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testgroup
pytensor
Commits
2fee841e
提交
2fee841e
authored
5月 10, 2022
作者:
Brandon T. Willard
提交者:
Brandon T. Willard
5月 11, 2022
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Add an option to print graph inputs in debugprint
上级
6965fdc1
隐藏空白字符变更
内嵌
并排
正在显示
2 个修改的文件
包含
166 行增加
和
32 行删除
+166
-32
printing.py
aesara/printing.py
+66
-17
test_printing.py
tests/scan/test_printing.py
+100
-15
没有找到文件。
aesara/printing.py
浏览文件 @
2fee841e
...
@@ -118,6 +118,7 @@ def debugprint(
...
@@ -118,6 +118,7 @@ def debugprint(
print_op_info
:
bool
=
False
,
print_op_info
:
bool
=
False
,
print_destroy_map
:
bool
=
False
,
print_destroy_map
:
bool
=
False
,
print_view_map
:
bool
=
False
,
print_view_map
:
bool
=
False
,
print_fgraph_inputs
:
bool
=
False
,
)
->
Union
[
str
,
IOBase
]:
)
->
Union
[
str
,
IOBase
]:
r"""Print a computation graph as text to stdout or a file.
r"""Print a computation graph as text to stdout or a file.
...
@@ -175,6 +176,8 @@ def debugprint(
...
@@ -175,6 +176,8 @@ def debugprint(
Whether to print the `destroy_map`\s of printed objects
Whether to print the `destroy_map`\s of printed objects
print_view_map
print_view_map
Whether to print the `view_map`\s of printed objects
Whether to print the `view_map`\s of printed objects
print_fgraph_inputs
Print the inputs of `FunctionGraph`\s.
Returns
Returns
-------
-------
...
@@ -197,7 +200,8 @@ def debugprint(
...
@@ -197,7 +200,8 @@ def debugprint(
if
used_ids
is
None
:
if
used_ids
is
None
:
used_ids
=
dict
()
used_ids
=
dict
()
results_to_print
=
[]
inputs_to_print
=
[]
outputs_to_print
=
[]
profile_list
:
List
[
Optional
[
Any
]]
=
[]
profile_list
:
List
[
Optional
[
Any
]]
=
[]
order
:
List
[
Optional
[
List
[
Apply
]]]
=
[]
# Toposort
order
:
List
[
Optional
[
List
[
Apply
]]]
=
[]
# Toposort
smap
:
List
[
Optional
[
StorageMapType
]]
=
[]
# storage_map
smap
:
List
[
Optional
[
StorageMapType
]]
=
[]
# storage_map
...
@@ -209,17 +213,19 @@ def debugprint(
...
@@ -209,17 +213,19 @@ def debugprint(
for
obj
in
lobj
:
for
obj
in
lobj
:
if
isinstance
(
obj
,
Variable
):
if
isinstance
(
obj
,
Variable
):
resul
ts_to_print
.
append
(
obj
)
outpu
ts_to_print
.
append
(
obj
)
profile_list
.
append
(
None
)
profile_list
.
append
(
None
)
smap
.
append
(
None
)
smap
.
append
(
None
)
order
.
append
(
None
)
order
.
append
(
None
)
elif
isinstance
(
obj
,
Apply
):
elif
isinstance
(
obj
,
Apply
):
resul
ts_to_print
.
extend
(
obj
.
outputs
)
outpu
ts_to_print
.
extend
(
obj
.
outputs
)
profile_list
.
extend
([
None
for
item
in
obj
.
outputs
])
profile_list
.
extend
([
None
for
item
in
obj
.
outputs
])
smap
.
extend
([
None
for
item
in
obj
.
outputs
])
smap
.
extend
([
None
for
item
in
obj
.
outputs
])
order
.
extend
([
None
for
item
in
obj
.
outputs
])
order
.
extend
([
None
for
item
in
obj
.
outputs
])
elif
isinstance
(
obj
,
Function
):
elif
isinstance
(
obj
,
Function
):
results_to_print
.
extend
(
obj
.
maker
.
fgraph
.
outputs
)
if
print_fgraph_inputs
:
inputs_to_print
.
extend
(
obj
.
maker
.
fgraph
.
inputs
)
outputs_to_print
.
extend
(
obj
.
maker
.
fgraph
.
outputs
)
profile_list
.
extend
([
obj
.
profile
for
item
in
obj
.
maker
.
fgraph
.
outputs
])
profile_list
.
extend
([
obj
.
profile
for
item
in
obj
.
maker
.
fgraph
.
outputs
])
if
print_storage
:
if
print_storage
:
smap
.
extend
([
obj
.
vm
.
storage_map
for
item
in
obj
.
maker
.
fgraph
.
outputs
])
smap
.
extend
([
obj
.
vm
.
storage_map
for
item
in
obj
.
maker
.
fgraph
.
outputs
])
...
