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testgroup
pytensor
Commits
e53b9b32
提交
e53b9b32
authored
6月 01, 2021
作者:
Brandon T. Willard
提交者:
Brandon T. Willard
6月 01, 2021
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
Make the optimization database configurable in Mode
上级
66006d27
显示空白字符变更
内嵌
并排
正在显示
6 个修改的文件
包含
65 行增加
和
28 行删除
+65
-28
debugmode.py
aesara/compile/debugmode.py
+2
-1
mode.py
aesara/compile/mode.py
+31
-11
monitormode.py
aesara/compile/monitormode.py
+13
-5
nanguardmode.py
aesara/compile/nanguardmode.py
+2
-1
test_mode.py
tests/compile/test_mode.py
+15
-8
record.py
tests/record.py
+2
-2
没有找到文件。
aesara/compile/debugmode.py
浏览文件 @
e53b9b32
...
@@ -2669,6 +2669,7 @@ class DebugMode(Mode):
...
@@ -2669,6 +2669,7 @@ class DebugMode(Mode):
check_preallocated_output
=
None
,
check_preallocated_output
=
None
,
require_matching_strides
=
None
,
require_matching_strides
=
None
,
linker
=
None
,
linker
=
None
,
db
=
None
,
):
):
"""
"""
If any of these arguments (except optimizer) is not None, it overrides
If any of these arguments (except optimizer) is not None, it overrides
...
@@ -2685,7 +2686,7 @@ class DebugMode(Mode):
...
@@ -2685,7 +2686,7 @@ class DebugMode(Mode):
linker
,
linker
,
)
)
super
()
.
__init__
(
optimizer
=
optimizer
,
linker
=
linker
)
super
()
.
__init__
(
optimizer
=
optimizer
,
linker
=
linker
,
db
=
db
)
if
stability_patience
is
not
None
:
if
stability_patience
is
not
None
:
self
.
stability_patience
=
stability_patience
self
.
stability_patience
=
stability_patience
...
...
aesara/compile/mode.py
浏览文件 @
e53b9b32
...
@@ -5,7 +5,7 @@ WRITEME
...
@@ -5,7 +5,7 @@ WRITEME
import
logging
import
logging
import
warnings
import
warnings
from
typing
import
Tuple
,
Union
from
typing
import
Optional
,
Tuple
,
Union
import
aesara
import
aesara
from
aesara.compile.function.types
import
Supervisor
from
aesara.compile.function.types
import
Supervisor
...
@@ -20,11 +20,12 @@ from aesara.graph.opt import (
...
@@ -20,11 +20,12 @@ from aesara.graph.opt import (
from
aesara.graph.optdb
import
(
from
aesara.graph.optdb
import
(
EquilibriumDB
,
EquilibriumDB
,
LocalGroupDB
,
LocalGroupDB
,
OptimizationDatabase
,
OptimizationQuery
,
OptimizationQuery
,
SequenceDB
,
SequenceDB
,
TopoDB
,
TopoDB
,
)
)
from
aesara.link.basic
import
PerformLinker
from
aesara.link.basic
import
Linker
,
PerformLinker
from
aesara.link.c.basic
import
CLinker
,
OpWiseCLinker
from
aesara.link.c.basic
import
CLinker
,
OpWiseCLinker
from
aesara.link.jax.linker
import
JAXLinker
from
aesara.link.jax.linker
import
JAXLinker
from
aesara.link.numba.linker
import
NumbaLinker
from
aesara.link.numba.linker
import
NumbaLinker
...
@@ -281,12 +282,15 @@ class Mode:
...
@@ -281,12 +282,15 @@ class Mode:
Parameters
Parameters
----------
----------
optimizer
: a structure of type Optimizer
optimizer: a structure of type Optimizer
An Optimizer may simplify the math, put similar computations together,
An Optimizer may simplify the math, put similar computations together,
improve numerical stability and various other improvements.
improve numerical stability and various other improvements.
linker
: a structure of type Linker
linker: a structure of type Linker
A Linker decides which implementations to use (C or Python, for example)
A Linker decides which implementations to use (C or Python, for example)
and how to string them together to perform the computation.
and how to string them together to perform the computation.
db:
The ``OptimizationDatabase`` used by this ``Mode``. Note: This value
is *not* part of a ``Mode`` instance's pickled state.
