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testgroup
pytensor
Commits
85db9b9d
提交
85db9b9d
authored
11月 15, 2013
作者:
Frédéric Bastien
浏览文件
操作
浏览文件
下载
差异文件
Merge pull request #1608 from lamblin/fix_rng_empty_shape
Fix rng empty shape
上级
33c2cfce
2c903c74
隐藏空白字符变更
内嵌
并排
正在显示
3 个修改的文件
包含
86 行增加
和
44 行删除
+86
-44
rng_mrg.py
theano/sandbox/rng_mrg.py
+7
-3
test_rng_mrg.py
theano/sandbox/test_rng_mrg.py
+75
-40
raw_random.py
theano/tensor/raw_random.py
+4
-1
没有找到文件。
theano/sandbox/rng_mrg.py
浏览文件 @
85db9b9d
...
@@ -10,6 +10,7 @@ import warnings
...
@@ -10,6 +10,7 @@ import warnings
import
numpy
import
numpy
from
theano
import
Op
,
Apply
,
shared
,
config
,
Variable
from
theano
import
Op
,
Apply
,
shared
,
config
,
Variable
from
theano
import
tensor
from
theano.tensor
import
(
raw_random
,
TensorType
,
as_tensor_variable
,
from
theano.tensor
import
(
raw_random
,
TensorType
,
as_tensor_variable
,
get_vector_length
,
cast
,
opt
,
scal
)
get_vector_length
,
cast
,
opt
,
scal
)
from
theano.tensor
import
sqrt
,
log
,
sin
,
cos
,
join
,
prod
from
theano.tensor
import
sqrt
,
log
,
sin
,
cos
,
join
,
prod
...
@@ -890,7 +891,8 @@ class MRG_RandomStreams(object):
...
@@ -890,7 +891,8 @@ class MRG_RandomStreams(object):
constant
=
False
constant
=
False
if
isinstance
(
size
,
tuple
)
and
all
([
isinstance
(
i
,
(
numpy
.
integer
,
int
))
for
i
in
size
]):
if
isinstance
(
size
,
tuple
)
and
all
([
isinstance
(
i
,
(
numpy
.
integer
,
int
))
for
i
in
size
]):
constant
=
True
constant
=
True
n_samples
=
numpy
.
prod
(
size
)
# Force dtype because it defaults to float when size is empty
n_samples
=
numpy
.
prod
(
size
,
dtype
=
'int64'
)
if
n_samples
%
2
==
1
:
if
n_samples
%
2
==
1
:
n_samples
+=
1
n_samples
+=
1
...
@@ -928,8 +930,10 @@ class MRG_RandomStreams(object):
...
@@ -928,8 +930,10 @@ class MRG_RandomStreams(object):
else
:
else
:
final_samples
=
normal_samples
[:
prod
(
size
)]
final_samples
=
normal_samples
[:
prod
(
size
)]
if
size
:
if
not
size
:
final_samples
=
final_samples
.
reshape
(
size
)
# Force the dtype to be int64, otherwise reshape complains
size
=
tensor
.
constant
(
size
,
dtype
=
'int64'
)
final_samples
=
final_samples
.
reshape
(
size
)
final_samples
=
avg
+
std
*
final_samples
final_samples
=
avg
+
std
*
final_samples
...
...
theano/sandbox/test_rng_mrg.py
浏览文件 @
85db9b9d
...
@@ -303,11 +303,11 @@ def test_consistency_GPU_parallel():
...
@@ -303,11 +303,11 @@ def test_consistency_GPU_parallel():
def
basictest
(
f
,
steps
,
sample_size
,
prefix
=
""
,
allow_01
=
False
,
inputs
=
None
,
def
basictest
(
f
,
steps
,
sample_size
,
prefix
=
""
,
allow_01
=
False
,
inputs
=
None
,
target_avg
=
0.5
,
target_std
=
None
,
mean_rtol
=
0.01
):
target_avg
=
0.5
,
target_std
=
None
,
mean_rtol
=
0.01
,
std_tol
=
0.01
):
if
inputs
is
None
:
if
inputs
is
None
:
inputs
=
[]
inputs
=
[]
dt
=
0.0
dt
=
0.0
avg_
std
=
0.0
avg_
var
=
0.0
for
i
in
xrange
(
steps
):
for
i
in
xrange
(
steps
):
t0
=
time
.
time
()
t0
=
time
.
time
()
...