@@ -228,7 +234,9 @@ def debugprint(
...
@@ -228,7 +234,9 @@ def debugprint(
topo
=
obj
.
maker
.
fgraph
.
toposort
()
topo
=
obj
.
maker
.
fgraph
.
toposort
()
order
.
extend
([
topo
for
item
in
obj
.
maker
.
fgraph
.
outputs
])
order
.
extend
([
topo
for
item
in
obj
.
maker
.
fgraph
.
outputs
])
elif
isinstance
(
obj
,
FunctionGraph
):
elif
isinstance
(
obj
,
FunctionGraph
):
results_to_print
.
extend
(
obj
.
outputs
)
if
print_fgraph_inputs
:
inputs_to_print
.
extend
(
obj
.
inputs
)
outputs_to_print
.
extend
(
obj
.
outputs
)
profile_list
.
extend
([
getattr
(
obj
,
"profile"
,
None
)
for
item
in
obj
.
outputs
])
profile_list
.
extend
([
getattr
(
obj
,
"profile"
,
None
)
for
item
in
obj
.
outputs
])
smap
.
extend
([
getattr
(
obj
,
"storage_map"
,
None
)
for
item
in
obj
.
outputs
])
smap
.
extend
([
getattr
(
obj
,
"storage_map"
,
None
)
for
item
in
obj
.
outputs
])
topo
=
obj
.
toposort
()
topo
=
obj
.
toposort
()
...
@@ -236,7 +244,7 @@ def debugprint(
...
@@ -236,7 +244,7 @@ def debugprint(
elif
isinstance
(
obj
,
(
int
,
float
,
np
.
ndarray
)):
elif
isinstance
(
obj
,
(
int
,
float
,
np
.
ndarray
)):
print
(
obj
,
file
=
_file
)
print
(
obj
,
file
=
_file
)
elif
isinstance
(
obj
,
(
In
,
Out
)):
elif
isinstance
(
obj
,
(
In
,
Out
)):
resul
ts_to_print
.
append
(
obj
.
variable
)
outpu
ts_to_print
.
append
(
obj
.
variable
)
profile_list
.
append
(
None
)
profile_list
.
append
(
None
)
smap
.
append
(
None
)
smap
.
append
(
None
)
order
.
append
(
None
)
order
.
append
(
None
)
...
@@ -268,7 +276,26 @@ N.B.:
...
@@ -268,7 +276,26 @@ N.B.:
op_information
=
{}
op_information
=
{}
for
r
,
p
,
s
,
o
in
zip
(
results_to_print
,
profile_list
,
smap
,
order
):
for
r
in
inputs_to_print
:
_debugprint
(
r
,
prefix
=
"-"
,
depth
=
depth
,
done
=
done
,
print_type
=
print_type
,
file
=
_file
,
ids
=
ids
,
inner_graph_ops
=
inner_graph_ops
,
stop_on_name
=
stop_on_name
,
used_ids
=
used_ids
,
op_information
=
op_information
,
parent_node
=
r
.
owner
,
print_op_info
=
print_op_info
,
print_destroy_map
=
print_destroy_map
,
print_view_map
=
print_view_map
,
)
for
r
,
p
,
s
,
o
in
zip
(
outputs_to_print
,
profile_list
,
smap
,
order
):
if
hasattr
(
r
.
owner
,
"op"
):
if
hasattr
(
r
.
owner
,
"op"
):
if
isinstance
(
r
.
owner
.
op
,
HasInnerGraph
)
and
r
not
in
inner_graph_ops
:
if
isinstance
(
r
.
owner
.
op
,
HasInnerGraph
)
and
r
not
in
inner_graph_ops
:
...
@@ -352,16 +379,39 @@ N.B.:
...