See Also
See Also
--------
--------
...
@@ -296,12 +300,24 @@ class Mode:
...
@@ -296,12 +300,24 @@ class Mode:
"""
"""
def
__init__
(
self
,
linker
=
None
,
optimizer
=
"default"
):
def
__init__
(
self
,
linker
:
Optional
[
Union
[
str
,
Linker
]]
=
None
,
optimizer
:
Union
[
str
,
OptimizationQuery
]
=
"default"
,
db
:
OptimizationDatabase
=
None
,
):
if
linker
is
None
:
if
linker
is
None
:
linker
=
config
.
linker
linker
=
config
.
linker
if
type
(
optimizer
)
==
str
and
optimizer
==
"default"
:
if
type
(
optimizer
)
==
str
and
optimizer
==
"default"
:
optimizer
=
config
.
optimizer
optimizer
=
config
.
optimizer
Mode
.
__setstate__
(
self
,
(
linker
,
optimizer
))
self
.
__setstate__
((
linker
,
optimizer
))
if
db
is
None
:
global
optdb
self
.
optdb
=
optdb
else
:
self
.
optdb
=
db
# self.provided_optimizer - typically the `optimizer` arg.
# self.provided_optimizer - typically the `optimizer` arg.
# But if the `optimizer` arg is keyword corresponding to a predefined
# But if the `optimizer` arg is keyword corresponding to a predefined
...
@@ -316,7 +332,10 @@ class Mode:
...
@@ -316,7 +332,10 @@ class Mode:
return
(
self
.
provided_linker
,
self
.
provided_optimizer
)
return
(
self
.
provided_linker
,
self
.
provided_optimizer
)
def
__setstate__
(
self
,
state
):
def
__setstate__
(
self
,
state
):
global
optdb
linker
,
optimizer
=
state
linker
,
optimizer
=
state
self
.
optdb
=
optdb
self
.
provided_linker
=
linker
self
.
provided_linker
=
linker
self
.
provided_optimizer
=
optimizer
self
.
provided_optimizer
=
optimizer
if
isinstance
(
linker
,
str
)
or
linker
is
None
:
if
isinstance
(
linker
,
str
)
or
linker
is
None
:
...
@@ -331,15 +350,16 @@ class Mode:
...
@@ -331,15 +350,16 @@ class Mode:
self
.
fn_time
=
0
self
.
fn_time
=
0
def
__str__
(
self
):
def
__str__
(
self
):
return
"{}(linker = {}, optimizer = {})"
.
format
(
return
(
self
.
__class__
.
__name__
,
f
"{self.__class__.__name__}("
self
.
provided_linker
,
f
"linker={self.provided_linker}, "
self
.
provided_optimizer
,
f
"optimizer={self.provided_optimizer}, "
f
"optdb={self.optdb})"
)
)
def
__get_optimizer
(
self
):
def
__get_optimizer
(
self
):
if
isinstance
(
self
.
_optimizer
,
OptimizationQuery
):
if
isinstance
(
self
.
_optimizer
,
OptimizationQuery
):
return
optdb
.
query
(
self
.
_optimizer
)
return
self
.
optdb
.
query
(
self
.
_optimizer
)
else
:
else
:
return
self
.
_optimizer
return
self
.
_optimizer
...
...
aesara/compile/monitormode.py
浏览文件 @
e53b9b32
...
@@ -37,9 +37,9 @@ class MonitorMode(Mode):
...
