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testgroup
pytensor
Commits
b6410099
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b6410099
authored
11月 19, 2014
作者:
Frédéric Bastien
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差异文件
Merge pull request #2243 from RoyXue/fix_crash_and_GPU_support
Fix ifelse crash and gpu support
上级
8971b5ca
e318dc8c
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3 个修改的文件
包含
75 行增加
和
19 行删除
+75
-19
profiling.py
theano/compile/profiling.py
+0
-0
test_profiling.py
theano/compile/tests/test_profiling.py
+51
-6
vm.py
theano/gof/vm.py
+24
-13
没有找到文件。
theano/compile/profiling.py
浏览文件 @
b6410099
差异被折叠。
点击展开。
theano/compile/tests/test_profiling.py
浏览文件 @
b6410099
...
@@ -8,6 +8,7 @@ import numpy
...
@@ -8,6 +8,7 @@ import numpy
import
theano
import
theano
import
theano.tensor
as
T
import
theano.tensor
as
T
from
theano.ifelse
import
ifelse
def
test_profiling
():
def
test_profiling
():
...
@@ -20,11 +21,11 @@ def test_profiling():
...
@@ -20,11 +21,11 @@ def test_profiling():
theano
.
config
.
profile_memory
=
True
theano
.
config
.
profile_memory
=
True
theano
.
config
.
profiling
.
min_peak_memory
=
True
theano
.
config
.
profiling
.
min_peak_memory
=
True
x
=
[
T
.
d
vector
(
"val
%
i"
%
i
)
for
i
in
range
(
3
)]
x
=
[
T
.
f
vector
(
"val
%
i"
%
i
)
for
i
in
range
(
3
)]
z
=
[]
z
=
[]
z
+=
[
T
.
outer
(
x
[
i
],
x
[
i
+
1
])
.
sum
(
axis
=
1
)
for
i
in
range
(
len
(
x
)
-
1
)]
z
+=
[
T
.
outer
(
x
[
i
],
x
[
i
+
1
])
.
sum
(
axis
=
1
)
for
i
in
range
(
len
(
x
)
-
1
)]
z
+=
[
x
[
i
]
+
x
[
i
+
1
]
for
i
in
range
(
len
(
x
)
-
1
)]
z
+=
[
x
[
i
]
+
x
[
i
+
1
]
for
i
in
range
(
len
(
x
)
-
1
)]
p
=
theano
.
ProfileStats
(
False
)
p
=
theano
.
ProfileStats
(
False
)
...
@@ -36,7 +37,7 @@ def test_profiling():
...
@@ -36,7 +37,7 @@ def test_profiling():
f
=
theano
.
function
(
x
,
z
,
profile
=
p
,
name
=
"test_profiling"
,
f
=
theano
.
function
(
x
,
z
,
profile
=
p
,
name
=
"test_profiling"
,
mode
=
m
)
mode
=
m
)
inp
=
[
numpy
.
arange
(
1024
)
+
1
for
i
in
range
(
len
(
x
))]
inp
=
[
numpy
.
arange
(
1024
,
dtype
=
'float32'
)
+
1
for
i
in
range
(
len
(
x
))]
output
=
f
(
*
inp
)
output
=
f
(
*
inp
)
buf
=
StringIO
.
StringIO
()
buf
=
StringIO
.
StringIO
()
...
@@ -46,8 +47,16 @@ def test_profiling():
...
@@ -46,8 +47,16 @@ def test_profiling():
the_string
=
buf
.
getvalue
()
the_string
=
buf
.
getvalue
()
lines1
=
[
l
for
l
in
the_string
.
split
(
"
\n
"
)
if
"Max if linker"
in
l
]
lines1
=
[
l
for
l
in
the_string
.
split
(
"
\n
"
)
if
"Max if linker"
in
l
]
lines2
=
[
l
for
l
in
the_string
.
split
(
"
\n
"
)
if
"Minimum peak"
in
l
]
lines2
=
[
l
for
l
in
the_string
.
split
(
"
\n
"
)
if
"Minimum peak"
in
l
]
assert
"Max if linker=cvm(default): 8224KB (16408KB)"
in
the_string
,
(
lines1
,
lines2
)
if
theano
.
config
.
device
==
'cpu'
:
assert
"Minimum peak from all valid apply node order is 8208KB"
in
the_string
,
(
lines1
,
lines2
)
assert
"Max if linker=cvm(default): 4112KB (8204KB)"
in
the_string
,
(
lines1
,
lines2
)
assert
"Minimum peak from all valid apply node order is 4104KB"
in
the_string
,
(
lines1
,
lines2
)
else
:
assert
"Max if linker=cvm(default): 8220KB (8220KB)"
in
the_string
,
(
lines1
,
lines2
)
assert
"Minimum peak from all valid apply node order is 4116KB"
in
the_string
,
(
lines1
,
lines2
)
finally
:
finally
:
theano
.
config
.
profile
=
config1
theano
.
config
.
profile
=
config1
...
@@ -55,5 +64,41 @@ def test_profiling():
...
