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testgroup
pytensor
Commits
03d0e784
提交
03d0e784
authored
5月 07, 2015
作者:
Frédéric Bastien
浏览文件
操作
浏览文件
下载
差异文件
Merge pull request #2856 from abergeron/lstm_fixes
Lstm fixes
上级
40bb994b
9e00dfae
隐藏空白字符变更
内嵌
并排
正在显示
4 个修改的文件
包含
104 行增加
和
48 行删除
+104
-48
blas.py
theano/sandbox/gpuarray/blas.py
+44
-31
gpuarray_helper.h
theano/sandbox/gpuarray/gpuarray_helper.h
+27
-0
test_elemwise.py
theano/sandbox/gpuarray/tests/test_elemwise.py
+1
-1
type.py
theano/sandbox/gpuarray/type.py
+32
-16
没有找到文件。
theano/sandbox/gpuarray/blas.py
浏览文件 @
03d0e784
import
os.path
from
theano
import
Op
,
Apply
,
config
from
theano
import
Op
,
Apply
,
config
from
theano.compile
import
optdb
from
theano.gof
import
local_optimizer
,
LocalOptGroup
from
theano.tensor.blas
import
Dot22
,
Gemv
,
Gemm
,
Ger
from
theano.tensor.blas
import
Dot22
,
Gemv
,
Gemm
,
Ger
from
theano.tensor.opt
import
in2out
from
.basic_ops
import
HideC
,
as_gpuarray_variable
from
.basic_ops
import
HideC
,
as_gpuarray_variable
try
:
try
:
...
@@ -13,14 +19,35 @@ except ImportError as e:
...
@@ -13,14 +19,35 @@ except ImportError as e:
class
BlasOp
(
HideC
):
class
BlasOp
(
HideC
):
def
c_headers
(
self
):
def
c_headers
(
self
):
return
[
'<blas_api.h>'
]
return
[
'<blas_api.h>'
,
'<numpy_compat.h>'
,
'<gpuarray_helper.h>'
]
def
c_header_dirs
(
self
):
def
c_header_dirs
(
self
):
return
[
pygpu
.
get_include
()]
return
[
pygpu
.
get_include
()
,
os
.
path
.
dirname
(
__file__
)
]
def
c_init_code
(
self
):
def
c_init_code
(
self
):
return
[
'import_pygpu__blas();'
]
return
[
'import_pygpu__blas();'
]
def
c_support_code
(
self
):
return
"""
PyGpuArrayObject *gpublas_try_copy(PyGpuArrayObject *out,
PyGpuArrayObject *y) {
if (out &&
GpuArray_CHKFLAGS(&out->ga, GA_CARRAY) &&
theano_size_check(out, PyGpuArray_NDIM(y),
PyGpuArray_DIMS(y),
y->ga.typecode)) {
if (pygpu_move(out, y)) {
Py_XDECREF(out);
return NULL;
}
} else {
Py_XDECREF(out);
out = pygpu_copy(y, GA_ANY_ORDER);
}
return out;
}
"""
class
GpuGemv
(
BlasOp
,
Gemv
):
class
GpuGemv
(
BlasOp
,
Gemv
):
def
make_node
(
self
,
y
,
alpha
,
A
,
x
,
beta
):
def
make_node
(
self
,
y
,
alpha
,
A
,
x
,
beta
):
...
@@ -44,21 +71,20 @@ class GpuGemv(BlasOp, Gemv):
...
@@ -44,21 +71,20 @@ class GpuGemv(BlasOp, Gemv):
beta
=
inp
[
4
],
fail
=
sub
[
'fail'
],
name
=
name
)
beta
=
inp
[
4
],
fail
=
sub
[
'fail'
],
name
=
name
)
if
self
.
inplace
:
if
self
.
inplace
:
code
=
"""
code
=
"""
Py_XDECREF(
%(out)
s);
if (
%(y)
s->ga.strides[0] <= 0) {
if (
%(y)
s->ga.strides[0] <= 0) {
%(out)
s =
pygpu_copy(
%(y)
s, GA_ANY_ORDER
);
%(out)
s =
gpublas_try_copy(
%(out)
s,
%(y)
s
);
if (
%(out)
s == NULL) {
if (
%(out)
s == NULL) {
%(fail)
s
%(fail)
s
}
}
} else {
} else {
Py_XDECREF(
%(out)
s);
%(out)
s =
%(y)
s;
%(out)
s =
%(y)
s;
Py_INCREF(
%(out)
s);
Py_INCREF(
%(out)
s);
}
}
"""
%
vars
"""
%
vars
else
:
else
:
code
=
"""
code
=
"""
Py_XDECREF(
%(out)
s);
%(out)
s = gpublas_try_copy(
%(out)
s,
%(y)
s);
%(out)
s = pygpu_copy(
%(y)
s, GA_ANY_ORDER);
if (
%(out)
s == NULL) {
if (
%(out)
s == NULL) {
%(fail)
s
%(fail)
s
}
}
...