@@ -37,9 +37,9 @@ class MonitorMode(Mode):
"""
"""
def
__init__
(
self
,
pre_func
=
None
,
post_func
=
None
,
optimizer
=
"default"
,
linker
=
None
):
def
__init__
(
self
.
pre_func
=
pre_func
self
,
pre_func
=
None
,
post_func
=
None
,
optimizer
=
"default"
,
linker
=
None
,
db
=
None
self
.
post_func
=
post_func
):
wrap_linker
=
WrapLinkerMany
([
OpWiseCLinker
()],
[
self
.
eval
])
wrap_linker
=
WrapLinkerMany
([
OpWiseCLinker
()],
[
self
.
eval
])
if
optimizer
==
"default"
:
if
optimizer
==
"default"
:
optimizer
=
config
.
optimizer
optimizer
=
config
.
optimizer
...
@@ -50,14 +50,22 @@ class MonitorMode(Mode):
...
@@ -50,14 +50,22 @@ class MonitorMode(Mode):
linker
,
linker
,
)
)
super
()
.
__init__
(
wrap_linker
,
optimizer
=
optimizer
)
super
()
.
__init__
(
linker
=
wrap_linker
,
optimizer
=
optimizer
,
db
=
db
)
self
.
pre_func
=
pre_func
self
.
post_func
=
post_func
def
__getstate__
(
self
):
def
__getstate__
(
self
):
lnk
,
opt
=
super
()
.
__getstate__
()
lnk
,
opt
=
super
()
.
__getstate__
()
return
(
lnk
,
opt
,
self
.
pre_func
,
self
.
post_func
)
return
(
lnk
,
opt
,
self
.
pre_func
,
self
.
post_func
)
def
__setstate__
(
self
,
state
):
def
__setstate__
(
self
,
state
):
lnk
,
opt
,
pre_func
,
post_func
=
state
lnk
,
opt
,
*
funcs
=
state
if
funcs
:
pre_func
,
post_func
=
funcs
else
:
pre_func
,
post_func
=
None
,
None
self
.
pre_func
=
pre_func
self
.
pre_func
=
pre_func
self
.
post_func
=
post_func
self
.
post_func
=
post_func
super
()
.
__setstate__
((
lnk
,
opt
))
super
()
.
__setstate__
((
lnk
,
opt
))
...
...
aesara/compile/nanguardmode.py
浏览文件 @
e53b9b32
...
@@ -207,6 +207,7 @@ class NanGuardMode(Mode):
...
@@ -207,6 +207,7 @@ class NanGuardMode(Mode):
big_is_error
=
None
,
big_is_error
=
None
,
optimizer
=
"default"
,
optimizer
=
"default"
,
linker
=
None
,
linker
=
None
,
db
=
None
,
):
):
self
.
provided_optimizer
=
optimizer
self
.
provided_optimizer
=
optimizer
if
nan_is_error
is
None
:
if
nan_is_error
is
None
:
...
@@ -298,4 +299,4 @@ class NanGuardMode(Mode):
...
@@ -298,4 +299,4 @@ class NanGuardMode(Mode):
wrap_linker
=
aesara
.
link
.
vm
.
VMLinker
(
wrap_linker
=
aesara
.
link
.
vm
.
VMLinker
(
callback
=
nan_check
,
callback_input
=
nan_check_input
callback
=
nan_check
,
callback_input
=
nan_check_input
)
)
super
()
.
__init__
(
wrap_linker
,
optimizer
=
self
.
provided_optimizer
)
super
()
.
__init__
(
linker
=
wrap_linker
,
optimizer
=
self
.
provided_optimizer
,
db
=
db
)
tests/compile/test_mode.py
浏览文件 @
e53b9b32
import
pytest
from
aesara.compile.function
import
function
from
aesara.compile.function
import
function
from
aesara.compile.mode
import
AddFeatureOptimizer
,
Mode
from
aesara.compile.mode
import
AddFeatureOptimizer
,
Mode
from
aesara.configdefaults
import
config
from
aesara.graph.features
import
NoOutputFromInplace
from
aesara.graph.features
import
NoOutputFromInplace
from
aesara.graph.optdb
import
OptimizationQuery
,
SequenceDB
from
aesara.tensor.math
import
dot
,
tanh
from
aesara.tensor.math
import
dot
,
tanh
from
aesara.tensor.type
import
matrix
from
aesara.tensor.type
import
matrix
@pytest.mark.skipif
(
def
test_Mode_basic
():
not
config
.
