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testgroup
pytensor
Commits
fc985340
提交
fc985340
authored
4月 16, 2022
作者:
Brandon T. Willard
提交者:
Brandon T. Willard
4月 16, 2022
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Rename rv_numpy_tester to compare_sample_values and update/add docstrings
上级
9a65fcd7
隐藏空白字符变更
内嵌
并排
正在显示
1 个修改的文件
包含
83 行增加
和
70 行删除
+83
-70
test_basic.py
tests/tensor/random/test_basic.py
+83
-70
没有找到文件。
tests/tensor/random/test_basic.py
浏览文件 @
fc985340
...
...
@@ -63,6 +63,8 @@ py_mode = Mode("py", opts)
def
fixed_scipy_rvs
(
rvs_name
):
"""Create a SciPy sampling function compatible with the `test_fn` argument of `compare_sample_values`."""
def
_rvs
(
*
args
,
size
=
None
,
**
kwargs
):
res
=
getattr
(
stats
,
rvs_name
)
.
rvs
(
*
args
,
size
=
size
,
**
kwargs
)
res
=
np
.
broadcast_to
(
...
...
@@ -76,9 +78,12 @@ def fixed_scipy_rvs(rvs_name):
return
_rvs
def
rv_numpy_tester
(
rv
,
*
params
,
rng
=
None
,
test_fn
=
None
,
**
kwargs
):
"""Test for correspondence between `RandomVariable` and NumPy shape and
broadcast dimensions.
def
compare_sample_values
(
rv
,
*
params
,
rng
=
None
,
test_fn
=
None
,
**
kwargs
):
"""Test for equivalence between `RandomVariable` and NumPy/other samples.
An equivalently named method on a NumPy RNG object will be used, unless
`test_fn` is specified.
"""
if
rng
is
None
:
rng
=
np
.
random
.
default_rng
()
...
...
@@ -137,11 +142,11 @@ def rv_numpy_tester(rv, *params, rng=None, test_fn=None, **kwargs):
],
)
def
test_uniform_samples
(
u
,
l
,
size
):
rv_numpy_tester
(
uniform
,
u
,
l
,
size
=
size
)
compare_sample_values
(
uniform
,
u
,
l
,
size
=
size
)
def
test_uniform_default_args
():
rv_numpy_tester
(
uniform
)
compare_sample_values
(
uniform
)
@pytest.mark.parametrize
(
...
...
@@ -168,7 +173,7 @@ def test_uniform_default_args():
],
)
def
test_triangular_samples
(
left
,
mode
,
right
,
size
):
rv_numpy_tester
(
triangular
,
left
,
mode
,
right
,
size
=
size
)
compare_sample_values
(
triangular
,
left
,
mode
,
right
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -184,7 +189,7 @@ def test_triangular_samples(left, mode, right, size):
],
)
def
test_beta_samples
(
a
,
b
,
size
):
rv_numpy_tester
(
beta
,
a
,
b
,
size
=
size
)
compare_sample_values
(
beta
,
a
,
b
,
size
=
size
)
M_at
=
iscalar
(
"M"
)
...
...
@@ -286,11 +291,11 @@ def test_normal_ShapeFeature():
],
)
def
test_normal_samples
(
mean
,
sigma
,
size
):
rv_numpy_tester
(
normal
,
mean
,
sigma
,
size
=
size
)
compare_sample_values
(
normal
,
mean
,
sigma
,
size
=
size
)
def
test_normal_default_args
():
rv_numpy_tester
(
standard_normal
)
compare_sample_values
(
standard_normal
)
@pytest.mark.parametrize
(
...
...
@@ -306,7 +311,7 @@ def test_normal_default_args():
],
)
def
test_halfnormal_samples
(
mean
,
sigma
,
size
):
rv_numpy_tester
(
compare_sample_values
(
halfnormal
,
mean
,
sigma
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"halfnorm"
)
)
...
...
@@ -324,7 +329,7 @@ def test_halfnormal_samples(mean, sigma, size):
],
)
def
test_lognormal_samples
(
mean
,
sigma
,
size
):
rv_numpy_tester
(
lognormal
,
mean
,
sigma
,
size
=
size
)
compare_sample_values
(
lognormal
,
mean
,
sigma
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -345,7 +350,7 @@ def test_gamma_samples(a, b, size):
def
test_fn
(
shape
,
rate
,
**
kwargs
):
return
gamma_test_fn
(
shape
,
scale
=
1.0
/
rate
,
**
kwargs
)
rv_numpy_tester
(
compare_sample_values
(
gamma
,
a
,
b
,
...