@@ -79,7 +105,7 @@ class GpuGemv(BlasOp, Gemv):
...
@@ -79,7 +105,7 @@ class GpuGemv(BlasOp, Gemv):
return
code
return
code
def
c_code_cache_version
(
self
):
def
c_code_cache_version
(
self
):
return
(
2
,)
return
(
3
,)
gpugemv_no_inplace
=
GpuGemv
(
inplace
=
False
)
gpugemv_no_inplace
=
GpuGemv
(
inplace
=
False
)
gpugemv_inplace
=
GpuGemv
(
inplace
=
True
)
gpugemv_inplace
=
GpuGemv
(
inplace
=
True
)
...
@@ -107,13 +133,13 @@ class GpuGemm(BlasOp, Gemm):
...
@@ -107,13 +133,13 @@ class GpuGemm(BlasOp, Gemm):
beta
=
inp
[
4
],
fail
=
sub
[
'fail'
],
name
=
name
)
beta
=
inp
[
4
],
fail
=
sub
[
'fail'
],
name
=
name
)
if
self
.
inplace
:
if
self
.
inplace
:
code
=
"""
code
=
"""
Py_XDECREF(
%(out)
s);
if (!GpuArray_ISONESEGMENT(&
%(C)
s->ga)) {
if (!GpuArray_ISONESEGMENT(&
%(C)
s->ga)) {
%(out)
s =
pygpu_copy(
%(C)
s, GA_ANY_ORDER
);
%(out)
s =
gpublas_try_copy(
%(out)
s,
%(C)
s
);
if (
%(out)
s == NULL) {
if (
%(out)
s == NULL) {
%(fail)
s
%(fail)
s
}
}
} else {
} else {
Py_XDECREF(
%(out)
s);
%(out)
s =
%(C)
s;
%(out)
s =
%(C)
s;
Py_INCREF(
%(out)
s);
Py_INCREF(
%(out)
s);
}
}
...
@@ -121,7 +147,7 @@ class GpuGemm(BlasOp, Gemm):
...
@@ -121,7 +147,7 @@ class GpuGemm(BlasOp, Gemm):
else
:
else
:
code
=
"""
code
=
"""
Py_XDECREF(
%(out)
s);
Py_XDECREF(
%(out)
s);
%(out)
s =
pygpu_copy(
%(C)
s, GA_ANY_ORDER
);
%(out)
s =
gpublas_try_copy(
%(out)
s,
%(C)
s
);
if (
%(out)
s == NULL) {
if (
%(out)
s == NULL) {
%(fail)
s
%(fail)
s
}
}
...
@@ -142,7 +168,7 @@ class GpuGemm(BlasOp, Gemm):
...
@@ -142,7 +168,7 @@ class GpuGemm(BlasOp, Gemm):
return
code
return
code
def
c_code_cache_version
(
self
):
def
c_code_cache_version
(
self
):
return
(
2
,)
return
(
3
,)
gpugemm_no_inplace
=
GpuGemm
(
inplace
=
False
)
gpugemm_no_inplace
=
GpuGemm
(
inplace
=
False
)
...
@@ -171,21 +197,20 @@ class GpuGer(BlasOp, Ger):
...
@@ -171,21 +197,20 @@ class GpuGer(BlasOp, Ger):
fail
=
sub
[
'fail'
],
name
=
name
)
fail
=
sub
[
'fail'
],
name
=
name
)
if
self
.
destructive
:
if
self
.