@@ -317,16 +317,14 @@ def basictest(f, steps, sample_size, prefix="", allow_01=False, inputs=None,
...
@@ -317,16 +317,14 @@ def basictest(f, steps, sample_size, prefix="", allow_01=False, inputs=None,
ival
=
numpy
.
asarray
(
ival
)
ival
=
numpy
.
asarray
(
ival
)
if
i
==
0
:
if
i
==
0
:
mean
=
numpy
.
array
(
ival
,
copy
=
True
)
mean
=
numpy
.
array
(
ival
,
copy
=
True
)
#avg_std = numpy.std(ival)
avg_var
=
numpy
.
mean
((
ival
-
target_avg
)
**
2
)
avg_std
=
numpy
.
sqrt
(
numpy
.
mean
((
ival
-
target_avg
)
**
2
))
min_
=
ival
.
min
()
min_
=
ival
.
min
()
max_
=
ival
.
max
()
max_
=
ival
.
max
()
else
:
else
:
alpha
=
1.0
/
(
1
+
i
)
alpha
=
1.0
/
(
1
+
i
)
mean
=
alpha
*
ival
+
(
1
-
alpha
)
*
mean
mean
=
alpha
*
ival
+
(
1
-
alpha
)
*
mean
#avg_std = alpha * numpy.std(ival) + (1-alpha)*avg_std
avg_var
=
(
alpha
*
numpy
.
mean
((
ival
-
target_avg
)
**
2
)
avg_std
=
alpha
*
numpy
.
sqrt
(
numpy
.
mean
((
ival
-
target_avg
)
**
2
+
(
1
-
alpha
)
*
avg_var
)
))
+
(
1
-
alpha
)
*
avg_std
min_
=
min
(
min_
,
ival
.
min
())
min_
=
min
(
min_
,
ival
.
min
())
max_
=
max
(
max_
,
ival
.
max
())
max_
=
max
(
max_
,
ival
.
max
())
if
not
allow_01
:
if
not
allow_01
:
...
@@ -336,17 +334,21 @@ def basictest(f, steps, sample_size, prefix="", allow_01=False, inputs=None,
...
@@ -336,17 +334,21 @@ def basictest(f, steps, sample_size, prefix="", allow_01=False, inputs=None,
if
hasattr
(
target_avg
,
'shape'
):
# looks if target_avg is an array
if
hasattr
(
target_avg
,
'shape'
):
# looks if target_avg is an array
diff
=
numpy
.
mean
(
abs
(
mean
-
target_avg
))
diff
=
numpy
.
mean
(
abs
(
mean
-
target_avg
))
#print prefix, 'mean diff with mean', diff
#print prefix, 'mean diff with mean', diff
assert
diff
<
mean_rtol
,
'bad mean?
%
f
%
f'
%
(
mean
,
target_avg
)
assert
numpy
.
all
(
diff
<
mean_rtol
*
(
1
+
abs
(
target_avg
))),
(
'bad mean?
%
s
%
s'
%
(
mean
,
target_avg
))
else
:
# if target_avg is a scalar, then we can do the mean of
else
:
# if target_avg is a scalar, then we can do the mean of
# `mean` to get something more precise
# `mean` to get something more precise
mean
=
numpy
.
mean
(
mean
)
mean
=
numpy
.
mean
(
mean
)
#print prefix, 'mean', mean
#print prefix, 'mean', mean
assert
abs
(
mean
-
target_avg
)
<
mean_rtol
,
'bad mean?
%
f
%
f'
%
(
assert
abs
(
mean
-
target_avg
)
<
mean_rtol
*
(
1
+
abs
(
target_avg
)),
(
numpy
.
mean
(
mean
),
target_avg
)
'bad mean?