cxx
,
reason
=
"G++ not available, so we need to skip this test."
db
=
SequenceDB
()
)
mode
=
Mode
(
linker
=
"py"
,
optimizer
=
OptimizationQuery
(
include
=
None
),
db
=
db
)
assert
mode
.
optdb
is
db
assert
str
(
mode
)
.
startswith
(
"Mode(linker=py, optimizer=OptimizationQuery"
)
def
test_no_output_from_implace
():
def
test_no_output_from_implace
():
x
=
matrix
()
x
=
matrix
()
y
=
matrix
()
y
=
matrix
()
...
@@ -26,7 +30,7 @@ def test_no_output_from_implace():
...
@@ -26,7 +30,7 @@ def test_no_output_from_implace():
# Ensure that the elemwise op that produces the output is not inplace when
# Ensure that the elemwise op that produces the output is not inplace when
# using a mode that includes the optimization
# using a mode that includes the optimization
opt
=
AddFeatureOptimizer
(
NoOutputFromInplace
())
opt
=
AddFeatureOptimizer
(
NoOutputFromInplace
())
mode_opt
=
Mode
(
linker
=
"
cvm
"
,
optimizer
=
"fast_run"
)
.
register
((
opt
,
49.9
))
mode_opt
=
Mode
(
linker
=
"
py
"
,
optimizer
=
"fast_run"
)
.
register
((
opt
,
49.9
))
fct_opt
=
function
([
x
,
y
],
b
,
mode
=
mode_opt
)
fct_opt
=
function
([
x
,
y
],
b
,
mode
=
mode_opt
)
op
=
fct_opt
.
maker
.
fgraph
.
outputs
[
0
]
.
owner
.
op
op
=
fct_opt
.
maker
.
fgraph
.
outputs
[
0
]
.
owner
.
op
...
@@ -35,4 +39,7 @@ def test_no_output_from_implace():
...
@@ -35,4 +39,7 @@ def test_no_output_from_implace():
def
test_including
():
def
test_including
():
mode
=
Mode
(
optimizer
=
"merge"
)
mode
=
Mode
(
optimizer
=
"merge"
)
mode
.
including
(
"fast_compile"
)
assert
set
(
mode
.
_optimizer
.
include
)
==
{
"merge"
}
new_mode
=
mode
.
including
(
"fast_compile"
)
assert
set
(
new_mode
.
_optimizer
.
include
)
==
{
"merge"
,
"fast_compile"
}
tests/record.py
浏览文件 @
e53b9b32
...
@@ -157,7 +157,7 @@ class RecordMode(Mode):
...
@@ -157,7 +157,7 @@ class RecordMode(Mode):
self
.
record
=
record
self
.
record
=
record
self
.
known_fgraphs
=
set
()
self
.
known_fgraphs
=
set
()
def
__init__
(
self
,
record
=
None
,
**
kwargs
):
def
__init__
(
self
,
record
=
None
,
db
=
None
,
**
kwargs
):
"""
"""
Takes either a Record object or the keyword arguments to make one.
Takes either a Record object or the keyword arguments to make one.
...
@@ -252,4 +252,4 @@ class RecordMode(Mode):
...
@@ -252,4 +252,4 @@ class RecordMode(Mode):
linker
=
VMLinker
(
use_cloop
=
bool
(
config
.
cxx
))
linker
=
VMLinker
(
use_cloop
=
bool
(
config
.
cxx
))
wrap_linker
=
WrapLinkerMany
([
linker
],
[
callback
])
wrap_linker
=
WrapLinkerMany
([
linker
],
[
callback
])
super
()
.
__init__
(
wrap_linker
,
optimizer
=
"fast_run"
)
super
()
.
__init__
(
linker
=
wrap_linker
,
optimizer
=
"fast_run"
,
db
=
db
)
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