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pytensor
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53532957
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53532957
authored
7月 24, 2014
作者:
abergeron
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差异文件
Merge pull request #1993 from nouiz/crash_inc_sub_grad
Crash fix in IncSubtensor.grad
上级
d19e66d9
852114f3
显示空白字符变更
内嵌
并排
正在显示
2 个修改的文件
包含
62 行增加
和
38 行删除
+62
-38
subtensor.py
theano/tensor/subtensor.py
+33
-26
test_inc_subtensor.py
theano/tensor/tests/test_inc_subtensor.py
+29
-12
没有找到文件。
theano/tensor/subtensor.py
浏览文件 @
53532957
...
@@ -594,8 +594,7 @@ class Subtensor(Op):
...
@@ -594,8 +594,7 @@ class Subtensor(Op):
@staticmethod
@staticmethod
def
helper_c_code
(
node
,
name
,
inputs
,
outputs
,
sub
,
idx_list
,
view_ndim
,
def
helper_c_code
(
node
,
name
,
inputs
,
outputs
,
sub
,
idx_list
,
view_ndim
,
c_prefix
=
None
,
c_prefix
=
None
,
strides_mul
=
None
,
strides_mul
=
None
):
):
"""
"""
The parameters c_prefix are there to allow reusing this
The parameters c_prefix are there to allow reusing this
function on PyArray and CudaNdarray object.
function on PyArray and CudaNdarray object.
...
@@ -682,7 +681,8 @@ class Subtensor(Op):
...
@@ -682,7 +681,8 @@ class Subtensor(Op):
subensor_spec
=
"npy_intp * subtensor_spec = NULL;"
subensor_spec
=
"npy_intp * subtensor_spec = NULL;"
if
is_slice
:
if
is_slice
:
is_slice_init
=
"int is_slice[] = {"
+
","
.
join
([
str
(
s
)
for
s
in
is_slice
])
+
"};"
is_slice_init
=
"int is_slice[] = {"
+
","
.
join
([
str
(
s
)
for
s
in
is_slice
])
+
"};"
else
:
else
:
is_slice_init
=
"int* is_slice = NULL;"
is_slice_init
=
"int* is_slice = NULL;"
subtensor_init
=
"
\n
"
.
join
(
init_cmds
)
subtensor_init
=
"
\n
"
.
join
(
init_cmds
)
...
@@ -897,7 +897,8 @@ class Subtensor(Op):
...
@@ -897,7 +897,8 @@ class Subtensor(Op):
%(z)
s = xview;
%(z)
s = xview;
"""
%
locals
()
"""
%
locals
()
return
decl
+
checkNDim
+
"{"
+
get_xview
+
build_view
+
finish_view
+
"}"
return
(
decl
+
checkNDim
+
"{"
+
get_xview
+
build_view
+
finish_view
+
"}"
)
def
c_code_cache_version
(
self
):
def
c_code_cache_version
(
self
):
hv
=
self
.
helper_c_code_cache_version
()
hv
=
self
.
helper_c_code_cache_version
()
...
@@ -1022,9 +1023,9 @@ def inc_subtensor(x, y, inplace=False, set_instead_of_inc=False,
...
@@ -1022,9 +1023,9 @@ def inc_subtensor(x, y, inplace=False, set_instead_of_inc=False,
destroyhandler_tolerate_aliased
=
[[
0
,
1
]]
destroyhandler_tolerate_aliased
=
[[
0
,
1
]]
else
:
else
:
destroyhandler_tolerate_aliased
=
[]
destroyhandler_tolerate_aliased
=
[]
the_op
=
IncSubtensor
(
x
.
owner
.
op
.
idx_list
,
inplace
,
set_instead_of_inc
,
the_op
=
IncSubtensor
(
destroyhandler_tolerate_aliased
=
destroyhandler_tolerate_aliased
x
.
owner
.
op
.
idx_list
,
inplace
,
set_instead_of_inc
,
)
destroyhandler_tolerate_aliased
=
destroyhandler_tolerate_aliased
)
real_x
=
x
.
owner
.
inputs
[
0
]
real_x
=
x
.
owner
.
inputs
[
0
]
real_idxargs
=
x
.
owner
.
inputs
[
1
:]
real_idxargs
=
x
.
owner
.
inputs
[
1
:]
return
the_op
(
real_x
,
y
,
*
real_idxargs
)
return
the_op
(
real_x
,
y
,
*
real_idxargs
)
...
