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pytensor
Commits
b2be84e2
提交
b2be84e2
authored
11月 24, 2011
作者:
Frederic
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
pep8 fix.
上级
bfecc533
隐藏空白字符变更
内嵌
并排
正在显示
1 个修改的文件
包含
206 行增加
和
164 行删除
+206
-164
test_neighbours.py
theano/sandbox/test_neighbours.py
+206
-164
没有找到文件。
theano/sandbox/test_neighbours.py
浏览文件 @
b2be84e2
import
numpy
import
numpy
import
numpy.random
import
theano
import
theano
from
theano
import
shared
,
function
from
theano
import
shared
,
function
import
theano.tensor
as
T
import
theano.tensor
as
T
from
neighbours
import
images2neibs
,
neibs2images
,
Images2Neibs
,
GpuImages2Neibs
from
neighbours
import
(
images2neibs
,
neibs2images
,
Images2Neibs
,
GpuImages2Neibs
)
# Skip test if cuda_ndarray is not available.
# Skip test if cuda_ndarray is not available.
from
nose.plugins.skip
import
SkipTest
from
nose.plugins.skip
import
SkipTest
import
theano.sandbox.cuda
as
cuda
import
theano.sandbox.cuda
as
cuda
from
theano.tests
import
unittest_tools
from
theano.tests
import
unittest_tools
if
theano
.
config
.
mode
==
'FAST_COMPILE'
:
if
theano
.
config
.
mode
==
'FAST_COMPILE'
:
mode_with_gpu
=
theano
.
compile
.
mode
.
get_mode
(
'FAST_RUN'
)
.
including
(
'gpu'
)
mode_with_gpu
=
theano
.
compile
.
mode
.
get_mode
(
'FAST_RUN'
)
.
including
(
'gpu'
)
mode_without_gpu
=
theano
.
compile
.
mode
.
get_mode
(
'FAST_RUN'
)
.
excluding
(
'gpu'
)
mode_without_gpu
=
theano
.
compile
.
mode
.
get_mode
(
'FAST_RUN'
)
.
excluding
(
'gpu'
)
else
:
else
:
mode_with_gpu
=
theano
.
compile
.
mode
.
get_default_mode
()
.
including
(
'gpu'
)
mode_with_gpu
=
theano
.
compile
.
mode
.
get_default_mode
()
.
including
(
'gpu'
)
mode_without_gpu
=
theano
.
compile
.
mode
.
get_default_mode
()
.
excluding
(
'gpu'
)
mode_without_gpu
=
theano
.
compile
.
mode
.
get_default_mode
()
.
excluding
(
'gpu'
)
def
test_neibs
():
def
test_neibs
():
shape
=
(
100
,
40
,
18
,
18
)
shape
=
(
100
,
40
,
18
,
18
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
2
,
2
))
#(array((2,2), dtype='float32'
))
neib_shape
=
T
.
as_tensor_variable
((
2
,
2
))
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_without_gpu
)
#print images.get_value(borrow=True)
#print images.get_value(borrow=True)
neibs
=
f
()
neibs
=
f
()
#print neibs
#print neibs
g
=
function
([],
neibs2images
(
neibs
,
neib_shape
,
images
.
shape
),
mode
=
mode_without_gpu
)
g
=
function
([],
neibs2images
(
neibs
,
neib_shape
,
images
.
shape
),
mode
=
mode_without_gpu
)
#print g()
#print g()
assert
numpy
.
allclose
(
images
.
get_value
(
borrow
=
True
),
g
())
assert
numpy
.
allclose
(
images
.
get_value
(
borrow
=
True
),
g
())
def
test_neibs_bad_shape
():
def
test_neibs_bad_shape
():
shape
=
(
2
,
3
,
10
,
10
)
shape
=
(
2
,
3
,
10
,
10
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
2
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
2
))
try
:
try
:
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_without_gpu
)
neibs
=
f
()
neibs
=
f
()
#print neibs
#print neibs
assert
False
,
"An error was expected"
assert
False
,
"An error was expected"
except
TypeError
:
except
TypeError
:
pass
pass
shape
=
(
2
,
3
,
10
,
10
)
shape
=
(
2
,
3
,
10
,
10
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
2
,
3
))
neib_shape
=
T
.