...
@@ -363,7 +368,7 @@ def test_gamma_samples(a, b, size):
],
)
def
test_chisquare_samples
(
df
,
size
):
rv_numpy_tester
(
chisquare
,
df
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"chi2"
))
compare_sample_values
(
chisquare
,
df
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"chi2"
))
@pytest.mark.parametrize
(
...
...
@@ -379,7 +384,9 @@ def test_chisquare_samples(df, size):
],
)
def
test_gumbel_samples
(
mu
,
beta
,
size
):
rv_numpy_tester
(
gumbel
,
mu
,
beta
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"gumbel_r"
))
compare_sample_values
(
gumbel
,
mu
,
beta
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"gumbel_r"
)
)
@pytest.mark.parametrize
(
...
...
@@ -394,11 +401,11 @@ def test_gumbel_samples(mu, beta, size):
],
)
def
test_exponential_samples
(
lam
,
size
):
rv_numpy_tester
(
exponential
,
lam
,
size
=
size
)
compare_sample_values
(
exponential
,
lam
,
size
=
size
)
def
test_exponential_default_args
():
rv_numpy_tester
(
exponential
)
compare_sample_values
(
exponential
)
@pytest.mark.parametrize
(
...
...
@@ -413,7 +420,7 @@ def test_exponential_default_args():
],
)
def
test_weibull_samples
(
alpha
,
size
):
rv_numpy_tester
(
weibull
,
alpha
,
size
=
size
)
compare_sample_values
(
weibull
,
alpha
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -429,11 +436,11 @@ def test_weibull_samples(alpha, size):
],
)
def
test_logistic_samples
(
loc
,
scale
,
size
):
rv_numpy_tester
(
logistic
,
loc
,
scale
,
size
=
size
)
compare_sample_values
(
logistic
,
loc
,
scale
,
size
=
size
)
def
test_logistic_default_args
():
rv_numpy_tester
(
logistic
)
compare_sample_values
(
logistic
)
@pytest.mark.parametrize
(
...
...
@@ -453,7 +460,7 @@ def test_logistic_default_args():
],
)
def
test_vonmises_samples
(
mu
,
kappa
,
size
):
rv_numpy_tester
(
vonmises
,
mu
,
kappa
,
size
=
size
)
compare_sample_values
(
vonmises
,
mu
,
kappa
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -468,7 +475,7 @@ def test_vonmises_samples(mu, kappa, size):
],
)
def
test_pareto_samples
(
alpha
,
size
):
rv_numpy_tester
(
pareto
,
alpha
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"pareto"
))
compare_sample_values
(
pareto
,
alpha
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"pareto"
))
def
mvnormal_test_fn
(
mean
=
None
,
cov
=
None
,
size
=
None
,
random_state
=
None
):
...
...
@@ -561,11 +568,13 @@ def mvnormal_test_fn(mean=None, cov=None, size=None, random_state=None):
],
)
def
test_mvnormal_samples
(
mu
,
cov
,
size
):
rv_numpy_tester
(
multivariate_normal
,
mu
,
cov
,
size
=
size
,
test_fn
=
mvnormal_test_fn
)
compare_sample_values
(
multivariate_normal
,
mu
,
cov
,
size
=
size
,
test_fn
=
mvnormal_test_fn
)
def
test_mvnormal_default_args
():
rv_numpy_tester
(
multivariate_normal
,
test_fn
=
mvnormal_test_fn
)
compare_sample_values
(
multivariate_normal
,
test_fn
=
mvnormal_test_fn
)
with
pytest
.
raises
(
ValueError
,
match
=
"shape mismatch.*"
):
multivariate_normal
.
rng_fn
(
...
...
@@ -637,7 +646,7 @@ def test_dirichlet_samples(alphas, size):
size
=
()
return
dirichlet
.
rng_fn
(
random_state
,
alphas
,
size
)
rv_numpy_tester
(
dirichlet
,
alphas
,
size
=
size
,
test_fn
=
dirichlet_test_fn
)
compare_sample_values
(
dirichlet
,
alphas
,
size
=
size
,
test_fn
=
dirichlet_test_fn
)
def
test_dirichlet_rng
():
...
