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testgroup
pytensor
Commits
70b5f2c1
提交
70b5f2c1
authored
6月 30, 2015
作者:
Iban Harlouchet
提交者:
Frederic
7月 23, 2015
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电子邮件补丁
差异文件
flake8 for tensor/nnet/nnet.py
上级
f4edcc59
显示空白字符变更
内嵌
并排
正在显示
2 个修改的文件
包含
39 行增加
和
38 行删除
+39
-38
nnet.py
theano/tensor/nnet/nnet.py
+39
-37
test_flake8.py
theano/tests/test_flake8.py
+0
-1
没有找到文件。
theano/tensor/nnet/nnet.py
浏览文件 @
70b5f2c1
...
...
@@ -15,6 +15,7 @@ from six.moves import xrange
import
theano
from
theano
import
gof
from
theano
import
scalar
from
theano.tensor
import
basic
as
tensor
from
theano.tensor
import
subtensor
from
theano.tensor
import
elemwise
...
...
@@ -27,12 +28,12 @@ from theano.gradient import DisconnectedType
from
theano.gradient
import
grad_not_implemented
from
theano.tensor.type
import
values_eq_approx_remove_nan
############
#
# TENSOR OPS
#
class
SoftmaxWithBias
(
gof
.
Op
):
"""
An L{Op} for the output of neural-net multiclass classifiers.
...
...
@@ -300,11 +301,11 @@ class SoftmaxGrad(gof.Op):
dy
,
sm
=
inp
g
,
=
grads
tmp
=
g
+
tensor
.
neg
(
tensor
.
sum
(
g
*
sm
,
axis
=
1
)
.
dimshuffle
((
0
,
'x'
)))
tmp
=
g
+
tensor
.
neg
(
tensor
.
sum
(
g
*
sm
,
axis
=
1
)
.
dimshuffle
((
0
,
'x'
)))
g_dy
=
tmp
*
sm
tmp2
=
tensor
.
sum
(
dy
*
sm
,
axis
=
1
)
.
dimshuffle
((
0
,
'x'
))
g_sm
=
tmp
*
dy
-
g
*
tmp2
tmp2
=
tensor
.
sum
(
dy
*
sm
,
axis
=
1
)
.
dimshuffle
((
0
,
'x'
))
g_sm
=
tmp
*
dy
-
g
*
tmp2
return
g_dy
,
g_sm
...
...
@@ -571,12 +572,15 @@ class Softmax(gof.Op):
softmax_op
=
Softmax
()
def
softmax_graph
(
c
):
return
tensor
.
exp
(
c
)
/
tensor
.
exp
(
c
)
.
sum
(
axis
=-
1
,
keepdims
=
True
)
def
softmax
(
c
):
return
softmax_op
(
c
)
@opt.register_specialize
(
'fast_compile_gpu'
)
@gof.local_optimizer
([
softmax_op
])
def
local_softmax_with_bias
(
node
):
...
...
@@ -593,9 +597,9 @@ def local_softmax_with_bias(node):
# tensor.DimShuffle) since specialization comes
# relatively late in optimization, we don't want to
# put in extra DimShuffles un-necessarily.
if
(
x_in
.
owner
and
isinstance
(
x_in
.
owner
.
op
,
tensor
.
DimShuffle
)
and
list
(
x_in
.
owner
.
inputs
[
0
]
.
type
.
broadcastable
)
==
[
False
]):
if
(
x_in
.
owner
and
isinstance
(
x_in
.
owner
.
op
,
tensor
.
DimShuffle
)
and
list
(
x_in
.
owner
.
inputs
[
0
]
.
type
.
broadcastable
)
==
[
False
]):
# cut out the DimShuffle that was broadcasting a vector
vectors
.
append
(
x_in
.
owner
.
inputs
[
0
])
else
:
...
...