destructive
:
code
=
"""
code
=
"""
Py_XDECREF(
%(out)
s);
if (!GpuArray_ISONESEGMENT(&
%(A)
s->ga)) {
if (!GpuArray_ISONESEGMENT(&
%(A)
s->ga)) {
%(out)
s =
pygpu_copy(
%(A)
s, GA_ANY_ORDER
);
%(out)
s =
gpublas_try_copy(
%(out)
s,
%(A)
s
);
if (
%(out)
s == NULL) {
if (
%(out)
s == NULL) {
%(fail)
s
%(fail)
s
}
}
} else {
} else {
Py_XDECREF(
%(out)
s);
%(out)
s =
%(A)
s;
%(out)
s =
%(A)
s;
Py_INCREF(
%(out)
s);
Py_INCREF(
%(out)
s);
}
}
"""
%
vars
"""
%
vars
else
:
else
:
code
=
"""
code
=
"""
Py_XDECREF(
%(out)
s);
%(out)
s = gpublas_try_copy(
%(out)
s,
%(A)
s);
%(out)
s = pygpu_copy(
%(A)
s, GA_ANY_ORDER);
if (
%(out)
s == NULL) {
if (
%(out)
s == NULL) {
%(fail)
s
%(fail)
s
}
}
...
@@ -203,7 +228,7 @@ class GpuGer(BlasOp, Ger):
...
@@ -203,7 +228,7 @@ class GpuGer(BlasOp, Ger):
return
code
return
code
def
c_code_cache_version
(
self
):
def
c_code_cache_version
(
self
):
return
(
1
,)
return
(
2
,)
gpuger_no_inplace
=
GpuGer
(
destructive
=
False
)
gpuger_no_inplace
=
GpuGer
(
destructive
=
False
)
...
@@ -239,11 +264,8 @@ class GpuDot22(BlasOp, Dot22):
...
@@ -239,11 +264,8 @@ class GpuDot22(BlasOp, Dot22):
dims[0] = PyGpuArray_DIMS(
%(A)
s)[0];
dims[0] = PyGpuArray_DIMS(
%(A)
s)[0];
dims[1] = PyGpuArray_DIMS(
%(B)
s)[1];
dims[1] = PyGpuArray_DIMS(
%(B)
s)[1];
%(out)
s = pygpu_empty(2, dims,
if (theano_prep_output(&
%(out)
s, 2, dims,
%(typecode)
s, GA_C_ORDER,
%(typecode)
s,
pygpu_default_context())) {
GA_C_ORDER,
pygpu_default_context(), Py_None);
if (!
%(out)
s) {
%(fail)
s
%(fail)
s
}
}
...
@@ -262,19 +284,10 @@ class GpuDot22(BlasOp, Dot22):
...
@@ -262,19 +284,10 @@ class GpuDot22(BlasOp, Dot22):
return
code
return
code
def
c_code_cache_version
(
self
):
def
c_code_cache_version
(
self
):
return
(
1
,)
return
(
3
,)
def
c_headers
(
self
):
ret
=
super
(
GpuDot22
,
self
)
.
c_headers
()
return
ret
+
[
'<numpy_compat.h>'
]
gpu_dot22
=
GpuDot22
()
gpu_dot22
=
GpuDot22
()
from
theano.compile
import
optdb
from
theano.gof
import
local_optimizer
,
LocalOptGroup
from
theano.tensor.opt
import
in2out
@local_optimizer
([
gpugemv_no_inplace
],
inplace
=
True
)
@local_optimizer
([
gpugemv_no_inplace
],
inplace
=
True
)
def
local_inplace_gpuagemv
(
node
):
def
local_inplace_gpuagemv
(
node
):
if
node
.
op
==
gpugemv_no_inplace
:
if
node
.
op
==
gpugemv_no_inplace
:
...
...
theano/sandbox/gpuarray/gpuarray_helper.h
0 → 100644
浏览文件 @
03d0e784
#ifndef THEANO_GPUARRAY_HELPER
#define THEANO_GPUARRAY_HELPER
#include <string.h>
#include <gpuarray_api.h>
#include <numpy_compat.h>
static
int
theano_size_check
(
PyGpuArrayObject
*
a
,
unsigned
int
nd
,
const
size_t
*
dims
,
int
typecode
)
{
return
(
a
->
ga
.
nd
==
nd
&&
a
->
ga
.
typecode
==
typecode
&&
memcmp
(
a
->
ga
.
dimensions
,
dims
,
nd
*
sizeof
(
size_t
))
==
0
);
}
static
int
theano_prep_output
(
PyGpuArrayObject
**
out
,
unsigned
int
nd
,
const
size_t
*
dims
,
int
typecode
,
ga_order
ord
,
PyGpuContextObject
*
c
)
{
if
(
*
out
!=
NULL
&&
theano_size_check
(
*
out
,
nd
,
dims
,
typecode
))
{
return
0
;
}
Py_XDECREF
(
*
out
);
*
out
=
pygpu_empty
(
nd
,
dims
,
typecode
,
ord
,
c
,
Py_None
);
return
(
*
out
==
NULL
)
?