as_tensor_variable
((
2
,
3
))
try
:
try
:
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_without_gpu
)
neibs
=
f
()
neibs
=
f
()
#print neibs
#print neibs
assert
False
,
"An error was expected"
assert
False
,
"An error was expected"
except
TypeError
:
except
TypeError
:
pass
pass
def
test_neibs_bad_shape_warp_centered
():
def
test_neibs_bad_shape_warp_centered
():
shape
=
(
2
,
3
,
10
,
10
)
shape
=
(
2
,
3
,
10
,
10
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
2
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
2
))
try
:
try
:
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
neibs
=
f
()
neibs
=
f
()
#print neibs
#print neibs
assert
False
,
"An error was expected"
assert
False
,
"An error was expected"
except
TypeError
:
except
TypeError
:
pass
pass
shape
=
(
2
,
3
,
10
,
10
)
shape
=
(
2
,
3
,
10
,
10
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
2
,
3
))
neib_shape
=
T
.
as_tensor_variable
((
2
,
3
))
try
:
try
:
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
neibs
=
f
()
neibs
=
f
()
#print neibs
#print neibs
assert
False
,
"An error was expected"
assert
False
,
"An error was expected"
except
TypeError
:
except
TypeError
:
pass
pass
shape
=
(
2
,
3
,
2
,
3
)
shape
=
(
2
,
3
,
2
,
3
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
try
:
try
:
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
neibs
=
f
()
neibs
=
f
()
#print neibs
#print neibs
assert
False
,
"An error was expected"
assert
False
,
"An error was expected"
except
TypeError
:
except
TypeError
:
pass
pass
shape
=
(
2
,
3
,
3
,
2
)
shape
=
(
2
,
3
,
3
,
2
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
try
:
try
:
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
neibs
=
f
()
neibs
=
f
()
#print neibs
#print neibs
assert
False
,
"An error was expected"
assert
False
,
"An error was expected"
except
TypeError
,
e
:
except
TypeError
,
e
:
pass
pass
shape
=
(
2
,
3
,
3
,
3
)
shape
=
(
2
,
3
,
3
,
3
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
),
mode
=
mode_without_gpu
)
neibs
=
f
()
neibs
=
f
()
#print neibs
#print neibs
def
test_neibs_manual
():
def
test_neibs_manual
():
shape
=
(
2
,
3
,
4
,
4
)
shape
=
(
2
,
3
,
4
,
4
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
2
,
2
))
neib_shape
=
T
.
as_tensor_variable
((
2
,
2
))
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_without_gpu
)
...
@@ -148,29 +165,34 @@ def test_neibs_manual():
...
@@ -148,29 +165,34 @@ def test_neibs_manual():
[
82
,
83
,
86
,
87
],
[
82
,
83
,
86
,
87
],
[
88
,
89
,
92
,
93
],
[
88
,
89
,
92
,
93
],
[
90
,
91
,
94
,
95
]])
[
90
,
91
,
94
,
95
]])
g
=
function
([],
neibs2images
(
neibs
,
neib_shape
,
images
.
shape
),
mode
=
mode_without_gpu
)
g
=
function
([],
neibs2images
(
neibs
,
neib_shape
,
images
.
shape
),
mode
=
mode_without_gpu
)
#print g()
#print g()
assert
numpy
.
allclose
(
images
.
get_value
(
borrow
=
True
),
g
())
assert
numpy
.
allclose
(
images
.
get_value
(
borrow
=
True
),
g
())
def
test_neibs_step_manual
():
def
test_neibs_step_manual
():
shape
=
(
2
,
3
,
5
,
5
)
shape
=
(
2
,
3
,
5
,
5
)
images
=
shared
(
numpy
.
asarray
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
),
dtype
=
'float32'
))
images
=
shared
(
numpy
.
asarray
(
numpy
.
arange
(
numpy
.
prod
(
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
shape
))
.
reshape
(
shape
),
dtype
=
'float32'
))
neib_step
=
T
.
as_tensor_variable
((
2
,
2
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
neib_step
=
T
.
as_tensor_variable
((
2
,
2
))
modes
=
[
mode_without_gpu
]
modes
=
[
mode_without_gpu
]
if
cuda
.
cuda_available
:
if
cuda
.
cuda_available
:
modes
.
append
(
mode_with_gpu
)
modes
.