@@ -673,8 +677,7 @@ def softmax_simplifier(numerators, denominators):
numerators
.
append
(
softmax_op
(
x
))
return
numerators
,
denominators
opt
.
local_mul_canonizer
.
add_simplifier
(
softmax_simplifier
,
'softmax_simplifier'
)
opt
.
local_mul_canonizer
.
add_simplifier
(
softmax_simplifier
,
'softmax_simplifier'
)
if
0
:
@opt.register_specialize
...
...
@@ -836,7 +839,7 @@ class CrossentropySoftmaxArgmax1HotWithBias(gof.Op):
# TODO: Is this correct? It used to be y, not y_idx
nll
=
tensor
.
TensorType
(
x
.
type
.
dtype
,
y_idx
.
type
.
broadcastable
)
()
y_idx
.
type
.
broadcastable
)
.
make_variable
()
# nll = TensorType(x.dtype, y.broadcastable)
sm
=
x
.
type
()
am
=
y_idx
.
type
()
...
...
@@ -866,15 +869,14 @@ class CrossentropySoftmaxArgmax1HotWithBias(gof.Op):
if
any
(
y_idx
<
0
):
raise
ValueError
(
"y_i value out of bounds"
)
sm
=
numpy
.
zeros_like
(
x
)
# softmax
nll
=
numpy
.
zeros
(
x
.
shape
[
0
],
dtype
=
node
.
outputs
[
0
]
.
type
.
dtype
)
# nll(y | softmax(x))
nll
=
numpy
.
zeros
(
x
.
shape
[
0
],
dtype
=
node
.
outputs
[
0
]
.
type
.
dtype
)
# nll(y | softmax(x))
am
=
numpy
.
zeros_like
(
y_idx
)
for
i
in
xrange
(
sm
.
shape
[
0
]):
# add the bias vector to the i'th row of x
row
=
x
[
i
]
+
b
# get the maximum value of i'th row for numerically safe
#softmax / nll
#
softmax / nll
am
[
i
]
=
numpy
.
argmax
(
row
)
m
=
row
[
am
[
i
]]
...
...
@@ -1083,8 +1085,7 @@ class CrossentropySoftmax1HotWithBiasDx(gof.Op):
y_idx_range
=
tensor
.
arange
(
y_idx
.
shape
[
0
])
g_dy
=
tensor
.
sum
(
g_dx
*
subtensor
.
AdvancedIncSubtensor
()(
sm
,
tensor
.
fill
(
dy
,
-
1
),
y_idx_range
,
y_idx
),
axis
=
1
)
sm
,
tensor
.
fill
(
dy
,
-
1
),
y_idx_range
,
y_idx
),
axis
=
1
)
g_sm
=
dy
.
dimshuffle
(
0
,
'x'
)
*
g_dx
g_y_idx
=
grad_not_implemented
(
self
,
2
,
y_idx
)
return
[
g_dy
,
g_sm
,
g_y_idx
]
...
...
@@ -1226,8 +1227,7 @@ def crossentropy_softmax_max_and_argmax_1hot_with_bias(x, b, y_idx, **kwargs):
unnecessary? e.g. CrossentropySoftmaxArgmax1HotWithBias should return
the appropriate information (i.e. the max probability)?
"""
(
xent
,
softmax
)
=
crossentropy_softmax_1hot_with_bias
(
x
,
b
,
y_idx
,
**
kwargs
)
(
xent
,
softmax
)
=
crossentropy_softmax_1hot_with_bias
(
x
,
b
,
y_idx
,
**
kwargs
)
(
max_pr
,
argmax
)
=
tensor
.
max_and_argmax
(
softmax
,
axis
=-
1
)
return
(
xent
,
softmax
,
max_pr
,
argmax
)
...
...
