adding bunch of doc files i forgot to add before

doc/contents.txt

-
-.. _contents:
-
-========
-Contents
-========
-
-.. toctree::
-   :maxdepth: 1
-
-   introduction
-   LICENSE
-   install
-   tutorial/index
-   library/index
-   extending/index
-   indexes/index
-   glossary
-   links
-   internal/index
-   NEWS
-   examples/index
-   proposals/index
-

doc/index.txt

@@ -8,9 +8,9 @@ arrays efficiently. Theano features:
 
 * **tight integration with numpy**
 * **near-transparent use of a GPU** to accelerate for intense calculations [COMING].
-* symbolic differentiation
+* **symbolic differentiation**
 * **speed and stability optimizations**: write ``log(1+exp(x))`` and get the right answer.
-* dynamic C code generation for faster evaluation, including:
+* **dynamic C code generation** for faster evaluation
 
 Download
 ========

doc/library/config.txt

+.. _libdoc_config:
+
+========================================================
+:mod:`config` -- library configuration [doc TODO]
+========================================================
+
+
+use of THEANO_FLAGS
+
+
+what attributes are in here? 

doc/library/gof/index.txt

+
+.. _libdoc_gof:
+
+================================================
+:mod:`gof` -- theano internals [doc TODO]
+================================================

doc/library/gradient.txt

+.. _libdoc_gradient:
+
+==============================================================
+:mod:`gradient` -- symbolic differentiation [doc TODO]
+==============================================================
+

doc/library/index.txt

+
+.. _libdoc:
+
+=====================
+Library Documentation
+=====================
+
+This documentation covers Theano module-wise.
+
+.. toctree::
+   :maxdepth: 2
+
+   tensor/index
+   gradient
+   config
+   floatX
+   printing
+   compile/index
+   sparse/index
+   scalar/index
+   gof/index
+

doc/library/printing.txt

+.. _libdoc_printing:
+
+================================================================================
+:mod:`printing` -- graph printing and symbolic print statement [doc TODO]
+================================================================================
+

doc/library/scalar/index.txt

+
+.. _libdoc_scalar:
+
+==============================================================
+:mod:`scalar` -- symbolic scalar types, ops [doc TODO]
+==============================================================

doc/library/sparse/index.txt

+
+.. _libdoc_sparse:
+
+===========================================================
+:mod:`sparse` -- symbolic sparse matrices [doc TODO]
+===========================================================
+

doc/library/tensor/index.txt

+
+.. _libdoc_tensor:
+
+============================================================
+:mod:`tensor` -- types and ops for symbolic numpy [doc TODO]
+============================================================
+
+.. module:: theano.tensor
+   :platform: Unix, Windows
+   :synopsis: symbolic types and operations for n-dimensional arrays.
+.. moduleauthor:: LISA
+
+TODO: What does (or compatible) mean?  Talk about casting rules, refer .
+
+TensorType
+==========
+
+.. class:: TensorType
+
+   .. method:: quux()
+
+
+Creation
+========
+
+Autocasting
+-----------
+
+.. function:: as_tensor_variable(x, ...)
+
+    TODO: Link to 'autocasting'
+
+
+.. function:: lvector(name=None)
+
+TODO: make a table of all [scalar, vector, matrix, tensor3, tensor4] vs. [b,
+w, i, l, f, d, c, z]
+
+
+Shaping and Shuffling
+=====================
+
+.. function:: shape(x)
+
+    :param x:  symbolic Tensor (or compatible)
+
+    Returns the symbolic shape vector of `x`
+
+.. function:: reshape(x)
+
+.. function:: dimshuffle(x)
+
+
+Reductions 
+==========
+
+
+.. function:: max(x)
+
+    :param x:  symbolic Tensor (or compatible)
+
+    Returns TODO
+
+.. function:: min(x)
+
+    :param x:  symbolic Tensor (or compatible)
+
+    Returns TODO
+
+.. function:: sum(x)
+
+    :param x:  symbolic Tensor (or compatible)
+
+    Returns TODO
+
+Indexing
+========
+
+Basic indexing.
+
+Advanced indexing.
+
+Elementwise
+===========
+
+Casting
+-------
+
+Logic Functions
+---------------
+
+Mathematical
+------------
+
+Broadcasting in Theano vs. Numpy
+--------------------------------
+
+Random Sampling
+===============
+
+Linear Algebra
+==============
+
+Fourier Transforms
+==================
+
+[James has some code for this, but hasn't gotten it into the source tree yet.]
+
+
+

doc/proposals/index.txt

+
+.. _proposals:
+
+==================================
+Proposals for new/revised features
+==================================
+
+.. toctree::
+    :maxdepth: 1
+
+    pfunc
+    noupdates
+