append
(
mode_with_gpu
)
for
mode_idx
,
mode
in
enumerate
(
modes
):
for
mode_idx
,
mode
in
enumerate
(
modes
):
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
neib_step
),
mode
=
mode
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
neib_step
),
mode
=
mode
)
#print images.get_value(borrow=True)
#print images.get_value(borrow=True)
neibs
=
f
()
neibs
=
f
()
if
mode_idx
==
0
:
if
mode_idx
==
0
:
assert
Images2Neibs
in
[
type
(
node
.
op
)
for
node
in
f
.
maker
.
env
.
toposort
()]
assert
Images2Neibs
in
[
type
(
node
.
op
)
elif
mode_idx
==
1
:
for
node
in
f
.
maker
.
env
.
toposort
()]
assert
GpuImages2Neibs
in
[
type
(
node
.
op
)
for
node
in
f
.
maker
.
env
.
toposort
()]
elif
mode_idx
==
1
:
assert
GpuImages2Neibs
in
[
type
(
node
.
op
)
for
node
in
f
.
maker
.
env
.
toposort
()]
assert
numpy
.
allclose
(
neibs
,
assert
numpy
.
allclose
(
neibs
,
[[
0
,
1
,
2
,
5
,
6
,
7
,
10
,
11
,
12
],
[[
0
,
1
,
2
,
5
,
6
,
7
,
10
,
11
,
12
],
...
@@ -202,6 +224,7 @@ def test_neibs_step_manual():
...
@@ -202,6 +224,7 @@ def test_neibs_step_manual():
#print g()
#print g()
#assert numpy.allclose(images.get_value(borrow=True),g())
#assert numpy.allclose(images.get_value(borrow=True),g())
def
test_neibs_wrap_centered_step_manual
():
def
test_neibs_wrap_centered_step_manual
():
modes
=
[
mode_without_gpu
]
modes
=
[
mode_without_gpu
]
...
@@ -221,57 +244,63 @@ def test_neibs_wrap_centered_step_manual():
...
@@ -221,57 +244,63 @@ def test_neibs_wrap_centered_step_manual():
[
22
,
23
,
24
,
2
,
3
,
4
,
7
,
8
,
9
],
[
22
,
23
,
24
,
2
,
3
,
4
,
7
,
8
,
9
],
[
14
,
10
,
11
,
19
,
15
,
16
,
24
,
20
,
21
],
[
14
,
10
,
11
,
19
,
15
,
16
,
24
,
20
,
21
],
[
12
,
13
,
14
,
17
,
18
,
19
,
22
,
23
,
24
]]
[
12
,
13
,
14
,
17
,
18
,
19
,
22
,
23
,
24
]]
expected3
=
[[
19
,
15
,
16
,
24
,
20
,
21
,
4
,
0
,
1
,
9
,
5
,
6
,
14
,
10
,
11
],
expected3
=
[[
19
,
15
,
16
,
24
,
20
,
21
,
4
,
0
,
1
,
9
,
5
,
6
,
14
,
10
,
11
],
[
17
,
18
,
19
,
22
,
23
,
24
,
2
,
3
,
4
,
7
,
8
,
9
,
12
,
13
,
14
],
[
17
,
18
,
19
,
22
,
23
,
24
,
2
,
3
,
4
,
7
,
8
,
9
,
12
,
13
,
14
],
[
9
,
5
,
6
,
14
,
10
,
11
,
19
,
15
,
16
,
24
,
20
,
21
,
4
,
0
,
1
],
[
9
,
5
,
6
,
14
,
10
,
11
,
19
,
15
,
16
,
24
,
20
,
21
,
4
,
0
,
1
],
[
7
,
8
,
9
,
12
,
13
,
14
,
17
,
18
,
19
,
22
,
23
,
24
,
2
,
3
,
4
]]
[
7
,
8
,
9
,
12
,
13
,
14
,
17
,
18
,
19
,
22
,
23
,
24
,
2
,
3
,
4
]]
expected4
=
[[
23
,
24
,
20
,
21
,
22
,
3
,
4
,
0
,
1
,
2
,
8
,
9
,
5
,
6
,
7
],
expected4
=
[[
23
,
24
,
20
,
21
,
22
,
3
,
4
,
0
,
1
,
2
,
8
,
9
,
5
,
6
,
7
],
[
21
,
22
,
23
,
24
,
20
,
1
,
2
,
3
,
4
,
0
,
6
,
7
,
8
,
9
,
5
],
[
21