@@ -1251,8 +1251,8 @@ class CrossentropyCategorical1HotGrad(gof.Op):
g_coding_strg
,
=
out
g_coding
=
numpy
.
zeros_like
(
coding_dist
)
for
i
in
xrange
(
len
(
g_y
)):
g_coding
[
i
,
true_one_of_n
[
i
]]
=
-
g_y
[
i
]
/
coding_dist
[
i
,
true_one_of_n
[
i
]]
g_coding
[
i
,
true_one_of_n
[
i
]]
=
(
-
g_y
[
i
]
/
coding_dist
[
i
,
true_one_of_n
[
i
]])
g_coding_strg
[
0
]
=
g_coding
def
infer_shape
(
self
,
node
,
in_shapes
):
...
...
@@ -1346,9 +1346,10 @@ def crossentropy_to_crossentropy_with_softmax_with_bias(fgraph):
sm
,
one_of_n
=
node
.
inputs
if
sm
.
owner
and
sm
.
owner
.
op
==
softmax_with_bias
:
x
,
b
=
sm
.
owner
.
inputs
new_nll
,
new_sm
,
new_am
=
crossentropy_softmax_argmax_1hot_with_bias
(
x
,
b
,
one_of_n
)
fgraph
.
replace_all_validate
([(
nll
,
new_nll
),
(
sm
,
new_sm
)],
new_nll
,
new_sm
,
new_am
=
crossentropy_softmax_argmax_1hot_with_bias
(
x
,
b
,
one_of_n
)
fgraph
.
replace_all_validate
(
[(
nll
,
new_nll
),
(
sm
,
new_sm
)],
reason
=
"crossentropy_to_crossentropy_with_softmax_with_bias"
)
return
True
...
...
@@ -1381,16 +1382,18 @@ def crossentropy_to_crossentropy_with_softmax(fgraph):
sm
,
one_of_n
=
node
.
inputs
if
sm
.
owner
and
sm
.
owner
.
op
==
softmax_op
:
x
,
=
sm
.
owner
.
inputs
new_nll
,
new_sm
,
new_am
=
crossentropy_softmax_argmax_1hot_with_bias
(
x
,
tensor
.
zeros_like
(
x
[
0
]),
one_of_n
)
fgraph
.
replace_all_validate
([(
nll
,
new_nll
),
(
sm
,
new_sm
)],
new_nll
,
new_sm
,
new_am
=
crossentropy_softmax_argmax_1hot_with_bias
(
x
,
tensor
.
zeros_like
(
x
[
0
]),
one_of_n
)
fgraph
.
replace_all_validate
(
[(
nll
,
new_nll
),
(
sm
,
new_sm
)],
reason
=
"crossentropy_to_crossentropy_with_softmax"
)
return
True
if
sm
.
owner
and
sm
.
owner
.
op
==
softmax_with_bias
:
x
,
b
=
sm
.
owner
.
inputs
new_nll
,
new_sm
,
new_am
=
crossentropy_softmax_argmax_1hot_with_bias
(
x
,
b
,
one_of_n
)
fgraph
.
replace_all_validate
([(
nll
,
new_nll
),
(
sm
,
new_sm
)],
fgraph
.
replace_all_validate
(
[(
nll
,
new_nll
),
(
sm
,
new_sm
)],
reason
=
"crossentropy_to_crossentropy_with_softmax"
)
return
True
...
...
@@ -1415,8 +1418,8 @@ def local_softmax_grad_to_crossentropy_with_softmax_grad(node):
if
(
g_coding_dist
.
owner
and
g_coding_dist
.
owner
.
op
==
crossentropy_categorical_1hot_grad
):
g_nll
,
coding_dist
,
true_one_of_n
=
g_coding_dist
.
owner
.
inputs
dx
=
crossentropy_softmax_1hot_with_bias_dx
(
g_nll
,
coding_dist
,
true_one_of_n
)
dx
=
crossentropy_softmax_1hot_with_bias_dx
(
g_nll
,
coding_dist
,
true_one_of_n
)
return
[
dx
]
...
...
