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pytensor
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11d8cd9f
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11d8cd9f
authored
4月 23, 2012
作者:
David Warde-Farley
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电子邮件补丁
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English fixes/improvements to CentOS instructions.
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.. _install_centos6:
.. _install_centos6:
Easy Installation of
Theano optimized
on CentOS 6
Easy Installation of
an optimized Theano
on CentOS 6
=================================================
=================================================
===
.. note::
.. note::
It is possible to have a faster installation of Theano. But this
It is possible to have a faster installation of Theano than the one these
make the installation more complicated or request that you buy
instructions will provide, but this will make the installation more
software. So this is a simple installation instruction that give a
complicated and/or may require that you buy software. This is a simple set
relatively well optimized version that use only free
of installation instructions that will leave you with a relatively
software. With more work or with money, you can have a faster
well-optimized version that uses only free software. With more work or by
installation.
investing money (i.e. buying a license to a proprietary BLAS
implementation), it is possible to gain further performance.
The differences between those faster version are related to blas
libraries.
.. note::
.. note::
Th
is procedure make Theano use only 1 thread for all blas
Th
ese instructions will result in Theano using only 1 thread for all BLAS
function
. See note 1 about faster version. The other blas
function
calls. See the note above; other BLAS implementations can employ
libraries can work in parallel
.
multithreading to speed up computation
.
.. note::
.. note::
If you are under a proxy, you must do some extra configuration step
If you are behind a proxy, you must do some extra configuration steps
bedofore staring the installation. You must set the environment
before starting the installation. You must set the environment
variable ``http_proxy`` to the proxy like this under bash:
variable ``http_proxy`` to the proxy address. Using bash this is
accomplished with the command
``export http_proxy="http://user:pass@my.site:port/"``
``export http_proxy="http://user:pass@my.site:port/"``
You can also
giv
e the ``--proxy=[user:pass@]url:port`` parameter
You can also
provid
e the ``--proxy=[user:pass@]url:port`` parameter
to pip.
[user:pass@]
is optional.
to pip.
The ``[user:pass@]`` portion
is optional.
.. note::
.. note::
We use
pip for 2 reasons. First to allow "
import module;
We use
``pip`` for 2 reasons. First, it allows "``
import module;
module.test()
" to work correctly. Second, the installation of nump
y
module.test()
``" to work correctly. Second, the installation of NumP
y
1.6 or 1.6.1 with
easy_intall raise an import e
rror at the end of
1.6 or 1.6.1 with
``easy_install`` raises an ImportE
rror at the end of
the installation. To my knowledge we can ignore this error, but
the installation. To my knowledge we can ignore this error, but
this is not complet
ly safe. easy_install with numpy 1.5.1 don'
t
this is not complet
ely safe. ``easy_install`` with NumPy 1.5.1 does no
t
hav
e this error.
rais
e this error.
Installation step
Installation step
s
~~~~~~~~~~~~~~~~~
~~~~~~~~~~~~~~~~~
~
1) sudo yum install python-devel python-nose python-setuptools gcc
1)
``
sudo yum install python-devel python-nose python-setuptools gcc
gcc-gfortran gcc-c++ blas-devel lapack-devel atlas-devel
gcc-gfortran gcc-c++ blas-devel lapack-devel atlas-devel
``
2)
sudo easy_install pip
2)
``sudo easy_install pip``
3)
sudo pip install numpy==1.6.1
3)
``sudo pip install numpy==1.6.1``
4)
sudo pip install scipy==0.10.1
4)
``sudo pip install scipy==0.10.1``
5)
sudo pip install Theano
5)
``sudo pip install Theano``
Test
s newly installed package
Test
the newly installed packages
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
~~~~
1) Num
py (~30s): python -c "import numpy;numpy.test()"
1) Num
Py (~30s): ``python -c "import numpy; numpy.test()"``
2) Sci
py (~1m): python -c "import scipy;scipy.test()"
2) Sci
Py (~1m): ``python -c "import scipy; scipy.test()"``
3) Theano (~30m):
python -c "import theano;theano.test()"
3) Theano (~30m):
``python -c "import theano; theano.test()"``
Speed test Theano/B
las
Speed test Theano/B
LAS
~~~~~~~~~~~~~~~~~~~~~~
~~~~~~~~~~~~~~~~~~~~~~
It is recommended to test the Theano/Blas integration. There is many
It is recommended to test your Theano/BLAS integration. There are many versions
version of Blas that exist and there can be up to 10x speed
of BLAS that exist and there can be up to 10x speed difference between them.
difference. Also, having Theano link directly to blas instead of
Also, having Theano link directly against BLAS instead of using NumPy/SciPy as
using numpy/scipy as an intermediate lower the overhead. This is
an intermediate layer reduces the computational overhead. This is
important for blas call to ger, gemv and small gemm (automaticaled
important for BLAS calls to ``ger``, ``gemv`` and small ``gemm`` operations
when needed when you use dot()). To run Theano/Blas speed test:
(automatically called when needed when you use ``dot()``). To run the
Theano/BLAS speed test:
.. code-block:: bash
.. code-block:: bash
python /usr/lib/python2.*/site-packages/theano/misc/check_blas.py
python /usr/lib/python2.*/site-packages/theano/misc/check_blas.py
This will print a table with
with different version of blas/number
of
This will print a table with
different versions of BLAS/numbers
of
thread
on multiple CPUs and GPUs. It will also print some Theano/nump
y
thread
s on multiple CPUs and GPUs. It will also print some Theano/NumP
y
configuration
. Thenit will print the run time for your
configuration
information. Then, it will print the running time of the same
installation. Try to find a CPU close to yours and check if the
benchmarks for your installation. Try to find a CPU similar to yours in
t
imming is not too far
.
t
he table, and check that the single-threaded timings are roughly the same
.
Updating Theano
Updating Theano
~~~~~~~~~~~~~~~
~~~~~~~~~~~~~~~
If you followed th
is instruction installation, you can execute this to
If you followed th
ese installation instructions, you can execute this command
update only Theano:
to
update only Theano:
.. code-block:: bash
.. code-block:: bash
sudo pip install --upgrade --no-deps theano
sudo pip install --upgrade --no-deps theano
If you want to also update
numpy/scip
y, you can run this:
If you want to also update
NumPy/SciP
y, you can run this:
.. code-block:: bash
.. code-block:: bash
...
...
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