Skip to content
项目
群组
代码片段
帮助
当前项目
正在载入...
登录 / 注册
切换导航面板
P
pytensor
项目
项目
详情
活动
周期分析
仓库
仓库
文件
提交
分支
标签
贡献者
图表
比较
统计图
议题
0
议题
0
列表
看板
标记
里程碑
合并请求
0
合并请求
0
CI / CD
CI / CD
流水线
作业
日程
统计图
Wiki
Wiki
代码片段
代码片段
成员
成员
折叠边栏
关闭边栏
活动
图像
聊天
创建新问题
作业
提交
问题看板
Open sidebar
testgroup
pytensor
Commits
134d270d
提交
134d270d
authored
12月 04, 2015
作者:
carriepl
浏览文件
操作
浏览文件
下载
差异文件
Merge pull request #3510 from aalmah/ticket_3359
Add n>1 experiment in multinomial sampling on CPU
上级
0db3f9af
8010cfcb
全部展开
隐藏空白字符变更
内嵌
并排
正在显示
5 个修改的文件
包含
111 行增加
和
64 行删除
+111
-64
multinomial.py
theano/sandbox/multinomial.py
+94
-45
rng_mrg.py
theano/sandbox/rng_mrg.py
+17
-19
multinomial_test_graph.pkl
theano/sandbox/tests/multinomial_test_graph.pkl
+0
-0
test_multinomial.py
theano/sandbox/tests/test_multinomial.py
+0
-0
test_rng_mrg.py
theano/sandbox/tests/test_rng_mrg.py
+0
-0
没有找到文件。
theano/sandbox/multinomial.py
浏览文件 @
134d270d
...
...
@@ -4,6 +4,8 @@ import theano
from
theano
import
Op
,
Apply
import
theano.tensor
as
T
from
theano.gof
import
local_optimizer
from
theano.tensor
import
NotScalarConstantError
,
get_scalar_constant_value
from
theano.scalar
import
as_scalar
from
theano.sandbox.cuda
import
cuda_available
,
GpuOp
if
cuda_available
:
...
...
@@ -33,7 +35,7 @@ class MultinomialFromUniform(Op):
except
AttributeError
:
self
.
odtype
=
'auto'
def
make_node
(
self
,
pvals
,
unis
):
def
make_node
(
self
,
pvals
,
unis
,
n
=
1
):
pvals
=
T
.
as_tensor_variable
(
pvals
)
unis
=
T
.
as_tensor_variable
(
unis
)
if
pvals
.
ndim
!=
2
:
...
...
@@ -45,18 +47,23 @@ class MultinomialFromUniform(Op):
else
:
odtype
=
self
.
odtype
out
=
T
.
tensor
(
dtype
=
odtype
,
broadcastable
=
pvals
.
type
.
broadcastable
)
return
Apply
(
self
,
[
pvals
,
unis
],
[
out
])
return
Apply
(
self
,
[
pvals
,
unis
,
as_scalar
(
n
)
],
[
out
])
def
grad
(
self
,
ins
,
outgrads
):
pvals
,
unis
=
ins
pvals
,
unis
,
n
=
ins
(
gz
,)
=
outgrads
return
[
T
.
zeros_like
(
x
)
for
x
in
ins
]
def
c_code_cache_version
(
self
):
return
(
6
,)
return
(
7
,)
def
c_code
(
self
,
node
,
name
,
ins
,
outs
,
sub
):
(
pvals
,
unis
)
=
ins
# support old pickled graphs
if
len
(
ins
)
==
2
:
(
pvals
,
unis
)
=
ins
n
=
1
else
:
(
pvals
,
unis
,
n
)
=
ins
(
z
,)
=
outs
if
self
.
odtype
==
'auto'
:
t
=
"PyArray_TYPE(
%(pvals)
s)"
%
locals
()
...
...