@@ -55,5 +64,41 @@ def test_profiling():
theano
.
config
.
profiling
.
min_peak_memory
=
config3
theano
.
config
.
profiling
.
min_peak_memory
=
config3
def
test_ifelse
():
config1
=
theano
.
config
.
profile
config2
=
theano
.
config
.
profile_memory
try
:
theano
.
config
.
profile
=
True
theano
.
config
.
profile_memory
=
True
a
,
b
=
T
.
scalars
(
'a'
,
'b'
)
x
,
y
=
T
.
scalars
(
'x'
,
'y'
)
z
=
ifelse
(
T
.
lt
(
a
,
b
),
x
*
2
,
y
*
2
)
p
=
theano
.
ProfileStats
(
False
)
if
theano
.
config
.
mode
in
[
"DebugMode"
,
"DEBUG_MODE"
,
"FAST_COMPILE"
]:
m
=
"FAST_RUN"
else
:
m
=
None
f_ifelse
=
theano
.
function
([
a
,
b
,
x
,
y
],
z
,
profile
=
p
,
name
=
"test_ifelse"
,
mode
=
m
)
val1
=
0.
val2
=
1.
big_mat1
=
10
big_mat2
=
11
out
=
f_ifelse
(
val1
,
val2
,
big_mat1
,
big_mat2
)
finally
:
theano
.
config
.
profile
=
config1
theano
.
config
.
profile_memory
=
config2
if
__name__
==
'__main__'
:
if
__name__
==
'__main__'
:
test_profiling
()
test_profiling
()
test_ifelse
()
theano/gof/vm.py
浏览文件 @
b6410099
...
@@ -56,6 +56,7 @@ raise_with_op = link.raise_with_op
...
@@ -56,6 +56,7 @@ raise_with_op = link.raise_with_op
class
VM
(
object
):
class
VM
(
object
):
"""
"""
A VM object's __call__ method evaluates a Theano program.
A VM object's __call__ method evaluates a Theano program.
...
@@ -83,6 +84,7 @@ class VM(object):
...
@@ -83,6 +84,7 @@ class VM(object):
storage. False means it *must not* repeat that feedback.
storage. False means it *must not* repeat that feedback.
"""
"""
def
__init__
(
self
,
nodes
,
thunks
,
pre_call_clear
):
def
__init__
(
self
,
nodes
,
thunks
,
pre_call_clear
):
"""
"""
Allocate a virtual machine.
Allocate a virtual machine.
...
@@ -159,10 +161,12 @@ class VM(object):
...
@@ -159,10 +161,12 @@ class VM(object):
class
Loop
(
VM
):
class
Loop
(
VM
):
"""
"""
Unconditional start-to-finish program execution in Python.
Unconditional start-to-finish program execution in Python.
No garbage collection is allowed on intermediate results.
No garbage collection is allowed on intermediate results.
"""
"""
def
__call__
(
self
):
def
__call__
(
self
):
if
self
.
time_thunks
:
if
self
.
time_thunks
:
for
cont
in
self
.
pre_call_clear
:
for
cont
in
self
.
pre_call_clear
:
...
@@ -188,10 +192,12 @@ class Loop(VM):
...
@@ -188,10 +192,12 @@ class Loop(VM):
class
LoopGC
(
VM
):
class
LoopGC
(
VM
):
"""
"""
Unconditional start-to-finish program execution in Python.
Unconditional start-to-finish program execution in Python.
Garbage collection is possible on intermediate results.
Garbage collection is possible on intermediate results.
"""
"""
def
__init__
(
self
,
nodes
,
thunks
,
pre_call_clear
,
post_thunk_clear
):
def
__init__
(
self
,
nodes
,
thunks
,
pre_call_clear
,
post_thunk_clear
):
super
(
LoopGC
,
self
)
.
__init__
(
nodes
,
thunks
,
pre_call_clear
)
super
(
LoopGC
,
self
)
.
__init__
(
nodes
,
thunks
,
pre_call_clear
)
self
.
post_thunk_clear
=
post_thunk_clear
self
.
post_thunk_clear
=
post_thunk_clear
...
@@ -231,6 +237,7 @@ class LoopGC(VM):
...
@@ -231,6 +237,7 @@ class LoopGC(VM):
class
Stack
(
VM
):
class
Stack
(
VM
):
"""
"""
Finish-to-start evalution order of thunks.
Finish-to-start evalution order of thunks.
...
@@ -340,7 +347,7 @@ class Stack(VM):
...
@@ -340,7 +347,7 @@ class Stack(VM):
apply_stack
=
list
(
self
.
base_apply_stack
)
apply_stack
=
list
(
self
.
base_apply_stack
)
last_apply_stack_len
=
-
1
last_apply_stack_len
=
-
1
#This record all function inputs/shared varibles and constants
#
This record all function inputs/shared varibles and constants
for
var
,
data
in
self
.
storage_map
.
iteritems
():
for
var
,
data
in
self
.
storage_map
.
iteritems
():
if
data
[
0
]
is
None
:
if
data
[
0
]
is
None
:
continue
continue
...
@@ -396,7 +403,7 @@ class Stack(VM):
...