1
:
0
;
}
#endif
theano/sandbox/gpuarray/tests/test_elemwise.py
浏览文件 @
03d0e784
...
@@ -10,7 +10,7 @@ from ..elemwise import (GpuElemwise, GpuDimShuffle,
...
@@ -10,7 +10,7 @@ from ..elemwise import (GpuElemwise, GpuDimShuffle,
GpuCAReduceCuda
,
GpuCAReduceCPY
)
GpuCAReduceCuda
,
GpuCAReduceCPY
)
from
..type
import
GpuArrayType
from
..type
import
GpuArrayType
from
pygpu
.array
import
gpuarray
from
pygpu
import
ndgpuarray
as
gpuarray
# This is acutally a test for GpuElemwise
# This is acutally a test for GpuElemwise
...
...
theano/sandbox/gpuarray/type.py
浏览文件 @
03d0e784
...
@@ -40,7 +40,12 @@ class GpuArrayType(Type):
...
@@ -40,7 +40,12 @@ class GpuArrayType(Type):
return
"GpuArrayType(
%
s,
%
s)"
%
(
self
.
dtype
,
self
.
broadcastable
)
return
"GpuArrayType(
%
s,
%
s)"
%
(
self
.
dtype
,
self
.
broadcastable
)
def
filter
(
self
,
data
,
strict
=
False
,
allow_downcast
=
None
):
def
filter
(
self
,
data
,
strict
=
False
,
allow_downcast
=
None
):
if
strict
:
if
(
isinstance
(
data
,
gpuarray
.
GpuArray
)
and
data
.
typecode
==
self
.
typecode
):
# This is just to make this condition not enter the
# following branches
pass
elif
strict
:
if
not
isinstance
(
data
,
gpuarray
.
GpuArray
):
if
not
isinstance
(
data
,
gpuarray
.
GpuArray
):
raise
TypeError
(
"
%
s expected a GpuArray object."
%
self
,
raise
TypeError
(
"
%
s expected a GpuArray object."
%
self
,
data
,
type
(
data
))
data
,
type
(
data
))
...
@@ -50,13 +55,24 @@ class GpuArrayType(Type):
...
@@ -50,13 +55,24 @@ class GpuArrayType(Type):
(
self
,
self
.
typecode
,
self
.
dtype
,
(
self
,
self
.
typecode
,
self
.
dtype
,
data
.
typecode
,
str
(
data
.
dtype
)))
data
.
typecode
,
str
(
data
.
dtype
)))
# fallthrough to ndim check
# fallthrough to ndim check
elif
allow_downcast
:
elif
(
allow_downcast
or
(
allow_downcast
is
None
and
type
(
data
)
==
float
and
self
.
dtype
==
config
.
floatX
)):
data
=
gpuarray
.
array
(
data
,
dtype
=
self
.
typecode
,
copy
=
False
,
data
=
gpuarray
.
array
(
data
,
dtype
=
self
.
typecode
,
copy
=
False
,
ndmin
=
len
(
self
.
broadcastable
))
ndmin
=
len
(
self
.
broadcastable
))
else
:
else
:
if
not
hasattr
(
data
,
'dtype'
):
# This is to convert objects that don't have a dtype
# (like lists). We anticipate that the type below
# will match and we pass copy=False so it won't make a
# second object on the GPU.
data
=
gpuarray
.
array
(
data
,
copy
=
False
)
up_dtype
=
scalar
.
upcast
(
self
.
dtype
,
data
.
dtype
)
up_dtype
=
scalar
.
upcast
(
self
.
dtype
,
data
.
dtype
)
if
up_dtype
==
self
.
dtype
:
if
up_dtype
==
self
.
dtype
:
data
=
gpuarray
.
array
(
data
,
dtype
=
self
.
dtype
,
copy
=
False
)
data
=
gpuarray
.
array
(
data
,
dtype
=
self
.
dtype
,
copy
=
False
)
else
:
else
:
raise
TypeError
(
"
%
s cannot store a value of dtype
%
s "
raise
TypeError
(
"
%
s cannot store a value of dtype
%
s "
"without risking loss of precision."
%
"without risking loss of precision."
%
...
@@ -150,18 +166,15 @@ class GpuArrayType(Type):
...