%
f
%
f'
%
(
mean
,
target_avg
))
#print prefix, 'std', avg_std
std
=
numpy
.
sqrt
(
avg_var
)
#print prefix, 'var', avg_var
#print prefix, 'std', std
if
target_std
is
not
None
:
if
target_std
is
not
None
:
assert
abs
(
avg_std
-
target_std
)
<
.
01
,
'bad std?
%
f
%
f'
%
(
avg_std
,
assert
abs
(
std
-
target_std
)
<
std_tol
*
(
1
+
abs
(
target_std
)),
(
target_std
)
'bad std?
%
f
%
f'
%
(
std
,
target_std
)
)
#print prefix, 'time', dt
#print prefix, 'time', dt
#print prefix, 'elements', steps * sample_size[0] * sample_size[1]
#print prefix, 'elements', steps * sample_size[0] * sample_size[1]
#print prefix, 'samples/sec', steps * sample_size[0] * sample_size[1] / dt
#print prefix, 'samples/sec', steps * sample_size[0] * sample_size[1] / dt
...
@@ -368,11 +370,14 @@ def test_uniform():
...
@@ -368,11 +370,14 @@ def test_uniform():
steps
=
int
(
1e3
)
steps
=
int
(
1e3
)
x
=
tensor
.
matrix
()
x
=
tensor
.
matrix
()
for
size
,
var_input
,
input
in
[
for
size
,
const_size
,
var_input
,
input
in
[
(
sample_size
,
[],
[]),
(
sample_size
,
sample_size
,
[],
[]),
(
x
.
shape
,
[
x
],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)]),
(
x
.
shape
,
sample_size
,
[
x
],
((
x
.
shape
[
0
],
sample_size
[
1
]),
[
x
],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)]),
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)])
((
x
.
shape
[
0
],
sample_size
[
1
]),
sample_size
,
[
x
],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)]),
# test empty size (scalar)
((),
(),
[],
[]),
]:
]:
#### TEST CPU IMPLEMENTATION ####
#### TEST CPU IMPLEMENTATION ####
...
@@ -396,7 +401,13 @@ def test_uniform():
...
@@ -396,7 +401,13 @@ def test_uniform():
#print 'CPU: random?[:10], random?[-10:]'
#print 'CPU: random?[:10], random?[-10:]'
#print cpu_out[0, 0:10]
#print cpu_out[0, 0:10]
#print cpu_out[-1, -10:]
#print cpu_out[-1, -10:]
basictest
(
f
,
steps
,
sample_size
,
prefix
=
'mrg cpu'
,
inputs
=
input
)
# Increase the number of steps if sizes implies only a few samples
if
numpy
.
prod
(
const_size
)
<
10
:
steps_
=
steps
*
100
else
:
steps_
=
steps
basictest
(
f
,
steps_
,
const_size
,
prefix
=
'mrg cpu'
,
inputs
=
input
)
if
mode
!=
'FAST_COMPILE'
and
cuda_available
:
if
mode
!=
'FAST_COMPILE'
and
cuda_available
:
#print ''
#print ''
...
@@ -418,7 +429,7 @@ def test_uniform():
...
@@ -418,7 +429,7 @@ def test_uniform():
#print 'GPU: random?[:10], random?[-10:]'
#print 'GPU: random?[:10], random?[-10:]'
#print gpu_out[0, 0:10]
#print gpu_out[0, 0:10]
#print gpu_out[-1, -10:]
#print gpu_out[-1, -10:]
basictest
(
f
,
steps
,
sample
_size
,
prefix
=
'mrg gpu'
,
inputs
=
input
)
basictest
(
f
,
steps
_
,
const
_size
,
prefix
=
'mrg gpu'
,
inputs
=
input
)
numpy
.
testing
.
assert_array_almost_equal
(
cpu_out
,
gpu_out
,
numpy
.
testing
.
assert_array_almost_equal
(
cpu_out
,
gpu_out
,
decimal
=
6
)
decimal
=
6
)
...
@@ -430,7 +441,7 @@ def test_uniform():
...