@@ -79,9 +86,9 @@ class MultinomialFromUniform(Op):
%(fail)
s;
}
if (PyArray_DIMS(
%(unis)
s)[0] !=
PyArray_DIMS(
%(pvals)
s)[0]
)
if (PyArray_DIMS(
%(unis)
s)[0] !=
(PyArray_DIMS(
%(pvals)
s)[0] *
%(n)
s)
)
{
PyErr_Format(PyExc_ValueError, "unis.shape[0] != pvals.shape[0]");
PyErr_Format(PyExc_ValueError, "unis.shape[0] != pvals.shape[0]
* n
");
%(fail)
s;
}
...
...
@@ -91,7 +98,7 @@ class MultinomialFromUniform(Op):
)
{
Py_XDECREF(
%(z)
s);
%(z)
s = (PyArrayObject*) PyArray_
ZEROS
(2,
%(z)
s = (PyArrayObject*) PyArray_
EMPTY
(2,
PyArray_DIMS(
%(pvals)
s),
%(t)
s,
0);
...
...
@@ -106,29 +113,42 @@ class MultinomialFromUniform(Op):
const int nb_multi = PyArray_DIMS(
%(pvals)
s)[0];
const int nb_outcomes = PyArray_DIMS(
%(pvals)
s)[1];
const int n_samples =
%(n)
s;
//
// For each multinomial, loop over each possible outcome
//
for (int n = 0; n < nb_multi; ++n)
{
int waiting = 1;
dtype_
%(pvals)
s cummul = 0.;
const dtype_
%(unis)
s* unis_n = (dtype_
%(unis)
s*)PyArray_GETPTR1(
%(unis)
s, n);
for (int m = 0; m < nb_outcomes; ++m)
for (int c = 0; c < n_samples; ++c){
for (int n = 0; n < nb_multi; ++n)
{
dtype_
%(z)
s* z_nm = (dtype_
%(z)
s*)PyArray_GETPTR2(
%(z)
s, n,m);
const dtype_
%(pvals)
s* pvals_nm = (dtype_
%(pvals)
s*)PyArray_GETPTR2(
%(pvals)
s, n,m);
cummul += *pvals_nm;
if (waiting && (cummul > *unis_n))
{
*z_nm = 1.;
waiting = 0;
}
else
int waiting = 1;
dtype_
%(pvals)
s cummul = 0.;
const dtype_
%(unis)
s* unis_n = (dtype_
%(unis)
s*)PyArray_GETPTR1(
%(unis)
s, c*nb_multi + n);
for (int m = 0; m < nb_outcomes; ++m)
{
// if we re-used old z pointer, we have to clear it out.
*z_nm = 0.;
dtype_
%(z)
s* z_nm = (dtype_
%(z)
s*)PyArray_GETPTR2(
%(z)
s, n,m);
const dtype_
%(pvals)
s* pvals_nm = (dtype_
%(pvals)
s*)PyArray_GETPTR2(
%(pvals)
s, n,m);
cummul += *pvals_nm;
if (c == 0)
{
if (waiting && (cummul > *unis_n))
{
*z_nm = 1.;
waiting = 0;
}
else
{
// if we re-used old z pointer, we have to clear it out.
*z_nm = 0.;
}
}
else {
if (cummul > *unis_n)
{
*z_nm = *z_nm + 1.;
break;
}
}
}
}
}
...
...
@@ -136,12 +156,17 @@ class MultinomialFromUniform(Op):
"""
%
locals
()
def
perform
(
self
,
node
,
ins
,
outs
):
(
pvals
,
unis
)
=
ins
# support old pickled graphs
if
len
(
ins
)
==
2
:
(
pvals
,
unis
)
=
ins
n_samples
=
1
else
:
(
pvals
,
unis
,
n_samples
)
=
ins
(
z
,)
=
outs
if
unis
.
shape
[
0
]
!=
pvals
.
shape
[
0
]:
raise
ValueError
(
"unis.shape[0] != pvals.shape[0]"
,
unis
.
shape
[
0
],
pvals
.
shape
[
0
])
if
unis
.
shape
[
0
]
!=
pvals
.
shape
[
0
]
*
n_samples
:
raise
ValueError
(
"unis.shape[0] != pvals.shape[0]
* n_samples
"
,
unis
.
shape
[
0
],
pvals
.
shape
[
0
]
,
n_samples
)
if
z
[
0
]
is
None
or
z
[
0
]
.
shape
!=
pvals
.
shape
:
z
[
0
]
=
numpy
.
zeros
(
pvals
.
shape
,
dtype
=
node
.
outputs
[
0
]
.
dtype
)
...