@@ -150,18 +166,15 @@ class GpuArrayType(Type):
def
convert_variable
(
self
,
var
):
def
convert_variable
(
self
,
var
):
if
(
type
(
self
)
==
type
(
var
.
type
)
and
if
(
type
(
self
)
==
type
(
var
.
type
)
and
self
.
typecode
==
var
.
type
.
typecode
and
self
.
typecode
==
var
.
type
.
typecode
and
self
.
ndim
==
var
.
type
.
ndim
and
self
.
ndim
==
var
.
type
.
ndim
and
all
(
sb
==
ob
or
ob
for
sb
,
ob
in
zip
(
self
.
broadcastable
,
all
(
sb
==
ob
or
ob
for
sb
,
ob
in
zip
(
self
.
broadcastable
,
var
.
type
.
broadcastable
))):
var
.
type
.
broadcastable
))):
return
theano
.
tensor
.
patternbroadcast
(
var
,
self
.
broadcastable
)
return
theano
.
tensor
.
patternbroadcast
(
var
,
self
.
broadcastable
)
def
__hash__
(
self
):
def
__hash__
(
self
):
return
(
hash
(
self
.
typecode
)
^
hash
(
self
.
broadcastable
))
return
(
hash
(
self
.
typecode
)
^
hash
(
self
.
broadcastable
))
def
__str__
(
self
):
return
"GpuArray<
%
s>"
%
(
self
.
dtype
,)
def
dtype_specs
(
self
):
def
dtype_specs
(
self
):
"""Return a tuple (python type, c type, numpy typenum) that corresponds
"""Return a tuple (python type, c type, numpy typenum) that corresponds
to self.dtype.
to self.dtype.
...
@@ -250,9 +263,9 @@ class GpuArrayType(Type):
...
@@ -250,9 +263,9 @@ class GpuArrayType(Type):
def
c_headers
(
self
):
def
c_headers
(
self
):
# We need arrayobject for the PyArrayDescr struct def
# We need arrayobject for the PyArrayDescr struct def
# (even if we just use a pointer to it in a function def)
# (even if we just use a pointer to it in a function def)
return
[
'<gpuarray/array.h>'
,
'<gpuarray/kernel.h>'
,
'<gpuarray/error.h>'
,
return
[
'<gpuarray/array.h>'
,
'<gpuarray/kernel.h>'
,
'<gpuarray/
buffer_blas.h>'
,
'<numpy/arrayobject
.h>'
,
'<gpuarray/
error.h>'
,
'<gpuarray/buffer_blas
.h>'
,
'<gpuarray_api.h>'
]
'<
numpy/arrayobject.h>'
,
'<
gpuarray_api.h>'
]
def
c_header_dirs
(
self
):
def
c_header_dirs
(
self
):
return
[
pygpu
.
get_include
(),
numpy
.
get_include
()]
return
[
pygpu
.
get_include
(),
numpy
.
get_include
()]
...
@@ -284,8 +297,9 @@ GpuArrayType.Variable = GpuArrayVariable
...
@@ -284,8 +297,9 @@ GpuArrayType.Variable = GpuArrayVariable
class
GpuArraySignature
(
tensor
.
TensorConstantSignature
):
class
GpuArraySignature
(
tensor
.
TensorConstantSignature
):
pass
# might do something better if we can run the sum on the
# might do something better if we can run the sum on the GPU, but
# GPU, but for now this will suffice.
# for now this will suffice.
pass
class
GpuArrayConstant
(
_operators
,
Constant
):
class
GpuArrayConstant
(
_operators
,
Constant
):
...
@@ -312,7 +326,9 @@ class GpuArraySharedVariable(_operators, SharedVariable):
...
@@ -312,7 +326,9 @@ class GpuArraySharedVariable(_operators, SharedVariable):
return
numpy
.
asarray
(
self
.
container
.
value
)
return
numpy
.
asarray
(
self
.
container
.
value
)
def
set_value
(
self
,
value
,
borrow
=
False
):
def
set_value
(
self
,
value
,
borrow
=
False
):
self
.
container
.
value
=
pygpu
.
gpuarray
.
array
(
value
,
copy
=
(
not
borrow
))
if
isinstance
(
value
,
pygpu
.
gpuarray
.
GpuArray
):
value
=
pygpu
.
gpuarray
.
array
(
value
,
copy
=
(
not
borrow
))
self
.
container
.
value
=
value
def
__getitem__
(
self
,
*
args
):
def
__getitem__
(
self
,
*
args
):
return
_operators
.
__getitem__
(
self
,
*
args
)
return
_operators
.
__getitem__
(
self
,
*
args
)
...
...
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