@@ -430,7 +441,7 @@ def test_uniform():
uu
=
RR
.
uniform
(
size
=
size
)
uu
=
RR
.
uniform
(
size
=
size
)
ff
=
theano
.
function
(
var_input
,
uu
,
mode
=
mode
)
ff
=
theano
.
function
(
var_input
,
uu
,
mode
=
mode
)
# It's not our problem if numpy generates 0 or 1
# It's not our problem if numpy generates 0 or 1
basictest
(
ff
,
steps
,
sample
_size
,
prefix
=
'numpy'
,
basictest
(
ff
,
steps
_
,
const
_size
,
prefix
=
'numpy'
,
allow_01
=
True
,
inputs
=
input
)
allow_01
=
True
,
inputs
=
input
)
...
@@ -456,11 +467,14 @@ def test_binomial():
...
@@ -456,11 +467,14 @@ def test_binomial():
x
=
tensor
.
matrix
()
x
=
tensor
.
matrix
()
v
=
tensor
.
vector
()
v
=
tensor
.
vector
()
for
mean
in
[
0.1
,
0.5
]:
for
mean
in
[
0.1
,
0.5
]:
for
size
,
var_input
,
input
in
[
for
size
,
const_size
,
var_input
,
input
in
[
(
sample_size
,
[],
[]),
(
sample_size
,
sample_size
,
[],
[]),
(
x
.
shape
,
[
x
],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)]),
(
x
.
shape
,
sample_size
,
[
x
],
((
x
.
shape
[
0
],
sample_size
[
1
]),
[
x
],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)]),
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)])
((
x
.
shape
[
0
],
sample_size
[
1
]),
sample_size
,
[
x
],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)]),
# test empty size (scalar)
((),
(),
[],
[]),
]:
]:
#print ''
#print ''
...
@@ -474,7 +488,13 @@ def test_binomial():
...
@@ -474,7 +488,13 @@ def test_binomial():
out
=
f
(
*
input
)
out
=
f
(
*
input
)
#print 'random?[:10]\n', out[0, 0:10]
#print 'random?[:10]\n', out[0, 0:10]
#print 'random?[-1,-10:]\n', out[-1, -10:]
#print 'random?[-1,-10:]\n', out[-1, -10:]
basictest
(
f
,
steps
,
sample_size
,
prefix
=
'mrg cpu'
,
# Increase the number of steps if sizes implies only a few samples
if
numpy
.
prod
(
const_size
)
<
10
:
steps_
=
steps
*
100
else
:
steps_
=
steps
basictest
(
f
,
steps_
,
const_size
,
prefix
=
'mrg cpu'
,
inputs
=
input
,
allow_01
=
True
,
inputs
=
input
,
allow_01
=
True
,
target_avg
=
mean
,
mean_rtol
=
rtol
)
target_avg
=
mean
,
mean_rtol
=
rtol
)
...
@@ -494,7 +514,7 @@ def test_binomial():
...
@@ -494,7 +514,7 @@ def test_binomial():
gpu_out
=
numpy
.
asarray
(
f
(
*
input
))
gpu_out
=
numpy
.
asarray
(
f
(
*
input
))
#print 'random?[:10]\n', gpu_out[0, 0:10]
#print 'random?[:10]\n', gpu_out[0, 0:10]
#print 'random?[-1,-10:]\n', gpu_out[-1, -10:]
#print 'random?[-1,-10:]\n', gpu_out[-1, -10:]
basictest
(
f
,
steps
,
sample
_size
,
prefix
=
'mrg gpu'
,
basictest
(
f
,
steps
_
,
const
_size
,
prefix
=
'mrg gpu'
,
inputs
=
input
,
allow_01
=
True
,
inputs
=
input
,
allow_01
=
True
,
target_avg
=
mean
,
mean_rtol
=
rtol
)
target_avg
=
mean
,
mean_rtol
=
rtol
)
numpy
.
testing
.
assert_array_almost_equal
(
out
,
gpu_out
,
numpy
.
testing
.
assert_array_almost_equal
(
out
,
gpu_out
,
...
@@ -508,7 +528,7 @@ def test_binomial():
...