...
@@ -723,11 +732,11 @@ def test_dirichlet_ShapeFeature():
],
)
def
test_poisson_samples
(
lam
,
size
):
rv_numpy_tester
(
poisson
,
lam
,
size
=
size
)
compare_sample_values
(
poisson
,
lam
,
size
=
size
)
def
test_poisson_default_args
():
rv_numpy_tester
(
poisson
)
compare_sample_values
(
poisson
)
@pytest.mark.parametrize
(
...
...
@@ -742,7 +751,7 @@ def test_poisson_default_args():
],
)
def
test_geometric_samples
(
p
,
size
):
rv_numpy_tester
(
geometric
,
p
,
size
=
size
)
compare_sample_values
(
geometric
,
p
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -769,7 +778,7 @@ def test_geometric_samples(p, size):
],
)
def
test_hypergeometric_samples
(
ngood
,
nbad
,
nsample
,
size
):
rv_numpy_tester
(
hypergeometric
,
ngood
,
nbad
,
nsample
,
size
=
size
)
compare_sample_values
(
hypergeometric
,
ngood
,
nbad
,
nsample
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -786,11 +795,13 @@ def test_hypergeometric_samples(ngood, nbad, nsample, size):
],
)
def
test_cauchy_samples
(
loc
,
scale
,
size
):
rv_numpy_tester
(
cauchy
,
loc
,
scale
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"cauchy"
))
compare_sample_values
(
cauchy
,
loc
,
scale
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"cauchy"
)
)
def
test_cauchy_default_args
():
rv_numpy_tester
(
cauchy
,
test_fn
=
stats
.
cauchy
.
rvs
)
compare_sample_values
(
cauchy
,
test_fn
=
stats
.
cauchy
.
rvs
)
@pytest.mark.parametrize
(
...
...
@@ -807,13 +818,13 @@ def test_cauchy_default_args():
],
)
def
test_halfcauchy_samples
(
loc
,
scale
,
size
):
rv_numpy_tester
(
compare_sample_values
(
halfcauchy
,
loc
,
scale
,
size
=
size
,
test_fn
=
fixed_scipy_rvs
(
"halfcauchy"
)
)
def
test_halfcauchy_default_args
():
rv_numpy_tester
(
halfcauchy
,
test_fn
=
stats
.
halfcauchy
.
rvs
)
compare_sample_values
(
halfcauchy
,
test_fn
=
stats
.
halfcauchy
.
rvs
)
@pytest.mark.parametrize
(
...
...
@@ -830,7 +841,7 @@ def test_halfcauchy_default_args():
],
)
def
test_invgamma_samples
(
loc
,
scale
,
size
):
rv_numpy_tester
(
compare_sample_values
(
invgamma
,
loc
,
scale
,
...
...
@@ -855,7 +866,7 @@ def test_invgamma_samples(loc, scale, size):
],
)
def
test_wald_samples
(
mean
,
scale
,
size
):
rv_numpy_tester
(
wald
,
mean
,
scale
,
size
=
size
)
compare_sample_values
(
wald
,
mean
,
scale
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -888,7 +899,7 @@ def test_wald_samples(mean, scale, size):
],
)
def
test_truncexpon_samples
(
b
,
loc
,
scale
,
size
):
rv_numpy_tester
(
compare_sample_values
(
truncexpon
,
b
,
loc
,
...
...
@@ -922,7 +933,7 @@ def test_truncexpon_samples(b, loc, scale, size):
],
)
def
test_bernoulli_samples
(
p
,
size
):
rv_numpy_tester
(
compare_sample_values
(
bernoulli
,
p
,
size
=
size
,
...
...
@@ -958,7 +969,7 @@ def test_bernoulli_samples(p, size):
],
)
def
test_laplace_samples
(
loc
,
scale
,
size
):
rv_numpy_tester
(
laplace
,
loc
,
scale
,
size
=
size
)
compare_sample_values
(
laplace
,
loc
,
scale
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -987,7 +998,7 @@ def test_laplace_samples(loc, scale, size):
],
)
def
test_binomial_samples
(
M
,
p
,
size
):
rv_numpy_tester
(
binomial
,
M
,
p
,
size
=
size
)
compare_sample_values
(
binomial
,
M
,
p
,
size
=
size
)
@pytest.mark.parametrize
(
...