@@ -396,7 +403,7 @@ class Stack(VM):
current_idx
=
self
.
node_idx
[
current_apply
]
current_idx
=
self
.
node_idx
[
current_apply
]
self
.
call_counts
[
current_idx
]
+=
1
self
.
call_counts
[
current_idx
]
+=
1
self
.
call_times
[
current_idx
]
+=
dt
self
.
call_times
[
current_idx
]
+=
dt
#
#
Computing the memory footprint of the the op
# Computing the memory footprint of the the op
# ?? What about inplace .. if the op is inplace
# ?? What about inplace .. if the op is inplace
# you don't actually ask for more memory!
# you don't actually ask for more memory!
for
(
idx
,
o
)
in
enumerate
(
for
(
idx
,
o
)
in
enumerate
(
...
@@ -436,15 +443,16 @@ class Stack(VM):
...
@@ -436,15 +443,16 @@ class Stack(VM):
if
all
(
compute_map
[
v
][
0
]
if
all
(
compute_map
[
v
][
0
]
for
v
in
dependencies
[
i
]):
for
v
in
dependencies
[
i
]):
storage_map
[
i
][
0
]
=
None
storage_map
[
i
][
0
]
=
None
input_index
.
append
(
current_apply
.
inputs
.
index
(
i
))
input_index
.
append
(
current_apply
.
inputs
.
index
(
i
))
#DO NOT set compute_map to 0
#
DO NOT set compute_map to 0
#If values become False and the
#
If values become False and the
#current_apply is still in the
#current_apply is still in the
#stack, this will cause it to be
#
stack, this will cause it to be
#recomputed! This can cause wrong value
#
recomputed! This can cause wrong value
#with some combination of inplace op.
#
with some combination of inplace op.
compute_map
[
i
][
0
]
=
2
compute_map
[
i
][
0
]
=
2
if
(
config
.
warn
.
vm_gc_bug
and
if
(
config
.
warn
.
vm_gc_bug
and
current_apply
in
apply_stack
and
current_apply
in
apply_stack
and
...
@@ -456,7 +464,8 @@ class Stack(VM):
...
@@ -456,7 +464,8 @@ class Stack(VM):
" only in the development version between July 5th 2012"
" only in the development version between July 5th 2012"
" and July 30th 2012. This was not in a released version."
" and July 30th 2012. This was not in a released version."
" The bug was affecting this script."
,
" The bug was affecting this script."
,
#The stack level is not good when inside a Scan.
# The stack level is not good when
# inside a Scan.
stacklevel
=
3
stacklevel
=
3
)
)
self
.
node_cleared_order
.
append
(
input_index
)
self
.
node_cleared_order
.
append
(
input_index
)
...
@@ -468,7 +477,6 @@ class Stack(VM):
...
@@ -468,7 +477,6 @@ class Stack(VM):
for
inp
in
current_deps
for
inp
in
current_deps
if
inp
.
owner
)
if
inp
.
owner
)
elif
not
computed_outs
:
elif
not
computed_outs
:
#
#
# stack loop: Lazy Evaluation Case
# stack loop: Lazy Evaluation Case
...
@@ -531,9 +539,10 @@ class Stack(VM):
...
@@ -531,9 +539,10 @@ class Stack(VM):
break
break
if
empty_storage_map
:
if
empty_storage_map
:
storage_map
[
i
][
0
]
=
None
storage_map
[
i
][
0
]
=
None
input_index
.
append
(
current_apply
.
inputs
.
index
(
i
))
input_index
.
append
(
#See the not lazy gc code for explanations
current_apply
.
inputs
.
index
(
i
))
#of compute_map change
# See the not lazy gc code for explanations
# of compute_map change
compute_map
[
i
][
0
]
=
2
compute_map
[
i
][
0
]
=
2
self
.
node_cleared_order
.
append
(
input_index
)
self
.
node_cleared_order
.
append
(
input_index
)
...
@@ -560,6 +569,7 @@ try:
...
@@ -560,6 +569,7 @@ try:
import
lazylinker_c
import
lazylinker_c
class
CVM
(
lazylinker_c
.
CLazyLinker
,
VM
):
class
CVM
(
lazylinker_c
.
CLazyLinker
,
VM
):
def
__init__
(
self
,
*
args
,
**
kwargs
):
def
__init__
(
self
,
*
args
,
**
kwargs
):
lazylinker_c
.
CLazyLinker
.
__init__
(
self
,
*
args
,
**
kwargs
)
lazylinker_c
.
CLazyLinker
.
__init__
(
self
,
*
args
,
**
kwargs
)
# skip VM.__init__
# skip VM.__init__
...
@@ -576,6 +586,7 @@ except (OSError, theano.gof.cmodule.MissingGXX), e:
...
@@ -576,6 +586,7 @@ except (OSError, theano.gof.cmodule.MissingGXX), e:
class
VM_Linker
(
link
.
LocalLinker
):
class
VM_Linker
(
link
.
LocalLinker
):
"""
"""
Class that satisfies the Linker interface by acting as a VM factory.
Class that satisfies the Linker interface by acting as a VM factory.
"""
"""
...
...
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