,
22
,
23
,
24
,
20
,
1
,
2
,
3
,
4
,
0
,
6
,
7
,
8
,
9
,
5
],
[
13
,
14
,
10
,
11
,
12
,
18
,
19
,
15
,
16
,
17
,
23
,
24
,
20
,
21
,
22
],
[
13
,
14
,
10
,
11
,
12
,
18
,
19
,
15
,
16
,
17
,
23
,
24
,
20
,
21
,
22
],
[
11
,
12
,
13
,
14
,
10
,
16
,
17
,
18
,
19
,
15
,
21
,
22
,
23
,
24
,
20
]]
[
11
,
12
,
13
,
14
,
10
,
16
,
17
,
18
,
19
,
15
,
21
,
22
,
23
,
24
,
20
]]
expected5
=
[[
24
,
20
,
21
,
4
,
0
,
1
,
9
,
5
,
6
],
expected5
=
[[
24
,
20
,
21
,
4
,
0
,
1
,
9
,
5
,
6
],
[
22
,
23
,
24
,
2
,
3
,
4
,
7
,
8
,
9
],
[
22
,
23
,
24
,
2
,
3
,
4
,
7
,
8
,
9
],
[
9
,
5
,
6
,
14
,
10
,
11
,
19
,
15
,
16
],
[
9
,
5
,
6
,
14
,
10
,
11
,
19
,
15
,
16
],
[
7
,
8
,
9
,
12
,
13
,
14
,
17
,
18
,
19
],
[
7
,
8
,
9
,
12
,
13
,
14
,
17
,
18
,
19
],
[
19
,
15
,
16
,
24
,
20
,
21
,
4
,
0
,
1
],
[
19
,
15
,
16
,
24
,
20
,
21
,
4
,
0
,
1
],
[
17
,
18
,
19
,
22
,
23
,
24
,
2
,
3
,
4
]]
[
17
,
18
,
19
,
22
,
23
,
24
,
2
,
3
,
4
]]
expected6
=
[[
24
,
20
,
21
,
4
,
0
,
1
,
9
,
5
,
6
],
expected6
=
[[
24
,
20
,
21
,
4
,
0
,
1
,
9
,
5
,
6
],
[
21
,
22
,
23
,
1
,
2
,
3
,
6
,
7
,
8
],
[
21
,
22
,
23
,
1
,
2
,
3
,
6
,
7
,
8
],
[
23
,
24
,
20
,
3
,
4
,
0
,
8
,
9
,
5
],
[
23
,
24
,
20
,
3
,
4
,
0
,
8
,
9
,
5
],
[
14
,
10
,
11
,
19
,
15
,
16
,
24
,
20
,
21
],
[
14
,
10
,
11
,
19
,
15
,
16
,
24
,
20
,
21
],
[
11
,
12
,
13
,
16
,
17
,
18
,
21
,
22
,
23
],
[
11
,
12
,
13
,
16
,
17
,
18
,
21
,
22
,
23
],
[
13
,
14
,
10
,
18
,
19
,
15
,
23
,
24
,
20
]]
[
13
,
14
,
10
,
18
,
19
,
15
,
23
,
24
,
20
]]
#TODO test discontinous image
#TODO test discontinous image
for
shp_idx
,
(
shape
,
neib_shape
,
neib_step
,
expected
)
in
enumerate
([
for
shp_idx
,
(
shape
,
neib_shape
,
neib_step
,
expected
)
in
enumerate
([
[(
7
,
8
,
5
,
5
),(
3
,
3
),(
2
,
2
),
expected1
],
[(
7
,
8
,
5
,
5
),
(
3
,
3
),
(
2
,
2
),
expected1
],
[(
7
,
8
,
5
,
5
),(
3
,
3
),(
3
,
3
),
expected2
],
[(
7
,
8
,
5
,
5
),
(
3
,
3
),
(
3
,
3
),
expected2
],
[(
7
,
8
,
5
,
5
),(
5
,
3
),(
3
,
3
),
expected3
],
[(
7
,
8
,
5
,
5
),
(
5
,
3
),
(
3
,
3
),
expected3
],
[(
7
,
8
,
5
,
5
),(
3
,
5
),(
3
,
3
),
expected4
],
[(
7
,
8
,
5
,
5
),
(
3
,
5
),
(
3
,
3
),
expected4
],
[(
80
,
90
,
5
,
5
),(
3
,
3
),(
2
,
3
),
expected5
],
[(
80
,
90
,
5
,
5
),
(
3
,
3
),
(
2
,
3
),
expected5
],
[(
1025
,
9
,
5
,
5
),(
3
,
3
),(
3
,
2
),
expected6
],
[(
1025
,
9
,
5
,
5
),
(
3
,
3
),
(
3
,
2
),
expected6
],
[(
1
,
1
,
5
,
1035
),(
3
,
3
),(
3
,
3
),
None
],
[(
1
,
1
,
5
,
1035
),
(
3
,
3
),
(
3
,
3
),
None
],
[(
1
,
1
,
1045
,
5
),(
3
,
3
),(
3
,
3
),
None
],
[(
1
,
1
,
1045
,
5
),
(
3
,
3
),
(
3
,
3
),
None
],
]):
]):
images
=
shared
(
numpy
.