@@ -1105,10 +1106,10 @@ class IncSubtensor(Op):
...
@@ -1105,10 +1106,10 @@ class IncSubtensor(Op):
self
.
set_instead_of_inc
=
set_instead_of_inc
self
.
set_instead_of_inc
=
set_instead_of_inc
def
__eq__
(
self
,
other
):
def
__eq__
(
self
,
other
):
return
type
(
self
)
==
type
(
other
)
\
return
(
type
(
self
)
==
type
(
other
)
and
and
self
.
idx_list
==
other
.
idx_list
\
self
.
idx_list
==
other
.
idx_list
and
and
self
.
inplace
==
other
.
inplace
\
self
.
inplace
==
other
.
inplace
and
and
self
.
set_instead_of_inc
==
other
.
set_instead_of_inc
self
.
set_instead_of_inc
==
other
.
set_instead_of_inc
)
def
__hash__
(
self
):
def
__hash__
(
self
):
msg
=
[]
msg
=
[]
...
@@ -1120,12 +1121,12 @@ class IncSubtensor(Op):
...
@@ -1120,12 +1121,12 @@ class IncSubtensor(Op):
idx_list
=
tuple
(
msg
)
idx_list
=
tuple
(
msg
)
# backport
# backport
#idx_list = tuple((entry.start, entry.stop, entry.step)
#
idx_list = tuple((entry.start, entry.stop, entry.step)
# if isinstance(entry, slice)
# if isinstance(entry, slice)
# else entry
# else entry
# for entry in self.idx_list)
# for entry in self.idx_list)
return
hashtype
(
self
)
^
hash
(
idx_list
)
^
hash
(
self
.
inplace
)
\
return
(
hashtype
(
self
)
^
hash
(
idx_list
)
^
hash
(
self
.
inplace
)
^
^
hash
(
self
.
set_instead_of_inc
)
hash
(
self
.
set_instead_of_inc
)
)
def
__str__
(
self
):
def
__str__
(
self
):
indices
=
[]
indices
=
[]
...
@@ -1225,7 +1226,7 @@ class IncSubtensor(Op):
...
@@ -1225,7 +1226,7 @@ class IncSubtensor(Op):
if
not
self
.
set_instead_of_inc
:
if
not
self
.
set_instead_of_inc
:
sub_x
+=
y
sub_x
+=
y
else
:
else
:
#sub_x += -sub_x + y
#
sub_x += -sub_x + y
x
.
__setitem__
(
cdata
,
y
)
x
.
__setitem__
(
cdata
,
y
)
else
:
else
:
# scalar case
# scalar case
...
@@ -1295,7 +1296,7 @@ class IncSubtensor(Op):
...
@@ -1295,7 +1296,7 @@ class IncSubtensor(Op):
**
helper_args
**
helper_args
)
)
#Make a view on the output, as we will write into it.
#
Make a view on the output, as we will write into it.
alloc_zview
=
self
.
make_view_array
(
z
,
view_ndim
)
alloc_zview
=
self
.
make_view_array
(
z
,
view_ndim
)
build_view
=
"""
build_view
=
"""
...
@@ -1460,7 +1461,8 @@ class IncSubtensor(Op):
...
@@ -1460,7 +1461,8 @@ class IncSubtensor(Op):
gx
=
g_output
gx
=
g_output
gy
=
Subtensor
(
idx_list
=
self
.
idx_list
)(
g_output
,
*
idx_list
)
gy
=
Subtensor
(
idx_list
=
self
.
idx_list
)(
g_output
,
*
idx_list
)
if
gy
.
broadcastable
!=
y
.
broadcastable
:
if
gy
.
broadcastable
!=
y
.
broadcastable
:
y_broad
=
(
True
,)
*
(
gy
.
ndim
-
y
.
ndim
)
+
y
.
broadcastable
y_dim_added
=
gy
.
ndim
-
y
.
ndim
y_broad
=
(
True
,)
*
y_dim_added
+
y
.
broadcastable
assert
sum
(
gy
.
broadcastable
)
<
sum
(
y_broad
)
assert
sum
(
gy
.
broadcastable
)
<
sum
(
y_broad
)
axis_to_sum
=
[]
axis_to_sum
=
[]
for
i
in
range
(
gy
.
ndim
):
for
i
in
range
(
gy
.
ndim
):
...
