
.. _pyCUDA:

******
PyCUDA
******

Introduction
------------

Authors: Andreas Klockner

- PyCUDA can access Nvidia's CUDA parallel computation API from Python
- Object cleanup tied to lifetime of objects (RAII, Resource Acquisition Is Initialization).

  - Makes it much easier to write correct, leak- and crash-free code
  - PyCUDA knows about dependencies (e.g.. it won't detach from a context before all memory allocated in it is also freed)

- Convenience

  - Abstractions to compile CUDA code from Python: ``pycuda.driver.SourceModule``
  - A GPU memory buffer: \texttt{pycuda.gpuarray.GPUArray}

- Completeness

  - Binding to all of CUDA's driver API

- Automatic Error Checking

  - All CUDA errors are automatically translated into Python exceptions

- Speed

  - PyCUDA's base layer is written in C++

- Helpful documentation


Example
-------

.. code-block:: python

  import pycuda.autoinit
  import pycuda.driver as drv
  import numpy

  from pycuda.compiler import SourceModule
  mod = SourceModule("""
  __global__ void multiply_them(float *dest, float *a, float *b)
  {
    const int i = threadIdx.x;
    dest[i] = a[i] * b[i];
  }
  """)

  multiply_them = mod.get_function("multiply_them")

  a = numpy.random.randn(400).astype(numpy.float32)
  b = numpy.random.randn(400).astype(numpy.float32)

  dest = numpy.zeros_like(a)
  multiply_them(
          drv.Out(dest), drv.In(a), drv.In(b),
          block=(400,1,1), grid=(1,1))

  assert numpy.allclose(dest, a*b)
  print dest


Exercise 6
----------

- Run the above example
- Modify and execute it to work for a matrix of 20 x 10


.. _cifar2011_pyCUDA_theano:

Theano + PyCUDA
---------------

.. testcode::

    import numpy, theano
    import theano.misc.pycuda_init
    from pycuda.compiler import SourceModule
    import theano.sandbox.cuda as cuda
    from theano.graph.basic import Apply
    from theano.graph.op import Op


    class PyCUDADoubleOp(Op):
        def make_node(self, inp):
            inp = cuda.basic_ops.gpu_contiguous(
               cuda.basic_ops.as_cuda_ndarray_variable(inp))
            assert inp.dtype == "float32"
            return Apply(self, [inp], [inp.type()])
        def make_thunk(self, node, storage_map, _, _2):
            mod = SourceModule("""
        __global__ void my_fct(float * i0, float * o0, int size) {
        int i = blockIdx.x*blockDim.x + threadIdx.x;
        if(i<size){
            o0[i] = i0[i]*2;
        }
      }""")
            pycuda_fct = mod.get_function("my_fct")
            inputs = [ storage_map[v] for v in node.inputs]
            outputs = [ storage_map[v] for v in node.outputs]
            def thunk():
                z = outputs[0]
                if z[0] is None or z[0].shape!=inputs[0][0].shape:
                    z[0] = cuda.CudaNdarray.zeros(inputs[0][0].shape)
                grid = (int(numpy.ceil(inputs[0][0].size / 512.)),1)
                pycuda_fct(inputs[0][0], z[0], numpy.intc(inputs[0][0].size),
                           block=(512,1,1), grid=grid)
            return thunk

.. testoutput::
   :hide:
   :options: +SKIP

   This contains GPU code so skip it

Test it!

>>> x = theano.tensor.fmatrix() # doctest: +SKIP
>>> f = theano.function([x], PyCUDADoubleOp()(x)) # doctest: +SKIP
>>> xv=numpy.ones((4,5), dtype="float32") # doctest: +SKIP
>>> assert numpy.allclose(f(xv), xv*2) # doctest: +SKIP
>>> print numpy.asarray(f(xv)) # doctest: +SKIP

Exercises 7
-----------

- Run the above example
- Modify and execute the example to multiple two matrix: x * y
- Modify and execute the example to return 2 outputs: x + y and x - y

  - Our current elemwise fusion generate computation with only 1 outputs

- Modify and execute the example to support stride? (Don't force the input to be c contiguous)