...
@@ -149,18 +174,24 @@ class MultinomialFromUniform(Op):
nb_outcomes
=
pvals
.
shape
[
1
]
# For each multinomial, loop over each possible outcome
for
n
in
range
(
nb_multi
):
waiting
=
True
cummul
=
0
unis_n
=
unis
[
n
]
for
m
in
range
(
nb_outcomes
):
cummul
+=
pvals
[
n
,
m
]
if
(
waiting
and
(
cummul
>
unis_n
)):
z
[
0
][
n
,
m
]
=
1
waiting
=
False
else
:
z
[
0
][
n
,
m
]
=
0
for
c
in
range
(
n_samples
):
for
n
in
range
(
nb_multi
):
waiting
=
True
cummul
=
0
unis_n
=
unis
[
n
]
for
m
in
range
(
nb_outcomes
):
cummul
+=
pvals
[
n
,
m
]
if
c
==
0
:
if
(
waiting
and
(
cummul
>
unis_n
)):
z
[
0
][
n
,
m
]
=
1
waiting
=
False
else
:
z
[
0
][
n
,
m
]
=
0
else
:
if
(
cummul
>
unis_n
):
z
[
0
][
n
,
m
]
+=
1
break
class
GpuMultinomialFromUniform
(
MultinomialFromUniform
,
GpuOp
):
...
...
@@ -346,7 +377,16 @@ class GpuMultinomialFromUniform(MultinomialFromUniform, GpuOp):
@local_optimizer
([
MultinomialFromUniform
])
def
local_gpu_multinomial
(
node
):
if
type
(
node
.
op
)
is
MultinomialFromUniform
:
p
,
u
=
node
.
inputs
if
len
(
node
.
inputs
)
==
2
:
p
,
u
=
node
.
inputs
n_samples
=
1
else
:
p
,
u
,
n_samples
=
node
.
inputs
try
:
if
get_scalar_constant_value
(
n_samples
)
!=
1
:
return
None
except
NotScalarConstantError
:
return
None
m
,
=
node
.
outputs
if
(
p
.
dtype
==
u
.
dtype
==
m
.
dtype
==
'float32'
and
any
([
i
.
owner
and
isinstance
(
i
.
owner
.
op
,
...
...
@@ -354,16 +394,25 @@ def local_gpu_multinomial(node):
for
i
in
node
.
inputs
])):
gpu_op
=
GpuMultinomialFromUniform
(
node
.
op
.
odtype
)
return
[
host_from_gpu
(
gpu_op
(
*
[
gpu_from_host
(
i
)
for
i
in
node
.
inputs
]))
.
T
]
for
i
in
[
p
,
u
]
]))
.
T
]
if
(
isinstance
(
node
.
op
,
theano
.
sandbox
.
cuda
.
GpuFromHost
)
and
node
.
inputs
[
0
]
.
owner
and
type
(
node
.
inputs
[
0
]
.
owner
.
op
)
is
MultinomialFromUniform
):
multi
=
node
.
inputs
[
0
]
.
owner
p
,
u
=
multi
.
inputs
if
len
(
node
.
inputs
)
==
2
:
p
,
u
=
node
.
inputs
n_samples
=
1
else
:
p
,
u
,
n_samples
=
node
.
inputs
try
:
if
get_scalar_constant_value
(
n_samples
)
!=
1
:
return
None
except
NotScalarConstantError
:
return
None
m
,
=
multi
.
outputs
if
(
p
.
dtype
==
u
.
dtype
==
m
.
dtype
==
'float32'
):
gpu_op
=
GpuMultinomialFromUniform
(
multi
.
op
.
odtype
)
ret
=
gpu_op
(
*
[
gpu_from_host
(
i
)
for
i
in
multi
.
inputs
])
.
T
ret
=
gpu_op
(
*
[
gpu_from_host
(
i
)
for
i
in
[
p
,
u
]
])
.