asarray
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
),
dtype
=
'float32'
))
images
=
shared
(
numpy
.
asarray
(
numpy
.
arange
(
numpy
.
prod
(
shape
))
.
reshape
(
shape
),
dtype
=
'float32'
))
neib_shape
=
T
.
as_tensor_variable
(
neib_shape
)
neib_shape
=
T
.
as_tensor_variable
(
neib_shape
)
neib_step
=
T
.
as_tensor_variable
(
neib_step
)
neib_step
=
T
.
as_tensor_variable
(
neib_step
)
expected
=
numpy
.
asarray
(
expected
)
expected
=
numpy
.
asarray
(
expected
)
for
mode_idx
,
mode
in
enumerate
(
modes
):
for
mode_idx
,
mode
in
enumerate
(
modes
):
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
neib_step
,
mode
=
"wrap_centered"
),
mode
=
mode
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
neib_step
,
mode
=
"wrap_centered"
),
mode
=
mode
)
neibs
=
f
()
neibs
=
f
()
if
expected
.
size
>
1
:
if
expected
.
size
>
1
:
for
i
in
range
(
shape
[
0
]
*
shape
[
1
]):
for
i
in
range
(
shape
[
0
]
*
shape
[
1
]):
assert
numpy
.
allclose
(
neibs
[
i
*
expected
.
shape
[
0
]:(
i
+
1
)
*
expected
.
shape
[
0
],:],
expected
+
25
*
i
),
mode_idx
assert
numpy
.
allclose
(
neibs
[
i
*
expected
.
shape
[
0
]:
(
i
+
1
)
*
expected
.
shape
[
0
],
:],
expected
+
25
*
i
),
mode_idx
if
mode_idx
==
0
:
if
mode_idx
==
0
:
assert
Images2Neibs
in
[
type
(
node
.
op
)
for
node
in
f
.
maker
.
env
.
toposort
()]
assert
Images2Neibs
in
[
type
(
node
.
op
)
elif
mode_idx
==
1
:
for
node
in
f
.
maker
.
env
.
toposort
()]
assert
GpuImages2Neibs
in
[
type
(
node
.
op
)
for
node
in
f
.
maker
.
env
.
toposort
()]
elif
mode_idx
==
1
:
assert
GpuImages2Neibs
in
[
type
(
node
.
op
)
for
node
in
f
.
maker
.
env
.
toposort
()]
#g = function([], neibs2images(neibs, neib_shape, images.shape), mode=mode_without_gpu)
#g = function([], neibs2images(neibs, neib_shape, images.shape), mode=mode_without_gpu)
...
@@ -281,61 +310,64 @@ def test_neibs_wrap_centered_step_manual():
...
@@ -281,61 +310,64 @@ def test_neibs_wrap_centered_step_manual():
def
test_neibs_gpu
():
def
test_neibs_gpu
():
if
cuda
.
cuda_available
==
False
:
if
cuda
.
cuda_available
==
False
:
raise
SkipTest
(
'Optional package cuda disabled'
)
raise
SkipTest
(
'Optional package cuda disabled'
)
for
shape
,
pshape
in
[((
100
,
40
,
18
,
18
),(
2
,
2
)),
for
shape
,
pshape
in
[((
100
,
40
,
18
,
18
),
(
2
,
2
)),
((
100
,
40
,
6
,
18
),(
3
,
2
)),
((
100
,
40
,
6
,
18
),
(
3
,
2
)),
((
10
,
40
,
66
,
66
),(
33
,
33
)),
((
10
,
40
,
66
,
66
),
(
33
,
33
)),
((
10
,
40
,
68
,
66
),(
34
,
33
))
((
10
,
40
,
68
,
66
),
(
34
,
33
))
]:
]:
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
(
pshape
)
neib_shape
=
T
.
