
(
self
.
a
[
self
.
idx_sorted
],
self
.
b
))
def
test_infer_shape
(
self
):
def
test_infer_shape
(
self
):
# Test using default parameters' value
# Test using default parameters' value
self
.
_compile_and_check
([
self
.
x
,
self
.
v
],
self
.
_compile_and_check
([
self
.
x
,
self
.
v
],
...
@@ -133,26 +105,14 @@ class TestSearchsortedOp(utt.InferShapeTester):
...
@@ -133,26 +105,14 @@ class TestSearchsortedOp(utt.InferShapeTester):
self
.
op_class
)
self
.
op_class
)
# Test parameter ``side``
# Test parameter ``side``
self
.
a
=
np
.
ones
(
10
)
.
astype
(
config
.
floatX
)
l
a
=
np
.
ones
(
10
)
.
astype
(
config
.
floatX
)
self
.
b
=
np
.
ones
(
shape
=
(
1
,
2
,
3
))
.
astype
(
config
.
floatX
)
l
b
=
np
.
ones
(
shape
=
(
1
,
2
,
3
))
.
astype
(
config
.
floatX
)
self
.
_compile_and_check
([
self
.
x
,
self
.
v
],
self
.
_compile_and_check
([
self
.
x
,
self
.
v
],
[
searchsorted
(
self
.
x
,
self
.
v
,
side
=
'right'
)],
[
searchsorted
(
self
.
x
,
self
.
v
,
side
=
'right'
)],
[
self
.
a
,
self
.
b
],
[
la
,
l
b
],
self
.
op_class
)
self
.
op_class
)
def
test_grad
(
self
):
def
test_grad
(
self
):
self
.
a
=
np
.
random
.
random
(
100
)
.
astype
(
config
.
floatX
)
self
.
b
=
np
.
random
.
random
((
1
,
2
,
5
))
.
astype
(
config
.
floatX
)
self
.
idx_sorted
=
np
.
argsort
(
self
.
a
)
self
.
assertRaises
(
theano
.
gradient
.
NullTypeGradError
,
utt
.
verify_grad
,
self
.
op
,
[
self
.
a
[
self
.
idx_sorted
],
self
.
b
])
self
.
a
=
np
.
random
.
random
(
100
)
.
astype
(
config
.
floatX
)
self
.
b
=
np
.
random
.
random
(
10
)
.
astype
(
config
.
floatX
)
self
.
idx_sorted
=
np
.
argsort
(
self
.
a
)
utt
.
verify_grad
(
self
.
op
,
[
self
.
a
[
self
.
idx_sorted
],
self
.
b
])
utt
.
verify_grad
(
self
.
op
,
[
self
.
a
[
self
.
idx_sorted
],
self
.
b
])
...
...
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