@@ -352,16 +379,39 @@ N.B.:
print_view_map
=
print_view_map
,
print_view_map
=
print_view_map
,
)
)
for
idx
,
i
in
enumerate
(
inner_outputs
):
if
print_fgraph_inputs
:
for
inp
in
inner_inputs
:
_debugprint
(
r
=
inp
,
prefix
=
"-"
,
depth
=
depth
,
done
=
done
,
print_type
=
print_type
,
file
=
_file
,
ids
=
ids
,
stop_on_name
=
stop_on_name
,
inner_graph_ops
=
inner_graph_ops
,
inner_to_outer_inputs
=
inner_to_outer_inputs
,
used_ids
=
used_ids
,
op_information
=
op_information
,
parent_node
=
s
.
owner
,
print_op_info
=
print_op_info
,
print_destroy_map
=
print_destroy_map
,
print_view_map
=
print_view_map
,
inner_graph_node
=
s
.
owner
,
)
inner_to_outer_inputs
=
None
for
out
in
inner_outputs
:
if
(
if
(
isinstance
(
getattr
(
i
.
owner
,
"op"
,
None
),
HasInnerGraph
)
isinstance
(
getattr
(
out
.
owner
,
"op"
,
None
),
HasInnerGraph
)
and
i
not
in
inner_graph_ops
and
out
not
in
inner_graph_ops
):
):
inner_graph_ops
.
append
(
i
)
inner_graph_ops
.
append
(
out
)
_debugprint
(
_debugprint
(
r
=
i
,
r
=
out
,
prefix
=
new_prefix
,
prefix
=
new_prefix
,
depth
=
depth
,
depth
=
depth
,
done
=
done
,
done
=
done
,
...
@@ -655,14 +705,13 @@ def _debugprint(
...
@@ -655,14 +705,13 @@ def _debugprint(
var_output
=
f
"{var_output} -> {outer_id_str}"
var_output
=
f
"{var_output} -> {outer_id_str}"
node_info
=
op_information
.
get
(
inner_graph_node
)
# TODO: This entire approach will only print `Op` info for two levels
# of nesting.
for
node
in
dict
.
fromkeys
([
inner_graph_node
,
parent_node
,
r
.
owner
]):
node_info
=
op_information
.
get
(
node
)
if
node_info
and
r
in
node_info
:
if
node_info
and
r
in
node_info
:
var_output
=
f
"{var_output} ({node_info[r]})"
var_output
=
f
"{var_output} ({node_info[r]})"
node_info
=
op_information
.
get
(
parent_node
)
or
op_information
.
get
(
r
.
owner
)
if
node_info
and
r
in
node_info
:
var_output
=
f
"{var_output} ({node_info[r]})"
print
(
var_output
,
file
=
file
)
print
(
var_output
,
file
=
file
)
return
file
return
file
...
...
tests/scan/test_printing.py
浏览文件 @
2fee841e
...
@@ -4,6 +4,7 @@ import pytest
...
@@ -4,6 +4,7 @@ import pytest
import
aesara
import
aesara
import
aesara.tensor
as
at
import
aesara.tensor
as
at
from
aesara.configdefaults
import
config
from
aesara.configdefaults
import
config
from
aesara.graph.fg
import
FunctionGraph
from
aesara.printing
import
debugprint
,
pydot_imported
,
pydotprint
from
aesara.printing
import
debugprint
,
pydot_imported
,
pydotprint
from
aesara.tensor.type
import
dvector
,
iscalar
,
scalar
,
vector
from
aesara.tensor.type
import
dvector
,
iscalar
,
scalar
,
vector
...
@@ -184,15 +185,13 @@ def test_debugprint_nitsot():
...
@@ -184,15 +185,13 @@ def test_debugprint_nitsot():
@config.change_flags
(
floatX
=
"float64"
)
@config.change_flags
(
floatX
=
"float64"
)
def
test_debugprint_nested_scans
():
def
test_debugprint_nested_scans
():
c
oefficients
=
dvector
(
"coefficients
"
)
c
=
dvector
(
"c
"
)
max_coefficients_supported
=
10
n
=
10
k
=
iscalar
(
"k"
)
k
=
iscalar
(
"k"
)
A
=
dvector
(
"A"
)
A
=
dvector
(
"A"
)
# compute A**k
def
compute_A_k
(
A
,
k
):
def
compute_A_k
(
A
,
k
):
# Symbolic description of the result
result
,
updates
=
aesara
.
scan
(
result
,
updates
=
aesara
.
scan
(
fn
=
lambda
prior_result
,
A
:
prior_result
*
A
,
fn
=
lambda
prior_result
,
A
:
prior_result
*
A
,
outputs_info
=
at
.
ones_like
(
A
),
outputs_info
=
at
.
ones_like
(
A
),
...
@@ -204,18 +203,13 @@ def test_debugprint_nested_scans():
...