...
@@ -1016,7 +1027,7 @@ def test_binomial_samples(M, p, size):
],
)
def
test_nbinom_samples
(
M
,
p
,
size
):
rv_numpy_tester
(
compare_sample_values
(
nbinom
,
M
,
p
,
...
...
@@ -1057,7 +1068,7 @@ def test_nbinom_samples(M, p, size):
],
)
def
test_betabinom_samples
(
M
,
a
,
p
,
size
):
rv_numpy_tester
(
compare_sample_values
(
betabinom
,
M
,
a
,
...
...
@@ -1114,7 +1125,7 @@ def test_betabinom_samples(M, a, p, size):
)
def
test_multinomial_samples
(
M
,
p
,
size
,
test_fn
):
rng
=
np
.
random
.
default_rng
(
1234
)
rv_numpy_tester
(
compare_sample_values
(
multinomial
,
M
,
p
,
...
...
@@ -1162,7 +1173,7 @@ def test_categorical_samples(p, size, test_fn):
p
=
p
/
p
.
sum
(
axis
=-
1
)
rng
=
np
.
random
.
default_rng
(
232
)
rv_numpy_tester
(
compare_sample_values
(
categorical
,
p
,
size
=
size
,
...
...
@@ -1187,14 +1198,14 @@ def test_randint_samples():
randint
(
10
,
rng
=
shared
(
np
.
random
.
default_rng
()))
rng
=
np
.
random
.
RandomState
(
2313
)
rv_numpy_tester
(
randint
,
10
,
None
,
rng
=
rng
)
rv_numpy_tester
(
randint
,
0
,
1
,
rng
=
rng
)
rv_numpy_tester
(
randint
,
0
,
1
,
size
=
[
3
],
rng
=
rng
)
rv_numpy_tester
(
randint
,
[
0
,
1
,
2
],
5
,
rng
=
rng
)
rv_numpy_tester
(
randint
,
[
0
,
1
,
2
],
5
,
size
=
[
3
,
3
],
rng
=
rng
)
rv_numpy_tester
(
randint
,
[
0
],
[
5
],
size
=
[
1
],
rng
=
rng
)
rv_numpy_tester
(
randint
,
at
.
as_tensor_variable
([
-
1
]),
[
1
],
size
=
[
1
],
rng
=
rng
)
rv_numpy_tester
(
compare_sample_values
(
randint
,
10
,
None
,
rng
=
rng
)
compare_sample_values
(
randint
,
0
,
1
,
rng
=
rng
)
compare_sample_values
(
randint
,
0
,
1
,
size
=
[
3
],
rng
=
rng
)
compare_sample_values
(
randint
,
[
0
,
1
,
2
],
5
,
rng
=
rng
)
compare_sample_values
(
randint
,
[
0
,
1
,
2
],
5
,
size
=
[
3
,
3
],
rng
=
rng
)
compare_sample_values
(
randint
,
[
0
],
[
5
],
size
=
[
1
],
rng
=
rng
)
compare_sample_values
(
randint
,
at
.
as_tensor_variable
([
-
1
]),
[
1
],
size
=
[
1
],
rng
=
rng
)
compare_sample_values
(
randint
,
at
.
as_tensor_variable
([
-
1
]),
[
1
],
...
...
@@ -1209,14 +1220,14 @@ def test_integers_samples():
integers
(
10
,
rng
=
shared
(
np
.
random
.
RandomState
()))
rng
=
np
.
random
.
default_rng
(
2313
)
rv_numpy_tester
(
integers
,
10
,
None
,
rng
=
rng
)
rv_numpy_tester
(
integers
,
0
,
1
,
rng
=
rng
)
rv_numpy_tester
(
integers
,
0
,
1
,
size
=
[
3
],
rng
=
rng
)
rv_numpy_tester
(
integers
,
[
0
,
1
,
2
],
5
,
rng
=
rng
)
rv_numpy_tester
(
integers
,
[
0
,
1
,
2
],
5
,
size
=
[
3
,
3
],
rng
=
rng
)
rv_numpy_tester
(
integers
,
[
0
],
[
5
],
size
=
[
1
],
rng
=
rng
)
rv_numpy_tester
(
integers
,
at
.