as_tensor_variable
(
pshape
)
from
theano.sandbox.cuda.basic_ops
import
gpu_from_host
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
f
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_with_gpu
)
mode
=
mode_with_gpu
)
f_gpu
=
function
([],
images2neibs
(
images
,
neib_shape
),
f_gpu
=
function
([],
images2neibs
(
images
,
neib_shape
),
mode
=
mode_with_gpu
)
mode
=
mode_with_gpu
)
assert
any
([
isinstance
(
node
.
op
,
GpuImages2Neibs
)
for
node
in
f_gpu
.
maker
.
env
.
toposort
()])
assert
any
([
isinstance
(
node
.
op
,
GpuImages2Neibs
)
for
node
in
f_gpu
.
maker
.
env
.
toposort
()])
#print images.get_value(borrow=True)
#print images.get_value(borrow=True)
neibs
=
numpy
.
asarray
(
f_gpu
())
neibs
=
numpy
.
asarray
(
f_gpu
())
assert
numpy
.
allclose
(
neibs
,
f
())
assert
numpy
.
allclose
(
neibs
,
f
())
#print neibs
#print neibs
g
=
function
([],
neibs2images
(
neibs
,
neib_shape
,
images
.
shape
),
mode
=
mode_with_gpu
)
g
=
function
([],
neibs2images
(
neibs
,
neib_shape
,
images
.
shape
),
assert
any
([
isinstance
(
node
.
op
,
GpuImages2Neibs
)
for
node
in
f
.
maker
.
env
.
toposort
()])
mode
=
mode_with_gpu
)
assert
any
([
isinstance
(
node
.
op
,
GpuImages2Neibs
)
for
node
in
f
.
maker
.
env
.
toposort
()])
#print numpy.asarray(g())
#print numpy.asarray(g())
assert
numpy
.
allclose
(
images
.
get_value
(
borrow
=
True
),
g
())
assert
numpy
.
allclose
(
images
.
get_value
(
borrow
=
True
),
g
())
def
speed_neibs
():
def
speed_neibs
():
shape
=
(
100
,
40
,
18
,
18
)
shape
=
(
100
,
40
,
18
,
18
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
),
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
dtype
=
'float32'
)
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
from
theano.sandbox.cuda.basic_ops
import
gpu_from_host
f
=
function
([],
images2neibs
(
images
,
neib_shape
))
#, mode=mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
)
)
for
i
in
range
(
1000
):
for
i
in
range
(
1000
):
f
()
f
()
def
speed_neibs_wrap_centered
():
shape
=
(
100
,
40
,
18
,
18
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
from
theano.sandbox.cuda.basic_ops
import
gpu_from_host
def
speed_neibs_wrap_centered
():
shape
=
(
100
,
40
,
18
,
18
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
))
neib_shape
=
T
.
as_tensor_variable
((
3
,
3
))
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
))
#, mode=mode_without_gpu
)
f
=
function
([],
images2neibs
(
images
,
neib_shape
,
mode
=
"wrap_centered"
)
)
for
i
in
range
(
1000
):
for
i
in
range
(
1000
):
f
()
f
()
def
test_neibs_grad
():
def
test_neibs_grad
():
shape
=
(
2
,
3
,
4
,
4
)
shape
=
(
2
,
3
,
4
,
4
)
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
))
images
=
shared
(
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
))
cost
=
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
2
,
2
))),
axis
=
[
0
,
1
])
cost
=
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
2
,
2
))),
axis
=
[
0
,
1
])
grad
=
T
.
grad
(
cost
,
images
)
grad
=
T
.
grad
(
cost
,
images
)
...
@@ -344,60 +376,64 @@ def test_neibs_grad():
...
@@ -344,60 +376,64 @@ def test_neibs_grad():
got
=
f
()
got
=
f
()
should_get
=
[
numpy
.
asarray
(
290320.0
,
dtype
=
numpy
.
float32
),
should_get
=
[
numpy
.
asarray
(
290320.0
,
dtype
=
numpy
.
float32
),
numpy
.
asarray
([[[[
0.