@@ -204,18 +203,13 @@ def test_debugprint_nested_scans():
return
A_k
return
A_k
# Generate the components of the polynomial
components
,
updates
=
aesara
.
scan
(
components
,
updates
=
aesara
.
scan
(
fn
=
lambda
coefficient
,
power
,
some_A
,
some_k
:
coefficient
fn
=
lambda
c
,
power
,
some_A
,
some_k
:
c
*
(
compute_A_k
(
some_A
,
some_k
)
**
power
),
*
(
compute_A_k
(
some_A
,
some_k
)
**
power
),
outputs_info
=
None
,
outputs_info
=
None
,
sequences
=
[
c
oefficients
,
at
.
arange
(
max_coefficients_supported
)],
sequences
=
[
c
,
at
.
arange
(
n
)],
non_sequences
=
[
A
,
k
],
non_sequences
=
[
A
,
k
],
)
)
# Sum them up
final_result
=
components
.
sum
()
polynomial
=
components
.
sum
()
final_result
=
polynomial
output_str
=
debugprint
(
final_result
,
file
=
"str"
,
print_op_info
=
True
)
output_str
=
debugprint
(
final_result
,
file
=
"str"
,
print_op_info
=
True
)
lines
=
output_str
.
split
(
"
\n
"
)
lines
=
output_str
.
split
(
"
\n
"
)
...
@@ -225,8 +219,8 @@ def test_debugprint_nested_scans():
...
@@ -225,8 +219,8 @@ def test_debugprint_nested_scans():
|Elemwise{scalar_minimum,no_inplace} [id C] (outer_in_nit_sot-0)
|Elemwise{scalar_minimum,no_inplace} [id C] (outer_in_nit_sot-0)
| |Subtensor{int64} [id D]
| |Subtensor{int64} [id D]
| | |Shape [id E]
| | |Shape [id E]
| | | |Subtensor{int64::} [id F] 'c
oefficients
[0:]'
| | | |Subtensor{int64::} [id F] 'c[0:]'
| | | |c
oefficients
[id G]
| | | |c [id G]
| | | |ScalarConstant{0} [id H]
| | | |ScalarConstant{0} [id H]
| | |ScalarConstant{0} [id I]
| | |ScalarConstant{0} [id I]
| |Subtensor{int64} [id J]
| |Subtensor{int64} [id J]
...
@@ -239,7 +233,7 @@ def test_debugprint_nested_scans():
...
@@ -239,7 +233,7 @@ def test_debugprint_nested_scans():
| | |ScalarConstant{0} [id Q]
| | |ScalarConstant{0} [id Q]
| |ScalarConstant{0} [id R]
| |ScalarConstant{0} [id R]
|Subtensor{:int64:} [id S] (outer_in_seqs-0)
|Subtensor{:int64:} [id S] (outer_in_seqs-0)
| |Subtensor{int64::} [id F] 'c
oefficients
[0:]'
| |Subtensor{int64::} [id F] 'c[0:]'
| |ScalarFromTensor [id T]
| |ScalarFromTensor [id T]
| |Elemwise{scalar_minimum,no_inplace} [id C]
| |Elemwise{scalar_minimum,no_inplace} [id C]
|Subtensor{:int64:} [id U] (outer_in_seqs-1)
|Subtensor{:int64:} [id U] (outer_in_seqs-1)
...
@@ -295,6 +289,97 @@ def test_debugprint_nested_scans():
...
@@ -295,6 +289,97 @@ def test_debugprint_nested_scans():
for
truth
,
out
in
zip
(
expected_output
.
split
(
"
\n
"
),
lines
):
for
truth
,
out
in
zip
(
expected_output
.
split
(
"
\n
"
),
lines
):
assert
truth
.
strip
()
==
out
.
strip
()
assert
truth
.
strip
()
==
out
.
strip
()
fg
=
FunctionGraph
([
c
,
k
,
A
],
[
final_result
])
output_str
=
debugprint
(
fg
,
file
=
"str"
,
print_op_info
=
True
,
print_fgraph_inputs
=
True
)
lines
=
output_str
.