@@ -1468,7 +1470,7 @@ class IncSubtensor(Op):
...
@@ -1468,7 +1470,7 @@ class IncSubtensor(Op):
axis_to_sum
.
append
(
i
)
axis_to_sum
.
append
(
i
)
elif
(
gy
.
broadcastable
[
i
]
is
True
and
elif
(
gy
.
broadcastable
[
i
]
is
True
and
y_broad
[
i
]
is
False
):
y_broad
[
i
]
is
False
):
# This mean that T
H
eano where able to infer that
# This mean that T
h
eano where able to infer that
# gy.shape[i] is 1, so y.shape[i] is 1, but we
# gy.shape[i] is 1, so y.shape[i] is 1, but we
# didn't know it. It is fine.
# didn't know it. It is fine.
pass
pass
...
@@ -1476,7 +1478,10 @@ class IncSubtensor(Op):
...
@@ -1476,7 +1478,10 @@ class IncSubtensor(Op):
assert
gy
.
broadcastable
[
i
]
==
y_broad
[
i
]
assert
gy
.
broadcastable
[
i
]
==
y_broad
[
i
]
gy
=
gy
.
sum
(
axis
=
axis_to_sum
,
keepdims
=
True
)
gy
=
gy
.
sum
(
axis
=
axis_to_sum
,
keepdims
=
True
)
if
gy
.
ndim
!=
y
.
ndim
:
if
gy
.
ndim
!=
y
.
ndim
:
gy
=
gy
.
dimshuffle
(
*
range
(
y
.
ndim
,
gy
.
ndim
))
assert
gy
.
ndim
>
y
.
ndim
for
i
in
range
(
y_dim_added
):
assert
gy
.
broadcastable
[
i
]
gy
=
gy
.
dimshuffle
(
*
range
(
y_dim_added
,
gy
.
ndim
))
assert
gy
.
broadcastable
==
y
.
broadcastable
assert
gy
.
broadcastable
==
y
.
broadcastable
return
[
gx
,
gy
]
+
[
DisconnectedType
()()]
*
len
(
idx_list
)
return
[
gx
,
gy
]
+
[
DisconnectedType
()()]
*
len
(
idx_list
)
...
@@ -1540,7 +1545,8 @@ class AdvancedSubtensor1(Op):
...
@@ -1540,7 +1545,8 @@ class AdvancedSubtensor1(Op):
if
not
numpy
.
can_cast
(
i
.
dtype
,
numpy
.
intp
):
if
not
numpy
.
can_cast
(
i
.
dtype
,
numpy
.
intp
):
# Check if there was actually an incorrect conversion
# Check if there was actually an incorrect conversion
if
numpy
.
any
(
i
!=
i_
):
if
numpy
.
any
(
i
!=
i_
):
raise
IndexError
(
'index contains values that are bigger '
raise
IndexError
(
'index contains values that are bigger '
'than the maximum array size on this system.'
,
i
)
'than the maximum array size on this system.'
,
i
)
i
=
i_
i
=
i_
...
@@ -1732,7 +1738,8 @@ class AdvancedIncSubtensor1(Op):
...
@@ -1732,7 +1738,8 @@ class AdvancedIncSubtensor1(Op):
opname
=
'set'
opname
=
'set'
else
:
else
:
opname
=
'increment'
opname
=
'increment'
raise
TypeError
(
'cannot
%
s x subtensor with ndim=
%
s'
raise
TypeError
(
'cannot
%
s x subtensor with ndim=
%
s'
' by y with ndim=
%
s to x subtensor with ndim=
%
s '
%
(
' by y with ndim=
%
s to x subtensor with ndim=
%
s '
%
(
opname
,
x_
.
type
.
ndim
,
y_
.
type
.
ndim
))
opname
,
x_
.
type
.
ndim
,
y_
.
type
.
ndim
))
...