as_tensor_variable
([
-
1
]),
[
1
],
size
=
[
1
],
rng
=
rng
)
rv_numpy_tester
(
compare_sample_values
(
integers
,
10
,
None
,
rng
=
rng
)
compare_sample_values
(
integers
,
0
,
1
,
rng
=
rng
)
compare_sample_values
(
integers
,
0
,
1
,
size
=
[
3
],
rng
=
rng
)
compare_sample_values
(
integers
,
[
0
,
1
,
2
],
5
,
rng
=
rng
)
compare_sample_values
(
integers
,
[
0
,
1
,
2
],
5
,
size
=
[
3
,
3
],
rng
=
rng
)
compare_sample_values
(
integers
,
[
0
],
[
5
],
size
=
[
1
],
rng
=
rng
)
compare_sample_values
(
integers
,
at
.
as_tensor_variable
([
-
1
]),
[
1
],
size
=
[
1
],
rng
=
rng
)
compare_sample_values
(
integers
,
at
.
as_tensor_variable
([
-
1
]),
[
1
],
...
...
@@ -1229,28 +1240,30 @@ def test_choice_samples():
with
pytest
.
raises
(
NotImplementedError
):
choice
.
_supp_shape_from_params
(
np
.
asarray
(
5
))
rv_numpy_tester
(
choice
,
np
.
asarray
([
5
]))
rv_numpy_tester
(
choice
,
np
.
array
([
1.0
,
5.0
],
dtype
=
config
.
floatX
))
rv_numpy_tester
(
choice
,
np
.
asarray
([
5
]),
3
)
compare_sample_values
(
choice
,
np
.
asarray
([
5
]))
compare_sample_values
(
choice
,
np
.
array
([
1.0
,
5.0
],
dtype
=
config
.
floatX
))
compare_sample_values
(
choice
,
np
.
asarray
([
5
]),
3
)
with
pytest
.
raises
(
ValueError
):
rv_numpy_tester
(
choice
,
np
.
array
([[
1
,
2
],
[
3
,
4
]]))
compare_sample_values
(
choice
,
np
.
array
([[
1
,
2
],
[
3
,
4
]]))
rv_numpy_tester
(
choice
,
[
1
,
2
,
3
],
1
)
rv_numpy_tester
(
choice
,
[
1
,
2
,
3
],
1
,
p
=
at
.
as_tensor
([
1
/
3.0
,
1
/
3.0
,
1
/
3.0
]))
rv_numpy_tester
(
choice
,
[
1
,
2
,
3
],
(
10
,
2
),
replace
=
True
)
rv_numpy_tester
(
choice
,
at
.
as_tensor_variable
([
1
,
2
,
3
]),
2
,
replace
=
True
)
compare_sample_values
(
choice
,
[
1
,
2
,
3
],
1
)
compare_sample_values
(
choice
,
[
1
,
2
,
3
],
1
,
p
=
at
.
as_tensor
([
1
/
3.0
,
1
/
3.0
,
1
/
3.0
])
)
compare_sample_values
(
choice
,
[
1
,
2
,
3
],
(
10
,
2
),
replace
=
True
)
compare_sample_values
(
choice
,
at
.
as_tensor_variable
([
1
,
2
,
3
]),
2
,
replace
=
True
)
def
test_permutation_samples
():
rv_numpy_tester
(
compare_sample_values
(
permutation
,
np
.
asarray
(
5
),
test_fn
=
lambda
x
,
random_state
=
None
:
random_state
.
permutation
(
x
.
item
()),
)
rv_numpy_tester
(
permutation
,
[
1
,
2
,
3
])
rv_numpy_tester
(
permutation
,
[[
1
,
2
],
[
3
,
4
]])
rv_numpy_tester
(
permutation
,
np
.
array
([
1.0
,
2.0
,
3.0
],
dtype
=
config
.
floatX
))
compare_sample_values
(
permutation
,
[
1
,
2
,
3
])
compare_sample_values
(
permutation
,
[[
1
,
2
],
[
3
,
4
]])
compare_sample_values
(
permutation
,
np
.
array
([
1.0
,
2.0
,
3.0
],
dtype
=
config
.
floatX
))
@config.change_flags
(
compute_test_value
=
"off"
)
...
...
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