,
2.
,
4.
,
6.
],
numpy
.
asarray
([[[[
0.
,
2.
,
4.
,
6.
],
[
8.
,
10.
,
12.
,
14.
],
[
8.
,
10.
,
12.
,
14.
],
[
16.
,
18.
,
20.
,
22.
],
[
16.
,
18.
,
20.
,
22.
],
[
24.
,
26.
,
28.
,
30.
]],
[
24.
,
26.
,
28.
,
30.
]],
[[
32.
,
34.
,
36.
,
38.
],
[[
32.
,
34.
,
36.
,
38.
],
[
40.
,
42.
,
44.
,
46.
],
[
40.
,
42.
,
44.
,
46.
],
[
48.
,
50.
,
52.
,
54.
],
[
48.
,
50.
,
52.
,
54.
],
[
56.
,
58.
,
60.
,
62.
]],
[
56.
,
58.
,
60.
,
62.
]],
[[
64.
,
66.
,
68.
,
70.
],
[[
64.
,
66.
,
68.
,
70.
],
[
72.
,
74.
,
76.
,
78.
],
[
72.
,
74.
,
76.
,
78.
],
[
80.
,
82.
,
84.
,
86.
],
[
80.
,
82.
,
84.
,
86.
],
[
88.
,
90.
,
92.
,
94.
]]],
[
88.
,
90.
,
92.
,
94.
]]],
[[[
96.
,
98.
,
100.
,
102.
],
[[[
96.
,
98.
,
100.
,
102.
],
[
104.
,
106.
,
108.
,
110.
],
[
104.
,
106.
,
108.
,
110.
],
[
112.
,
114.
,
116.
,
118.
],
[
112.
,
114.
,
116.
,
118.
],
[
120.
,
122.
,
124.
,
126.
]],
[
120.
,
122.
,
124.
,
126.
]],
[[
128.
,
130.
,
132.
,
134.
],
[[
128.
,
130.
,
132.
,
134.
],
[
136.
,
138.
,
140.
,
142.
],
[
136.
,
138.
,
140.
,
142.
],
[
144.
,
146.
,
148.
,
150.
],
[
144.
,
146.
,
148.
,
150.
],
[
152.
,
154.
,
156.
,
158.
]],
[
152.
,
154.
,
156.
,
158.
]],
[[
160.
,
162.
,
164.
,
166.
],
[[
160.
,
162.
,
164.
,
166.
],
[
168.
,
170.
,
172.
,
174.
],
[
168.
,
170.
,
172.
,
174.
],
[
176.
,
178.
,
180.
,
182.
],
[
176.
,
178.
,
180.
,
182.
],
[
184.
,
186.
,
188.
,
190.
]]]],
dtype
=
numpy
.
float32
)]
[
184.
,
186.
,
188.
,
190.
]]]],
dtype
=
numpy
.
float32
)]
assert
numpy
.
allclose
(
got
[
0
],
should_get
[
0
])
assert
numpy
.
allclose
(
got
[
0
],
should_get
[
0
])
assert
numpy
.
allclose
(
got
[
1
],
should_get
[
1
])
assert
numpy
.
allclose
(
got
[
1
],
should_get
[
1
])
def
test_neibs_grad_verify_grad
():
def
test_neibs_grad_verify_grad
():
shape
=
(
2
,
3
,
4
,
4
)
shape
=
(
2
,
3
,
4
,
4
)
images
=
T
.
dtensor4
()
images
=
T
.
dtensor4
()
images_val
=
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
)
images_val
=
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
)
def
fn
(
images
):
def
fn
(
images
):
return
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
2
,
2
))),
axis
=
[
0
,
1
])
return
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
2
,
2
))),
axis
=
[
0
,
1
])
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_without_gpu
)
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_without_gpu
)
if
cuda
.
cuda_available
:
if
cuda
.
cuda_available
:
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_with_gpu
)
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_with_gpu
)
def
test_neibs_grad_verify_grad_warp_centered
():
def
test_neibs_grad_verify_grad_warp_centered
():
# It is not implemented for now. So test that we raise an error.
# It is not implemented for now. So test that we raise an error.
shape
=
(
2
,
3
,
6
,
6
)
shape
=
(
2
,
3
,
6
,
6
)
images
=
T
.
dtensor4
()
images
=
T
.
dtensor4
()
images_val
=
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
)
images_val
=
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
)
def
fn
(
images
):
def
fn
(
images
):
return
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
3
,
3
),
mode
=
'wrap_centered'
)),
axis
=
[
0
,
1
])
return
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
3
,
3
),
mode
=
'wrap_centered'
)),
axis
=
[
0
,
1
])
try
:
try
:
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_without_gpu
)
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_without_gpu
)
raise
Exception
(
"Expected an error"
)
raise
Exception
(
"Expected an error"
)
...
