numpydoc for theano/sandbox/scan_module/scan_utils.py

theano/sandbox/scan_module/scan_utils.py

 """
-This module provides utility functions for the Scan Op
+This module provides utility functions for the Scan Op.
+
+See scan.py for details on scan.
 
-See scan.py for details on scan
 """
 from __future__ import print_function
 __docformat__ = 'restructedtext en'
@@ -41,8 +42,11 @@ def expand(tensor_var, size):
     ``tensor_var``, namely:
         rval[:d1] = tensor_var
 
-    :param tensor_var: Theano tensor variable
-    :param size: int
+    Parameters
+    ----------
+    tensor_var : Theano tensor variable.
+    size : int
+
     """
     # Corner case that I might use in an optimization
     if size == 0:
@@ -57,7 +61,8 @@ def expand(tensor_var, size):
 def to_list(ls):
     """
     Converts ``ls`` to list if it is a tuple, or wraps ``ls`` into a list if
-    it is not a list already
+    it is not a list already.
+
     """
     if isinstance(ls, (list, tuple)):
         return list(ls)
@@ -70,7 +75,9 @@ class until(object):
     Theano can end on a condition. In order to differentiate this condition
     from the other outputs of scan, this class is used to wrap the condition
     around it.
+
     """
+
     def __init__(self, condition):
         self.condition = tensor.as_tensor_variable(condition)
         assert self.condition.ndim == 0
@@ -78,10 +85,12 @@ class until(object):
 
 def get_updates_and_outputs(ls):
     """
-    Parses the list ``ls`` into outputs and updates. The semantics
-    of ``ls`` is defined by the constructive function of scan.
+    Parses the list ``ls`` into outputs and updates. 
+    
+    The semantics of ``ls`` is defined by the constructive function of scan.
     The elemets of ``ls`` are either a list of expressions representing the
     outputs/states, a dictionary of updates or a condition.
+
     """
     def is_list_outputs(elem):
         if (isinstance(elem, (list, tuple)) and
@@ -150,23 +159,23 @@ def get_updates_and_outputs(ls):
 
 def clone(output, replace=None, strict=True, share_inputs=True):
     """
-    Function that allows replacing subgraphs of a computational
-    graph. It returns a copy of the initial subgraph with the corresponding
-    substitutions.
+    Function that allows replacing subgraphs of a computational graph.
     
-    :type output: Theano Variables (or Theano expressions)
-    :param outputs: Theano expression that represents the computational
-                    graph
+    It returns a copy of the initial subgraph with the corresponding
+    substitutions.
 
-    :type replace: dict
-    :param replace: dictionary describing which subgraphs should be
-                    replaced by what
+    Parameters
+    ----------
+    output : Theano Variables (or Theano expressions)
+        Theano expression that represents the computational graph.
+    replace: dict
+        Dictionary describing which subgraphs should be replaced by what.
+    share_inputs : bool
+        If True, use the same inputs (and shared variables) as the original
+        graph. If False, clone them. Note that cloned shared variables still
+        use the same underlying storage, so they will always have the same
+        value.
 
-    :type share_inputs: bool
-    :param share_inputs: If True, use the same inputs (and shared variables)
-        as the original graph. If False, clone them. Note that cloned
-        shared variables still use the same underlying storage, so they
-        will always have the same value.
     """
     inps, outs, other_stuff = rebuild_collect_shared(output,
                                                      [],
@@ -189,6 +198,7 @@ def canonical_arguments(sequences,
     Mainly it makes sure that arguments are given as lists of dictionaries,
     and that the different fields of of a dictionary are set to default
     value if the user has not provided any.
+
     """
     states_info = to_list(outputs_info)
     parameters = [tensor.as_tensor_variable(x) for x in to_list(non_sequences)]
@@ -303,13 +313,14 @@ def canonical_arguments(sequences,
 
 
 def infer_shape(outs, inputs, input_shapes):
-    '''
+    """
     Compute the shape of the outputs given the shape of the inputs
     of a theano graph.
 
-    We do it this way to avoid compiling the inner function just to get
-    the shape. Changes to ShapeFeature could require changes in this function.
-    '''
+    We do it this way to avoid compiling the inner function just to get the
+    shape. Changes to ShapeFeature could require changes in this function.
+
+    """
     # We use a ShapeFeature because it has all the necessary logic
     # inside.  We don't use the full ShapeFeature interface, but we
     # let it initialize itself with an empty fgraph, otherwise we will
@@ -326,9 +337,10 @@ def infer_shape(outs, inputs, input_shapes):
         shape_feature.set_shape(inp, inp_shp)
 
     def local_traverse(out):
-        '''
+        """
         Go back in the graph, from out, adding computable shapes to shape_of.
-        '''
+
+        """
 
         if out in shape_feature.shape_of:
             # Its shape is already known
@@ -358,14 +370,17 @@ def allocate_memory(T, y_info, y):
     """
     Allocates memory for an output of scan.
 
-    :param T: scalar
-        Variable representing the number of steps scan will run
-    :param y_info: dict
+    Parameters
+    ----------
+    T : scalar
+        Variable representing the number of steps scan will run.
+    y_info : dict
         Dictionary describing the output (more specifically describing shape
-        information for the output
-    :param y: Tensor variable
+        information for the output.
+    y : Tensor variable
         Expression describing the computation resulting in out entry of y.
-        It can be used to infer the shape of y
+        It can be used to infer the shape of y.
+
     """
     if 'shape' in y_info:
         return tensor.zeros([T, ] + list(y_info['shape']),