@@ -1837,7 +1844,7 @@ def adv_index_broadcastable_pattern(a, idx):
...
@@ -1837,7 +1844,7 @@ def adv_index_broadcastable_pattern(a, idx):
newidx
=
tuple
(
map
(
replace_slice
,
idx
))
newidx
=
tuple
(
map
(
replace_slice
,
idx
))
#2 - True = 1; 2 - False = 2
#
2 - True = 1; 2 - False = 2
fakeshape
=
[
2
-
bc
for
bc
in
a
.
broadcastable
]
fakeshape
=
[
2
-
bc
for
bc
in
a
.
broadcastable
]
retshape
=
numpy
.
empty
(
fakeshape
)[
newidx
]
.
shape
retshape
=
numpy
.
empty
(
fakeshape
)[
newidx
]
.
shape
return
tuple
([
dim
==
1
for
dim
in
retshape
])
return
tuple
([
dim
==
1
for
dim
in
retshape
])
...
@@ -1902,8 +1909,6 @@ class AdvancedSubtensor(Op):
...
@@ -1902,8 +1909,6 @@ class AdvancedSubtensor(Op):
'are too big (>= 2^32 elements). It is possible that '
'are too big (>= 2^32 elements). It is possible that '
'out[0] (
%
s), with shape
%
s, is not correctly filled.'
'out[0] (
%
s), with shape
%
s, is not correctly filled.'
%
(
out
[
0
],
out
[
0
]
.
shape
))
%
(
out
[
0
],
out
[
0
]
.
shape
))
# return
#raise NotImplementedError()
def
connection_pattern
(
self
,
node
):
def
connection_pattern
(
self
,
node
):
...
@@ -1956,7 +1961,8 @@ class AdvancedIncSubtensor(Op):
...
@@ -1956,7 +1961,8 @@ class AdvancedIncSubtensor(Op):
def
__str__
(
self
):
def
__str__
(
self
):
return
"
%
s{
%
s,
%
s}"
%
(
self
.
__class__
.
__name__
,
return
"
%
s{
%
s,
%
s}"
%
(
self
.
__class__
.
__name__
,
"inplace="
+
str
(
self
.
inplace
),
"inplace="
+
str
(
self
.
inplace
),
" set_instead_of_inc="
+
str
(
self
.
set_instead_of_inc
))
" set_instead_of_inc="
+
str
(
self
.
set_instead_of_inc
))
def
make_node
(
self
,
x
,
y
,
*
inputs
):
def
make_node
(
self
,
x
,
y
,
*
inputs
):
x
=
theano
.
tensor
.
as_tensor_variable
(
x
)
x
=
theano
.
tensor
.
as_tensor_variable
(
x
)
...
@@ -1999,7 +2005,8 @@ class AdvancedIncSubtensor(Op):
...
@@ -1999,7 +2005,8 @@ class AdvancedIncSubtensor(Op):
return
gof
.
Apply
(
op
,
return
gof
.
Apply
(
op
,
(
x
,
y
)
+
inputs
,
(
x
,
y
)
+
inputs
,
[
theano
.
tensor
.
tensor
(
dtype
=
x
.
type
.
dtype
,
[
theano
.
tensor
.
tensor
(
dtype
=
x
.
type
.
dtype
,
broadcastable
=
x
.
type
.
broadcastable
)])
broadcastable
=
x
.
type
.
broadcastable
)])
def
perform
(
self
,
node
,
inputs
,
out_
):
def
perform
(
self
,
node
,
inputs
,
out_
):
...
...
theano/tensor/tests/test_inc_subtensor.py
浏览文件 @
53532957
...
@@ -100,30 +100,42 @@ class Test_inc_subtensor(unittest.TestCase):
...