@@ -411,42 +447,48 @@ def test_neibs_grad_verify_grad_warp_centered():
...
@@ -411,42 +447,48 @@ def test_neibs_grad_verify_grad_warp_centered():
except
NotImplementedError
:
except
NotImplementedError
:
pass
pass
def
test_neibs_ignore_border
():
def
test_neibs_ignore_border
():
shape
=
(
2
,
3
,
5
,
5
)
shape
=
(
2
,
3
,
5
,
5
)
images
=
T
.
dtensor4
()
images
=
T
.
dtensor4
()
images_val
=
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
)
images_val
=
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
)
def
fn
(
images
):
def
fn
(
images
):
return
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
2
,
2
),
mode
=
'ignore_borders'
)),
axis
=
[
0
,
1
])
return
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
2
,
2
),
mode
=
'ignore_borders'
)),
axis
=
[
0
,
1
])
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_without_gpu
)
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_without_gpu
)
# not implemented for gpu
# not implemented for gpu
# if cuda.cuda_available:
# if cuda.cuda_available:
# unittest_tools.verify_grad(fn, [images_val], mode=mode_with_gpu)
# unittest_tools.verify_grad(fn, [images_val], mode=mode_with_gpu)
def
test_neibs_valid_with_inconsistent_borders
():
def
test_neibs_valid_with_inconsistent_borders
():
shape
=
(
2
,
3
,
5
,
5
)
shape
=
(
2
,
3
,
5
,
5
)
images
=
T
.
dtensor4
()
images
=
T
.
dtensor4
()
images_val
=
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
)
images_val
=
numpy
.
arange
(
numpy
.
prod
(
shape
),
dtype
=
'float32'
)
.
reshape
(
shape
)
def
fn
(
images
):
def
fn
(
images
):
return
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
2
,
2
),
mode
=
'valid'
)),
axis
=
[
0
,
1
])
return
T
.
sum
(
T
.
sqr
(
images2neibs
(
images
,
(
2
,
2
),
mode
=
'valid'
)),
axis
=
[
0
,
1
])
try
:
try
:
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_without_gpu
)
unittest_tools
.
verify_grad
(
fn
,
[
images_val
],
mode
=
mode_without_gpu
)
assert
False
,
"An error was expected"
assert
False
,
"An error was expected"
except
TypeError
:
except
TypeError
:
# This is expected if the assert is there
# This is expected if the assert is there
pass
pass
def
test_neibs2images_crash_on_grad
():
def
test_neibs2images_crash_on_grad
():
# say we had images of size (2,
3,20,
20)
# say we had images of size (2,
3, 20,
20)
# then we extracted 2x2 neighbors on this, we get (2
*3*10*
10, 4)
# then we extracted 2x2 neighbors on this, we get (2
* 3 * 10 *
10, 4)
neibs
=
T
.
dmatrix
()
neibs
=
T
.
dmatrix
()
neibs_val
=
numpy
.
random
.
rand
(
600
,
4
)
neibs_val
=
numpy
.
random
.
rand
(
600
,
4
)
to_images
=
T
.
sum
(
neibs2images
(
neibs
,
(
2
,
2
),
(
2
,
3
,
20
,
20
)))
to_images
=
T
.
sum
(
neibs2images
(
neibs
,
(
2
,
2
),
(
2
,
3
,
20
,
20
)))
g
=
T
.
grad
(
to_images
,
neibs
)
g
=
T
.
grad
(
to_images
,
neibs
)
fn
=
theano
.
function
([
neibs
],
to_images
,
mode
=
mode_without_gpu
)
fn
=
theano
.
function
([
neibs
],
to_images
,
mode
=
mode_without_gpu
)
print
"Compiled"
print
"Compiled"
...
...
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