T
# The dimshuffle is on the cpu, but will be moved to the
# gpu by an opt.
return
[
gpu_from_host
(
ret
)]
...
...
theano/sandbox/rng_mrg.py
浏览文件 @
134d270d
...
...
@@ -19,7 +19,6 @@ from theano.tensor import (raw_random, TensorType, as_tensor_variable,
from
theano.tensor
import
sqrt
,
log
,
sin
,
cos
,
join
,
prod
from
theano.compile
import
optdb
from
theano.gof
import
local_optimizer
from
.
import
multinomial
from
theano.sandbox.cuda
import
cuda_available
,
cuda_enabled
,
GpuOp
...
...
@@ -1318,11 +1317,12 @@ class MRG_RandomStreams(object):
def
multinomial
(
self
,
size
=
None
,
n
=
1
,
pvals
=
None
,
ndim
=
None
,
dtype
=
'int64'
,
nstreams
=
None
):
"""
Sample `n` (
currently `n` needs to be
1) times from a multinomial
Sample `n` (
`n` needs to be >= 1, default
1) times from a multinomial
distribution defined by probabilities pvals.
Example : pvals = [[.98, .01, .01], [.01, .98, .01]] will
probably result in [[1,0,0],[0,1,0]].
Example : pvals = [[.98, .01, .01], [.01, .49, .50]] and n=1 will
probably result in [[1,0,0],[0,0,1]]. When setting n=2, this
will probably result in [[2,0,0],[0,1,1]].
Notes
-----
...
...
@@ -1345,25 +1345,23 @@ class MRG_RandomStreams(object):
"The specified size contains a dimension with value <= 0"
,
size
)
if
n
==
1
and
pvals
.
ndim
==
2
:
if
size
is
not
None
:
raise
ValueError
(
"Provided a size argument to "
"MRG_RandomStreams.multinomial, which does not use "
"the size argument."
)
if
ndim
is
not
None
:
raise
ValueError
(
"Provided an ndim argument to "
"MRG_RandomStreams.multinomial, which does not use "
"the ndim argument."
)
ndim
,
size
,
bcast
=
raw_random
.
_infer_ndim_bcast
(
ndim
,
size
,
pvals
[:,
0
])
assert
ndim
==
1
bcast
=
bcast
+
(
pvals
.
type
.
broadcastable
[
-
1
],)
if
size
is
not
None
:
raise
ValueError
(
"Provided a size argument to "
"MRG_RandomStreams.multinomial, which does not use "
"the size argument."
)
if
ndim
is
not
None
:
raise
ValueError
(
"Provided an ndim argument to "
"MRG_RandomStreams.multinomial, which does not use "
"the ndim argument."
)
if
pvals
.
ndim
==
2
:
size
=
pvals
[:,
0
]
.
shape
*
n
unis
=
self
.
uniform
(
size
=
size
,
ndim
=
1
,
nstreams
=
nstreams
)
op
=
multinomial
.
MultinomialFromUniform
(
dtype
)
return
op
(
pvals
,
unis
)
n_samples
=
as_tensor_variable
(
n
)
return
op
(
pvals
,
unis
,
n_samples
)
else
:
raise
NotImplementedError
((
"MRG_RandomStreams.multinomial only"
" implemented with n == 1 and
pvals.ndim = 2"
))
" implemented for
pvals.ndim = 2"
))
def
normal
(
self
,
size
,
avg
=
0.0
,
std
=
1.0
,
ndim
=
None
,
dtype
=
None
,
nstreams
=
None
):
...
...
theano/sandbox/tests/multinomial_test_graph.pkl
0 → 100644
浏览文件 @
134d270d
This source diff could not be displayed because it is too large. You can
view the blob
instead.
theano/sandbox/tests/test_multinomial.py
浏览文件 @
134d270d
差异被折叠。
点击展开。
theano/sandbox/tests/test_rng_mrg.py
浏览文件 @
134d270d
差异被折叠。
点击展开。
编写
预览
Markdown
格式
0%
重试
或
添加新文件
添加附件
取消
您添加了
0
人
到此讨论。请谨慎行事。
请先完成此评论的编辑!
取消
请
注册
或者
登录
后发表评论