@@ -1428,7 +1431,8 @@ def local_argmax_pushdown(node):
(
softmax_op
,
softplus
,
tensor
.
exp
,
tensor
.
log
,
tensor
.
tanh
,
sigmoid
,
softmax_with_bias
):
if
theano
.
config
.
warn
.
argmax_pushdown_bug
:
logging
.
getLogger
(
'theano.tensor.nnet.nnet'
)
.
warn
(
"WARNING: there "
logging
.
getLogger
(
'theano.tensor.nnet.nnet'
)
.
warn
(
"WARNING: there "
"was a bug in Theano fixed on May 27th, 2010 in this case."
" I.E. when we take the max of a softplus, softmax, exp, "
"log, tanh, sigmoid, softmax_with_bias op, we were doing "
...
...
@@ -1657,15 +1661,15 @@ def local_advanced_indexing_crossentropy_onehot_grad(node):
if
isinstance
(
denom
.
owner
.
op
,
subtensor
.
AdvancedSubtensor
):
# Base case
adv_subtensor
=
denom
#out_grad /= 1.
#
out_grad /= 1.
elif
denom
.
owner
.
op
==
tensor
.
mul
:
# Try to find the AdvancedSubtensor node mentionned above,
# and the output gradient
for
i
,
input
in
enumerate
(
denom
.
owner
.
inputs
):
if
input
.
owner
and
isinstance
(
input
.
owner
.
op
,
subtensor
.
AdvancedSubtensor
):
other_inputs
=
[
in_
for
(
j
,
in_
)
in
enumerate
(
denom
.
owner
.
inputs
)
if
j
!=
i
]
other_inputs
=
[
in_
for
(
j
,
in_
)
in
enumerate
(
denom
.
owner
.
inputs
)
if
j
!=
i
]
if
len
(
other_inputs
)
==
1
:
rest
=
other_inputs
[
0
]
else
:
...
...
@@ -1894,16 +1898,14 @@ def categorical_crossentropy(coding_dist, true_dist):
"""
if
true_dist
.
ndim
==
coding_dist
.
ndim
:
return
-
tensor
.
sum
(
true_dist
*
tensor
.
log
(
coding_dist
),
axis
=
coding_dist
.
ndim
-
1
)
return
-
tensor
.
sum
(
true_dist
*
tensor
.
log
(
coding_dist
),
axis
=
coding_dist
.
ndim
-
1
)
elif
true_dist
.
ndim
==
coding_dist
.
ndim
-
1
:
return
crossentropy_categorical_1hot
(
coding_dist
,
true_dist
)
else
:
raise
TypeError
(
'rank mismatch between coding and true distributions'
)
from
theano
import
scalar
class
Prepend_scalar_constant_to_each_row
(
gof
.
Op
):
__props__
=
()
...
...
@@ -2026,7 +2028,7 @@ local_log_softmax = gof.PatternSub(in_pattern=(tensor.log, (softmax_op, 'x')),
# don't do register_stabilize, this is to make local_log_softmax run
# only after another more specific optimization that stabilizes cross entropy
#opt.register_stabilize(local_log_softmax, name = 'local_log_softmax')
#
opt.register_stabilize(local_log_softmax, name = 'local_log_softmax')
opt
.
register_specialize
(
local_log_softmax
,
'fast_compile_gpu'
,
name
=
'local_log_softmax'
)
...
...
theano/tests/test_flake8.py
浏览文件 @
70b5f2c1
...
...
@@ -88,7 +88,6 @@ whitelist_flake8 = [
"tensor/signal/conv.py"
,
"tensor/signal/tests/test_conv.py"
,
"tensor/signal/tests/test_downsample.py"
,
"tensor/nnet/nnet.py"
,
"tensor/nnet/Conv3D.py"
,
"tensor/nnet/__init__.py"
,
"tensor/nnet/ConvTransp3D.py"
,
...
...
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