split
(
"
\n
"
)
expected_output
=
"""-c [id A]
-k [id B]
-A [id C]
Sum{acc_dtype=float64} [id D] 13
|for{cpu,scan_fn} [id E] 12 (outer_out_nit_sot-0)
|Elemwise{scalar_minimum,no_inplace} [id F] 7 (outer_in_nit_sot-0)
| |Subtensor{int64} [id G] 6
| | |Shape [id H] 5
| | | |Subtensor{int64::} [id I] 'c[0:]' 4
| | | |c [id A]
| | | |ScalarConstant{0} [id J]
| | |ScalarConstant{0} [id K]
| |Subtensor{int64} [id L] 3
| |Shape [id M] 2
| | |Subtensor{int64::} [id N] 1
| | |ARange{dtype='int64'} [id O] 0
| | | |TensorConstant{0} [id P]
| | | |TensorConstant{10} [id Q]
| | | |TensorConstant{1} [id R]
| | |ScalarConstant{0} [id S]
| |ScalarConstant{0} [id T]
|Subtensor{:int64:} [id U] 11 (outer_in_seqs-0)
| |Subtensor{int64::} [id I] 'c[0:]' 4
| |ScalarFromTensor [id V] 10
| |Elemwise{scalar_minimum,no_inplace} [id F] 7
|Subtensor{:int64:} [id W] 9 (outer_in_seqs-1)
| |Subtensor{int64::} [id N] 1
| |ScalarFromTensor [id X] 8
| |Elemwise{scalar_minimum,no_inplace} [id F] 7
|Elemwise{scalar_minimum,no_inplace} [id F] 7 (outer_in_nit_sot-0)
|A [id C] (outer_in_non_seqs-0)
|k [id B] (outer_in_non_seqs-1)
Inner graphs:
for{cpu,scan_fn} [id E] (outer_out_nit_sot-0)
-*0-<TensorType(float64, ())> [id Y] -> [id U] (inner_in_seqs-0)
-*1-<TensorType(int64, ())> [id Z] -> [id W] (inner_in_seqs-1)
-*2-<TensorType(float64, (None,))> [id BA] -> [id C] (inner_in_non_seqs-0)
-*3-<TensorType(int32, ())> [id BB] -> [id B] (inner_in_non_seqs-1)
>Elemwise{mul,no_inplace} [id BC] (inner_out_nit_sot-0)
> |InplaceDimShuffle{x} [id BD]
> | |*0-<TensorType(float64, ())> [id Y] (inner_in_seqs-0)
> |Elemwise{pow,no_inplace} [id BE]
> |Subtensor{int64} [id BF]
> | |Subtensor{int64::} [id BG]
> | | |for{cpu,scan_fn} [id BH] (outer_out_sit_sot-0)
> | | | |*3-<TensorType(int32, ())> [id BB] (inner_in_non_seqs-1) (n_steps)
> | | | |IncSubtensor{Set;:int64:} [id BI] (outer_in_sit_sot-0)
> | | | | |AllocEmpty{dtype='float64'} [id BJ]
> | | | | | |Elemwise{add,no_inplace} [id BK]
> | | | | | | |*3-<TensorType(int32, ())> [id BB] (inner_in_non_seqs-1)
> | | | | | | |Subtensor{int64} [id BL]
> | | | | | | |Shape [id BM]
> | | | | | | | |Rebroadcast{(0, False)} [id BN]
> | | | | | | | |InplaceDimShuffle{x,0} [id BO]
> | | | | | | | |Elemwise{second,no_inplace} [id BP]
> | | | | | | | |*2-<TensorType(float64, (None,))> [id BA] (inner_in_non_seqs-0)
> | | | | | | | |InplaceDimShuffle{x} [id BQ]
> | | | | | | | |TensorConstant{1.0} [id BR]
> | | | | | | |ScalarConstant{0} [id BS]
> | | | | | |Subtensor{int64} [id BT]
> | | | | | |Shape [id BU]
> | | | | | | |Rebroadcast{(0, False)} [id BN]
> | | | | | |ScalarConstant{1} [id BV]
> | | | | |Rebroadcast{(0, False)} [id BN]
> | | | | |ScalarFromTensor [id BW]
> | | | | |Subtensor{int64} [id BL]
> | | | |*2-<TensorType(float64, (None,))> [id BA] (inner_in_non_seqs-0) (outer_in_non_seqs-0)
> | | |ScalarConstant{1} [id BX]
> | |ScalarConstant{-1} [id BY]
> |InplaceDimShuffle{x} [id BZ]
> |*1-<TensorType(int64, ())> [id Z] (inner_in_seqs-1)
for{cpu,scan_fn} [id BH] (outer_out_sit_sot-0)
-*0-<TensorType(float64, (None,))> [id CA] -> [id BI] (inner_in_sit_sot-0)
-*1-<TensorType(float64, (None,))> [id CB] -> [id BA] (inner_in_non_seqs-0)
>Elemwise{mul,no_inplace} [id CC] (inner_out_sit_sot-0)
> |*0-<TensorType(float64, (None,))> [id CA] (inner_in_sit_sot-0)
> |*1-<TensorType(float64, (None,))> [id CB] (inner_in_non_seqs-0)"""
for
truth
,
out
in
zip
(
expected_output
.
split
(
"
\n
"
),
lines
):
assert
truth
.
strip
()
==
out
.
strip
()
@config.change_flags
(
floatX
=
"float64"
)
@config.change_flags
(
floatX
=
"float64"
)
def
test_debugprint_mitsot
():
def
test_debugprint_mitsot
():
...
...
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