@@ -100,30 +100,42 @@ class Test_inc_subtensor(unittest.TestCase):
sl2
=
slice
(
sl2_end
)
sl2
=
slice
(
sl2_end
)
sl3
=
2
sl3
=
2
for
do_set
in
[
True
,
False
]:
print
"Set"
,
do_set
if
do_set
:
resut
=
tt
.
set_subtensor
(
a
[
sl1
,
sl3
,
sl2
],
increment
)
else
:
resut
=
tt
.
inc_subtensor
(
a
[
sl1
,
sl3
,
sl2
],
increment
)
f
=
theano
.
function
([
a
,
increment
,
sl2_end
],
resut
)
val_a
=
numpy
.
ones
((
5
,
3
,
4
))
val_a
=
numpy
.
ones
((
5
,
3
,
4
))
val_inc
=
2.3
val_inc
=
2.3
val_sl2_end
=
2
val_sl2_end
=
2
for
method
in
[
tt
.
set_subtensor
,
tt
.
inc_subtensor
]:
print
"MethodSet"
,
method
resut
=
method
(
a
[
sl1
,
sl3
,
sl2
],
increment
)
f
=
theano
.
function
([
a
,
increment
,
sl2_end
],
resut
)
expected_result
=
numpy
.
copy
(
val_a
)
expected_result
=
numpy
.
copy
(
val_a
)
result
=
f
(
val_a
,
val_inc
,
val_sl2_end
)
result
=
f
(
val_a
,
val_inc
,
val_sl2_end
)
if
do_set
:
if
method
is
tt
.
set_subtensor
:
expected_result
[:,
sl3
,
:
val_sl2_end
]
=
val_inc
expected_result
[:,
sl3
,
:
val_sl2_end
]
=
val_inc
else
:
else
:
expected_result
[:,
sl3
,
:
val_sl2_end
]
+=
val_inc
expected_result
[:,
sl3
,
:
val_sl2_end
]
+=
val_inc
utt
.
assert_allclose
(
result
,
expected_result
)
utt
.
assert_allclose
(
result
,
expected_result
)
# Test when we broadcast the result
resut
=
method
(
a
[
sl1
,
sl2
],
increment
)
f
=
theano
.
function
([
a
,
increment
,
sl2_end
],
resut
)
expected_result
=
numpy
.
copy
(
val_a
)
result
=
f
(
val_a
,
val_inc
,
val_sl2_end
)
if
method
is
tt
.
set_subtensor
:
expected_result
[:,
:
val_sl2_end
]
=
val_inc
else
:
expected_result
[:,
:
val_sl2_end
]
+=
val_inc
utt
.
assert_allclose
(
result
,
expected_result
)
def
test_grad_inc_set
(
self
):
def
test_grad_inc_set
(
self
):
def
inc_slice
(
*
s
):
def
inc_slice
(
*
s
):
def
just_numeric_args
(
a
,
b
):
def
just_numeric_args
(
a
,
b
):
...
@@ -148,9 +160,14 @@ class Test_inc_subtensor(unittest.TestCase):
...
@@ -148,9 +160,14 @@ class Test_inc_subtensor(unittest.TestCase):
(
numpy
.
asarray
([[
0
,
1
],
[
2
,
3
],
[
4
,
5.
]]),
(
numpy
.
asarray
([[
0
,
1
],
[
2
,
3
],
[
4
,
5.
]]),
numpy
.
asarray
([[
9
,
9.
]]),
))
numpy
.
asarray
([[
9
,
9.
]]),
))
#single element
#
single element
utt
.
verify_grad
(
utt
.
verify_grad
(
f_slice
(
2
,
1
),
f_slice
(
2
,
1
),
(
numpy
.
asarray
([[
0
,
1
],
[
2
,
3
],
[
4
,
5.
]]),
(
numpy
.
asarray
([[
0
,
1
],
[
2
,
3
],
[
4
,
5.
]]),
numpy
.
asarray
(
9.
),))
numpy
.
asarray
(
9.
),))
# broadcast
utt
.
verify_grad
(
f_slice
(
2
),
(
numpy
.
asarray
([[
0
,
1
],
[
2
,
3
],
[
4
,
5.
]]),
numpy
.
asarray
(
9.
),))
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