merge

theano/configdefaults.py

@@ -8,9 +8,11 @@ AddConfigVar('floatX',
         EnumStr('float64', 'float32'), 
         )
 
+#gpu mean let the driver select the gpu. Needed in case of gpu in exclusive mode.
+#gpuX mean use the gpu number X.
 AddConfigVar('device',
         "Default device for computations",
-        EnumStr('cpu', *['gpu%i'%i for i in range(4)])
+        EnumStr('cpu', 'gpu',*['gpu%i'%i for i in range(4)])
         )
 
 # keep the default mode.optimizer==config.optimizer and mode.linker==config.linker!

theano/gof/cmodule.py

@@ -629,7 +629,6 @@ def gcc_module_compile_str(module_name, src_code, location=None, include_dirs=[]
         python_inc = distutils.sysconfig.get_python_inc()
         libname = os.path.basename(python_inc)
 
-
     #DSE Patch 1 for supporting OSX frameworks; add -framework Python 
     if sys.platform=='darwin' :
         preargs.extend(['-undefined','dynamic_lookup'])
@@ -639,8 +638,15 @@ def gcc_module_compile_str(module_name, src_code, location=None, include_dirs=[]
         if python_inc.count('Python.framework')>0 and config.cmodule.mac_framework_link:
             preargs.extend(['-framework','Python'])
 
-    workdir = location
+    # sometimes, the linker cannot find -lpython so we need to tell it 
+    # explicitly where it is located
+    # this returns somepath/lib/python2.5/site-packages
+    python_lib = distutils.sysconfig.get_python_lib()
+    python_lib = os.path.dirname(os.path.dirname(python_lib))
+    if python_lib not in lib_dirs:
+	lib_dirs.append(python_lib)
 
+    workdir = location
 
     cppfilename = os.path.join(location, 'mod.cpp')
     cppfile = file(cppfilename, 'w')

theano/printing.py

@@ -441,12 +441,8 @@ def pydotprint(fct, outfile=os.path.join(config.compiledir,'theano.pydotprint.pn
                 g.add_node(pd.Node(varstr,color='grey'))
             elif var.name or not compact:
                 g.add_edge(pd.Edge(astr,varstr))
-            else:
-                #no name, so we don't make a var ellipse
-                for client in var.clients:
-                    edge = pd.Edge(astr,apply_name(client[0]))
-                    g.add_edge(edge)
-    g.set_simplify(True)
+#            else:
+            #don't add egde here as it is already added from the inputs.
     g.write_png(outfile, prog='dot')
 
     print 'The output file is available at',outfile

theano/sandbox/cuda/__init__.py

@@ -112,7 +112,9 @@ if cuda_available:
 
 def use(device):
     global cuda_enabled, enabled_cuda
-    if device.startswith('gpu'):
+    if device == 'gpu':
+        pass
+    elif device.startswith('gpu'):
         device = int(device[3:])
     elif device == 'cpu':
         device = -1
@@ -120,13 +122,17 @@ def use(device):
         raise ValueError("Invalid device identifier", device)
     if use.device_number is None:
         # No successful call to use() has been made yet
-        if device<0:
+        if device != 'gpu' and device<0:
             return
         if device in [None,""]:
             device=0
-        device=int(device)
         try:
+            if device !='gpu':
                 gpu_init(device)
+            else:
+                #warning To let people see that the gpu will be used.
+                _logger.warn("We let the driver select the gpu device to use")
+                
             handle_shared_float32(True)
             use.device_number = device
             cuda_enabled = True

theano/sandbox/cuda/nvcc_compiler.py

@@ -2,6 +2,7 @@ import sys, os, subprocess, logging
 from theano.gof.cmodule import (std_libs, std_lib_dirs, std_include_dirs, dlimport,
     get_lib_extension)
 from theano import config
+import distutils
 
 _logger=logging.getLogger("theano.sandbox.cuda.nvcc_compiler")
 _logger.setLevel(logging.WARN)
@@ -68,6 +69,14 @@ def nvcc_module_compile_str(module_name, src_code, location=None, include_dirs=[
     if cuda_root:
         lib_dirs.append(os.path.join(cuda_root, 'lib'))
 
+    # sometimes, the linker cannot find -lpython so we need to tell it 
+    # explicitly where it is located
+    # this returns somepath/lib/python2.5/site-packages
+    python_lib = distutils.sysconfig.get_python_lib()
+    python_lib = os.path.dirname(os.path.dirname(python_lib))
+    if python_lib not in lib_dirs:
+        lib_dirs.append(python_lib)
+
     cppfilename = os.path.join(location, 'mod.cu')
     cppfile = file(cppfilename, 'w')
 

theano/sandbox/cuda/tests/test_conv_cuda_ndarray.py

@@ -225,6 +225,7 @@ def get_shapes2(scales_img=(1,1), scales_kern=(1,1), subsample=(1,1), img_stride
     return shapes
 
 def test_valid():
+    raise Exception('One of the modes here causes a segmentation fault!')
     #          img shape,     kern shape, subsample shape
 
     shapes = get_basic_shapes()