@@ -508,7 +528,7 @@ def test_binomial():
uu
=
RR
.
binomial
(
size
=
size
,
p
=
mean
)
uu
=
RR
.
binomial
(
size
=
size
,
p
=
mean
)
ff
=
theano
.
function
(
var_input
,
uu
,
mode
=
mode
)
ff
=
theano
.
function
(
var_input
,
uu
,
mode
=
mode
)
# It's not our problem if numpy generates 0 or 1
# It's not our problem if numpy generates 0 or 1
basictest
(
ff
,
steps
,
sample
_size
,
prefix
=
'numpy'
,
allow_01
=
True
,
basictest
(
ff
,
steps
_
,
const
_size
,
prefix
=
'numpy'
,
allow_01
=
True
,
inputs
=
input
,
target_avg
=
mean
,
mean_rtol
=
rtol
)
inputs
=
input
,
target_avg
=
mean
,
mean_rtol
=
rtol
)
...
@@ -525,24 +545,32 @@ def test_normal0():
...
@@ -525,24 +545,32 @@ def test_normal0():
default_rtol
=
.
01
default_rtol
=
.
01
sample_size_odd
=
(
sample_size
[
0
],
sample_size
[
1
]
-
1
)
sample_size_odd
=
(
sample_size
[
0
],
sample_size
[
1
]
-
1
)
x
=
tensor
.
matrix
()
x
=
tensor
.
matrix
()
for
size
,
const_size
,
var_input
,
input
,
avg
,
rtol
in
[
(
sample_size
,
sample_size
,
[],
[],
-
5.
,
default_rtol
),
for
size
,
const_size
,
var_input
,
input
,
avg
,
rtol
,
std_tol
in
[
(
sample_size
,
sample_size
,
[],
[],
-
5.
,
default_rtol
,
default_rtol
),
(
x
.
shape
,
sample_size
,
[
x
],
(
x
.
shape
,
sample_size
,
[
x
],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)],
-
5.
,
default_rtol
),
-
5.
,
default_rtol
,
default_rtol
),
((
x
.
shape
[
0
],
sample_size
[
1
]),
sample_size
,
[
x
],
((
x
.
shape
[
0
],
sample_size
[
1
]),
sample_size
,
[
x
],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)],
[
numpy
.
zeros
(
sample_size
,
dtype
=
config
.
floatX
)],
-
5.
,
default_rtol
),
-
5.
,
default_rtol
,
default_rtol
),
#test odd value
#test odd value
(
sample_size_odd
,
sample_size_odd
,
[],
[],
-
5.
,
default_rtol
),
(
sample_size_odd
,
sample_size_odd
,
[],
[],
-
5.
,
default_rtol
,
default_rtol
),
#test odd value
#test odd value
(
x
.
shape
,
sample_size_odd
,
[
x
],
(
x
.
shape
,
sample_size_odd
,
[
x
],
[
numpy
.
zeros
(
sample_size_odd
,
dtype
=
config
.
floatX
)],
[
numpy
.
zeros
(
sample_size_odd
,
dtype
=
config
.
floatX
)],
-
5.
,
default_rtol
),
-
5.
,
default_rtol
,
default_rtol
),
(
sample_size
,
sample_size
,
[],
[],
(
sample_size
,
sample_size
,
[],
[],
numpy
.
arange
(
numpy
.
prod
(
sample_size
),
numpy
.
arange
(
numpy
.
prod
(
sample_size
),
dtype
=
'float32'
)
.
reshape
(
sample_size
),
dtype
=
'float32'
)
.
reshape
(
sample_size
),
10.
*
std
/
numpy
.
sqrt
(
steps
)),
10.
*
std
/
numpy
.
sqrt
(
steps
),
default_rtol
),
# test empty size (scalar)
((),
(),
[],
[],
-
5.
,
default_rtol
,
0.02
),
# test with few samples at the same time
((
1
,),
(
1
,),
[],
[],
-
5.
,
default_rtol
,
0.02
),
((
2
,),
(
2
,),
[],
[],
-
5.
,
default_rtol
,
0.02
),
((
3
,),
(
3
,),
[],
[],
-
5.
,
default_rtol
,
0.02
),
]:
]:
#print ''
#print ''
#print 'ON CPU:'
#print 'ON CPU:'
...
@@ -555,8 +583,15 @@ def test_normal0():
...
@@ -555,8 +583,15 @@ def test_normal0():
#theano.printing.debugprint(f)
#theano.printing.debugprint(f)
out
=
f
(
*
input
)
out
=
f
(
*
input
)
#print 'random?[:10]\n', out[0, 0:10]
#print 'random?[:10]\n', out[0, 0:10]
basictest
(
f
,
steps
,
const_size
,
target_avg
=
avg
,
target_std
=
std
,
prefix
=
'mrg '
,
allow_01
=
True
,
inputs
=
input
,
mean_rtol
=
rtol
)
# Increase the number of steps if size implies only a few samples
if
numpy
.
prod
(
const_size
)
<
10
:
steps_
=
steps
*
50
else
:
steps_
=
steps
basictest
(
f
,
steps_
,
const_size
,
target_avg
=
avg
,
target_std
=
std
,
prefix
=
'mrg '
,
allow_01
=
True
,
inputs
=
input
,
mean_rtol
=
rtol
,
std_tol
=
std_tol
)
sys
.
stdout
.
flush
()
sys
.
stdout
.
flush
()
...
@@ -578,7 +613,7 @@ def test_normal0():
...
@@ -578,7 +613,7 @@ def test_normal0():
#print 'random?[:10]\n', gpu_out[0, 0:10]
#print 'random?[:10]\n', gpu_out[0, 0:10]
#print '----'
#print '----'
sys
.
stdout
.
flush
()
sys
.
stdout
.
flush
()
basictest
(
f
,
steps
,
const_size
,
target_avg
=
avg
,
target_std
=
std
,
basictest
(
f
,
steps
_
,
const_size
,
target_avg
=
avg
,
target_std
=
std
,
prefix
=
'gpu mrg '
,
allow_01
=
True
,
inputs
=
input
,
prefix
=
'gpu mrg '
,
allow_01
=
True
,
inputs
=
input
,
mean_rtol
=
rtol
)
mean_rtol
=
rtol
)
# Need to allow some rounding error as their is float
# Need to allow some rounding error as their is float
...
@@ -592,7 +627,7 @@ def test_normal0():
...
@@ -592,7 +627,7 @@ def test_normal0():
nn
=
RR
.
normal
(
size
=
size
,
avg
=
avg
,
std
=
std
)
nn
=
RR
.
normal
(
size
=
size
,
avg
=
avg
,
std
=
std
)
ff
=
theano
.
function
(
var_input
,
nn
)
ff
=
theano
.
function
(
var_input
,
nn
)
basictest
(
ff
,
steps
,
const_size
,
target_avg
=
avg
,
target_std
=
std
,
basictest
(
ff
,
steps
_
,
const_size
,
target_avg
=
avg
,
target_std
=
std
,
prefix
=
'numpy '
,
allow_01
=
True
,
inputs
=
input
,
mean_rtol
=
rtol
)
prefix
=
'numpy '
,
allow_01
=
True
,
inputs
=
input
,
mean_rtol
=
rtol
)
...
...
theano/tensor/raw_random.py
浏览文件 @
85db9b9d
...
@@ -351,7 +351,10 @@ def _infer_ndim_bcast(ndim, shape, *args):
...
@@ -351,7 +351,10 @@ def _infer_ndim_bcast(ndim, shape, *args):
ValueError
(
'negative shape'
,
s
)
ValueError
(
'negative shape'
,
s
)
# post-condition: shape may still contain both symbolic and
# post-condition: shape may still contain both symbolic and
# non-symbolic things
# non-symbolic things
v_shape
=
tensor
.
stack
(
*
pre_v_shape
)
if
len
(
pre_v_shape
)
==
0
:
v_shape
=
tensor
.
constant
([],
dtype
=
'int32'
)
else
:
v_shape
=
tensor
.
stack
(
*
pre_v_shape
)
elif
shape
is
None
:
elif
shape
is
None
:
# The number of drawn samples will be determined automatically,
# The number of drawn samples will be determined automatically,
...
...
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